RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 H3BMM0 161 aa6.78□□□□□ -1.32
CTNND1-225ENST00000530094 GAGE2EQ4V326 116 aa6.78□□□□□ -1.32
CTNND1-225ENST00000530094 TMEM243Q9BU79 118 aa6.78□□□□□ -1.32
CTNND1-225ENST00000530094 GAGE2DQ9UEU5 116 aa6.78□□□□□ -1.32
CTNND1-225ENST00000530094 RNF144BQ7Z419 303 aa6.78□□□□□ -1.32
CTNND1-225ENST00000530094 LHFPL4Q7Z7J7 247 aa6.78□□□□□ -1.32
CTNND1-225ENST00000530094 DOCK10Q96BY6 2186 aa6.78□□□□□ -1.32
CTNND1-225ENST00000530094 CDKN1BP46527 198 aa6.78□□□□□ -1.32
CTNND1-225ENST00000530094 RPL32P62910 135 aaKnown RBP6.78□□□□□ -1.32
CTNND1-225ENST00000530094 KAAG1Q9UBP8 84 aa6.78□□□□□ -1.32
CTNND1-225ENST00000530094 A0A087WWL8 130 aa6.77□□□□□ -1.32
CTNND1-225ENST00000530094 FHL1Q13642 323 aa6.77□□□□□ -1.32
CTNND1-225ENST00000530094 DLX4Q92988 240 aaPredicted RBP6.77□□□□□ -1.32
CTNND1-225ENST00000530094 SPAG8Q99932 426 aaPredicted RBP6.77□□□□□ -1.32
CTNND1-225ENST00000530094 XCL2Q9UBD3 114 aa6.77□□□□□ -1.32
CTNND1-225ENST00000530094 ALPK3Q96L96 1907 aa6.77□□□□□ -1.33
CTNND1-225ENST00000530094 TNFRSF6BO95407 300 aa6.77□□□□□ -1.33
CTNND1-225ENST00000530094 IGKV1-16P04430 117 aa6.77□□□□□ -1.33
CTNND1-225ENST00000530094 LOXP28300 417 aaPredicted RBP6.77□□□□□ -1.33
CTNND1-225ENST00000530094 RIPPLY3P57055 190 aa6.77□□□□□ -1.33
CTNND1-225ENST00000530094 TCTEX1D4Q5JR98 221 aa6.77□□□□□ -1.33
CTNND1-225ENST00000530094 NDUFS7O75251 213 aa6.77□□□□□ -1.33
CTNND1-225ENST00000530094 Q8N8P6 123 aa6.77□□□□□ -1.33
CTNND1-225ENST00000530094 THAP8Q8NA92 274 aa6.77□□□□□ -1.33
CTNND1-225ENST00000530094 HS3ST6Q96QI5 342 aa6.77□□□□□ -1.33
CTNND1-225ENST00000530094 KLF2Q9Y5W3 355 aaPredicted RBP6.77□□□□□ -1.33
CTNND1-225ENST00000530094 IGLV3-9A0A075B6K5 115 aa6.77□□□□□ -1.33
CTNND1-225ENST00000530094 VWC2Q2TAL6 325 aa6.77□□□□□ -1.33
CTNND1-225ENST00000530094 C2orf82Q6UX34 121 aa6.77□□□□□ -1.33
CTNND1-225ENST00000530094 HIST1H2BLQ99880 126 aa6.77□□□□□ -1.33
CTNND1-225ENST00000530094 EDA2RQ9HAV5 297 aa6.77□□□□□ -1.33
CTNND1-225ENST00000530094 PTPN13Q12923 2485 aa6.77□□□□□ -1.33
CTNND1-225ENST00000530094 TRBV19A0A075B6N1 114 aa6.77□□□□□ -1.33
CTNND1-225ENST00000530094 H3BRN7 92 aa6.77□□□□□ -1.33
CTNND1-225ENST00000530094 DMRTC2Q8IXT2 367 aaPredicted RBP6.77□□□□□ -1.33
CTNND1-225ENST00000530094 BCL6BQ8N143 479 aaPredicted RBP6.77□□□□□ -1.33
CTNND1-225ENST00000530094 HIST3H2BBQ8N257 126 aa6.77□□□□□ -1.33
CTNND1-225ENST00000530094 ATP6V0BQ99437 205 aa6.77□□□□□ -1.33
CTNND1-225ENST00000530094 TMEM256Q8N2U0 113 aa6.76□□□□□ -1.33
CTNND1-225ENST00000530094 IGF2RP11717 2491 aa6.76□□□□□ -1.33
CTNND1-225ENST00000530094 YLPM1P49750 1951 aaKnown RBP6.76□□□□□ -1.33
CTNND1-225ENST00000530094 IGHV7-4-1A0A0J9YVY3 117 aa6.76□□□□□ -1.33
CTNND1-225ENST00000530094 GAGE12JA6NER3 117 aa6.76□□□□□ -1.33
CTNND1-225ENST00000530094 SYS1-DBNDD2H3BUS1 97 aa6.76□□□□□ -1.33
CTNND1-225ENST00000530094 ADORA2A-AS1P86434 159 aa6.76□□□□□ -1.33
CTNND1-225ENST00000530094 GAGE1Q13065 139 aa6.76□□□□□ -1.33
CTNND1-225ENST00000530094 GAGE4Q13068 117 aa6.76□□□□□ -1.33
CTNND1-225ENST00000530094 GAGE5Q13069 117 aa6.76□□□□□ -1.33
CTNND1-225ENST00000530094 RBMY1FQ15415 496 aaKnown RBP6.76□□□□□ -1.33
CTNND1-225ENST00000530094 GUSBP1Q15486 140 aa6.76□□□□□ -1.33
