RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 ZNF266Q14584 549 aa12.47□□□□□ -0.41
NR1H3-228ENST00000525441 ACOT6Q3I5F7 207 aaPredicted RBP12.47□□□□□ -0.41
NR1H3-228ENST00000525441 LGALSLQ3ZCW2 172 aaPredicted RBP12.47□□□□□ -0.41
NR1H3-228ENST00000525441 CCDC28AQ8IWP9 274 aa12.47□□□□□ -0.41
NR1H3-228ENST00000525441 PLA2G2EQ9NZK7 142 aa12.47□□□□□ -0.41
NR1H3-228ENST00000525441 HTN3P15516 51 aa12.46□□□□□ -0.41
NR1H3-228ENST00000525441 UBE2L3P68036 154 aaKnown RBP12.46□□□□□ -0.41
NR1H3-228ENST00000525441 FAM122CQ6P4D5 195 aa12.46□□□□□ -0.41
NR1H3-228ENST00000525441 C9orf62Q8N4C0 152 aa12.46□□□□□ -0.41
NR1H3-228ENST00000525441 TMEM263Q8WUH6 116 aaKnown RBP12.46□□□□□ -0.41
NR1H3-228ENST00000525441 A0A1W2PPV4 95 aa12.45□□□□□ -0.42
NR1H3-228ENST00000525441 J3KRW8 73 aa12.45□□□□□ -0.42
NR1H3-228ENST00000525441 SLC25A5P05141 298 aaKnown RBP12.45□□□□□ -0.42
NR1H3-228ENST00000525441 M6PRP20645 277 aa12.45□□□□□ -0.42
NR1H3-228ENST00000525441 CSN1S1P47710 185 aa12.45□□□□□ -0.42
NR1H3-228ENST00000525441 ERCC8Q13216 396 aa12.45□□□□□ -0.42
NR1H3-228ENST00000525441 KIR3DS1Q14943 382 aa12.45□□□□□ -0.42
NR1H3-228ENST00000525441 TMEM78Q5T7P6 136 aa12.45□□□□□ -0.42
NR1H3-228ENST00000525441 TMUB2Q71RG4 321 aa12.45□□□□□ -0.42
NR1H3-228ENST00000525441 LYPD1Q8N2G4 141 aa12.45□□□□□ -0.42
NR1H3-228ENST00000525441 ARPC5LQ9BPX5 153 aa12.45□□□□□ -0.42
NR1H3-228ENST00000525441 TIMM8BQ9Y5J9 83 aaPredicted RBP12.45□□□□□ -0.42
NR1H3-228ENST00000525441 PLAC8L1A1L4L8 177 aa12.44□□□□□ -0.42
NR1H3-228ENST00000525441 DEFB130BP0DP73 79 aa12.44□□□□□ -0.42
NR1H3-228ENST00000525441 DEFB130AP0DP74 79 aa12.44□□□□□ -0.42
NR1H3-228ENST00000525441 C9orf47Q6ZRZ4 202 aa12.44□□□□□ -0.42
NR1H3-228ENST00000525441 PHYHIPLQ96FC7 376 aa12.44□□□□□ -0.42
NR1H3-228ENST00000525441 AGPAT4-IT1Q9H0P7 198 aa12.44□□□□□ -0.42
NR1H3-228ENST00000525441 TRAV12-3A0A0B4J271 114 aa12.43□□□□□ -0.42
NR1H3-228ENST00000525441 KANTRA0A1W2PQU2 76 aa12.43□□□□□ -0.42
NR1H3-228ENST00000525441 C7orf71A4D174 169 aa12.43□□□□□ -0.42
NR1H3-228ENST00000525441 BCL2L11O43521 198 aa12.43□□□□□ -0.42
NR1H3-228ENST00000525441 P0DMU3 169 aa12.43□□□□□ -0.42
NR1H3-228ENST00000525441 FAM231AP0DMU4 169 aa12.43□□□□□ -0.42
NR1H3-228ENST00000525441 FAM231CP0DMU5 169 aa12.43□□□□□ -0.42
NR1H3-228ENST00000525441 NKX2-5P52952 324 aaPredicted RBP12.43□□□□□ -0.42
NR1H3-228ENST00000525441 RANP62826 216 aaKnown RBP12.43□□□□□ -0.42
NR1H3-228ENST00000525441 RNASE8Q8TDE3 154 aaKnown RBP12.43□□□□□ -0.42
NR1H3-228ENST00000525441 ZNF503Q96F45 646 aa12.43□□□□□ -0.42
NR1H3-228ENST00000525441 PYGO2Q9BRQ0 406 aa12.43□□□□□ -0.42
NR1H3-228ENST00000525441 CYTL1Q9NRR1 136 aa12.43□□□□□ -0.42
NR1H3-228ENST00000525441 IGKV2-40A0A087WW87 121 aaPredicted RBP12.42□□□□□ -0.42
NR1H3-228ENST00000525441 BORCS7-ASMTA0A0B4J1R7 106 aa12.42□□□□□ -0.42
NR1H3-228ENST00000525441 IGKV2D-40P01614 121 aaPredicted RBP12.42□□□□□ -0.42
NR1H3-228ENST00000525441 NMBP08949 121 aa12.42□□□□□ -0.42
NR1H3-228ENST00000525441 PQLC2Q6ZP29 291 aa12.42□□□□□ -0.42
NR1H3-228ENST00000525441 HSD17B11Q8NBQ5 300 aa12.42□□□□□ -0.42
NR1H3-228ENST00000525441 FAM19A4Q96LR4 140 aa12.42□□□□□ -0.42
NR1H3-228ENST00000525441 Q9H3A6 140 aa12.42□□□□□ -0.42
NR1H3-228ENST00000525441 KLLNB2CW77 178 aa12.41□□□□□ -0.42
NR1H3-228ENST00000525441 GPX1P07203 203 aa12.41□□□□□ -0.42
NR1H3-228ENST00000525441 CRISP2P16562 243 aa12.41□□□□□ -0.42
NR1H3-228ENST00000525441 RAB2AP61019 212 aa12.41□□□□□ -0.42
NR1H3-228ENST00000525441 RPL7L1Q6DKI1 246 aaKnown RBP12.41□□□□□ -0.42
NR1H3-228ENST00000525441 OR10G4Q8NGN3 311 aa12.41□□□□□ -0.42
NR1H3-228ENST00000525441 OR10G9Q8NGN4 311 aa12.41□□□□□ -0.42
NR1H3-228ENST00000525441 OR10G7Q8NGN6 311 aa12.41□□□□□ -0.42
NR1H3-228ENST00000525441 OR2G3Q8NGZ4 309 aa12.41□□□□□ -0.42
NR1H3-228ENST00000525441 RXFP4Q8TDU9 374 aa12.41□□□□□ -0.42
NR1H3-228ENST00000525441 VGLL1Q99990 258 aa12.41□□□□□ -0.42
NR1H3-228ENST00000525441 PSMG3Q9BT73 122 aaPredicted RBP12.41□□□□□ -0.42
NR1H3-228ENST00000525441 NOP10Q9NPE3 64 aaKnown RBP12.41□□□□□ -0.42
NR1H3-228ENST00000525441 RBAKDNA6NC62 111 aa12.4□□□□□ -0.42
NR1H3-228ENST00000525441 CBY3A6NI87 242 aa12.4□□□□□ -0.42
NR1H3-228ENST00000525441 SNURFLB1AK76 121 aa12.4□□□□□ -0.42
NR1H3-228ENST00000525441 MBP02144 154 aa12.4□□□□□ -0.42
NR1H3-228ENST00000525441 ATP5G1P05496 136 aa12.4□□□□□ -0.42
NR1H3-228ENST00000525441 RNASE4P34096 147 aaKnown RBP12.4□□□□□ -0.42
NR1H3-228ENST00000525441 ATP5G3P48201 142 aa12.4□□□□□ -0.42
NR1H3-228ENST00000525441 ZNF138P52744 262 aa12.4□□□□□ -0.42
NR1H3-228ENST00000525441 FAM74A1Q5RGS3 127 aa12.4□□□□□ -0.42
NR1H3-228ENST00000525441 ZNF492Q9P255 531 aa12.4□□□□□ -0.42
NR1H3-228ENST00000525441 TRBV7-9A0A0J9YWB2 115 aa12.39□□□□□ -0.43
NR1H3-228ENST00000525441 ATP6V0CP27449 155 aa12.39□□□□□ -0.43
NR1H3-228ENST00000525441 CDC34P49427 236 aaPredicted RBP12.39□□□□□ -0.43
NR1H3-228ENST00000525441 SERF2P84101 59 aa12.39□□□□□ -0.43
NR1H3-228ENST00000525441 TMEM88Q6PEY1 159 aa12.39□□□□□ -0.43
NR1H3-228ENST00000525441 POM121L12Q8N7R1 296 aa12.39□□□□□ -0.43
NR1H3-228ENST00000525441 OTORQ9NRC9 128 aa12.39□□□□□ -0.43
NR1H3-228ENST00000525441 F5H768 121 aa12.38□□□□□ -0.43
NR1H3-228ENST00000525441 BTN1A1Q13410 526 aa12.38□□□□□ -0.43
NR1H3-228ENST00000525441 C15orf53Q8NAA6 179 aa12.38□□□□□ -0.43
NR1H3-228ENST00000525441 ZNF680Q8NEM1 530 aa12.38□□□□□ -0.43
NR1H3-228ENST00000525441 STOML3Q8TAV4 291 aa12.38□□□□□ -0.43
NR1H3-228ENST00000525441 CMTM2Q8TAZ6 248 aa12.38□□□□□ -0.43
NR1H3-228ENST00000525441 LINC00467Q9BRT7 94 aa12.38□□□□□ -0.43
NR1H3-228ENST00000525441 ZNF471Q9BX82 626 aaPredicted RBP12.38□□□□□ -0.43
NR1H3-228ENST00000525441 VPS13DQ5THJ4 4388 aa12.37□□□□□ -0.43
NR1H3-228ENST00000525441 DIRC3C9JPN6 131 aa12.37□□□□□ -0.43
NR1H3-228ENST00000525441 ZNF324O75467 553 aaPredicted RBP12.37□□□□□ -0.43
NR1H3-228