CTNND1-225ENST00000530094 C8orf86Q6ZUL3 223 aa6.76□□□□□ -1.33
CTNND1-225ENST00000530094 C5orf24Q7Z6I8 188 aa6.76□□□□□ -1.33
CTNND1-225ENST00000530094 NRGNQ92686 78 aa6.76□□□□□ -1.33
CTNND1-225ENST00000530094 SNHG12Q9BXW3 62 aa6.76□□□□□ -1.33
CTNND1-225ENST00000530094 PLXNB3Q9ULL4 1909 aa6.76□□□□□ -1.33
CTNND1-225ENST00000530094 DKK1O94907 266 aa6.76□□□□□ -1.33
CTNND1-225ENST00000530094 ESDP10768 282 aa6.76□□□□□ -1.33
CTNND1-225ENST00000530094 SIGMAR1Q99720 223 aa6.76□□□□□ -1.33
CTNND1-225ENST00000530094 PRORYQ9H606 182 aa6.76□□□□□ -1.33
CTNND1-225ENST00000530094 SELENOKQ9Y6D0 94 aa6.76□□□□□ -1.33
CTNND1-225ENST00000530094 SSBP2P81877 361 aaPredicted RBP6.76□□□□□ -1.33
CTNND1-225ENST00000530094 C17orf58Q2M2W7 97 aa6.76□□□□□ -1.33
CTNND1-225ENST00000530094 SPANXDQ9BXN6 97 aa6.76□□□□□ -1.33
CTNND1-225ENST00000530094 VPREB3Q9UKI3 123 aa6.76□□□□□ -1.33
CTNND1-225ENST00000530094 ABCA1O95477 2261 aa6.76□□□□□ -1.33
CTNND1-225ENST00000530094 Q6ZR03 302 aa6.75□□□□□ -1.33
CTNND1-225ENST00000530094 NPC2P61916 151 aa6.75□□□□□ -1.33
CTNND1-225ENST00000530094 C9orf66Q5T8R8 295 aa6.75□□□□□ -1.33
CTNND1-225ENST00000530094 ATRAIDQ6UW56 229 aa6.75□□□□□ -1.33
CTNND1-225ENST00000530094 MRPL53Q96EL3 112 aaKnown RBP6.75□□□□□ -1.33
CTNND1-225ENST00000530094 ANAPC13Q9BS18 74 aa6.75□□□□□ -1.33
CTNND1-225ENST00000530094 RSPO3Q9BXY4 272 aaPredicted RBP6.75□□□□□ -1.33
CTNND1-225ENST00000530094 TMEM126AQ9H061 195 aa6.75□□□□□ -1.33
CTNND1-225ENST00000530094 ZNF134P52741 427 aa6.75□□□□□ -1.33
CTNND1-225ENST00000530094 PAX9P55771 341 aa6.75□□□□□ -1.33
CTNND1-225ENST00000530094 PMVKQ15126 192 aa6.75□□□□□ -1.33
CTNND1-225ENST00000530094 SPINK13Q1W4C9 94 aa6.75□□□□□ -1.33
CTNND1-225ENST00000530094 IGFL4Q6B9Z1 124 aa6.75□□□□□ -1.33
CTNND1-225ENST00000530094 FOXI2Q6ZQN5 318 aa6.75□□□□□ -1.33
CTNND1-225ENST00000530094 ZNF581Q9P0T4 197 aa6.75□□□□□ -1.33
CTNND1-225ENST00000530094 AMN1Q8IY45 258 aa6.75□□□□□ -1.33
CTNND1-225ENST00000530094 WISP2O76076 250 aa6.74□□□□□ -1.33
CTNND1-225ENST00000530094 CXCL1P09341 107 aa6.74□□□□□ -1.33
CTNND1-225ENST00000530094 SFTA2Q6UW10 78 aa6.74□□□□□ -1.33
CTNND1-225ENST00000530094 RNF152Q8N8N0 203 aa6.74□□□□□ -1.33
CTNND1-225ENST00000530094 DKK4Q9UBT3 224 aa6.74□□□□□ -1.33
CTNND1-225ENST00000530094 TP53TG1Q9Y2A0 90 aa6.74□□□□□ -1.33
CTNND1-225ENST00000530094 MEGF9Q9H1U4 602 aa6.74□□□□□ -1.33
CTNND1-225ENST00000530094 PTPRSQ13332 1948 aa6.74□□□□□ -1.33
CTNND1-225ENST00000530094 IGHV2-5P01817 119 aa6.74□□□□□ -1.33
CTNND1-225ENST00000530094 DEFB113Q30KQ7 82 aa6.74□□□□□ -1.33
CTNND1-225ENST00000530094 SH2D6Q7Z4S9 175 aa6.74□□□□□ -1.33
CTNND1-225ENST00000530094 Q8NA96 180 aa6.74□□□□□ -1.33
CTNND1-225ENST00000530094 PCDH15Q96QU1 1955 aa6.74□□□□□ -1.33
CTNND1-225ENST00000530094 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.74□□□□□ -1.33
CTNND1-225ENST00000530094 INAFM2P0DMQ5 153 aa6.74□□□□□ -1.33
CTNND1-225ENST00000530094 CGB3P0DN86 165 aa6.74□□□□□ -1.33
CTNND1-225ENST00000530094 HIST1H4AP62805 103 aaKnown RBP6.74□□□□□ -1.33
CTNND1-225ENST00000530094 FAM104BQ5XKR9 115 aa6.74□□□□□ -1.33
CTNND1-225ENST00000530094 GAGE12BA1L429 117 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms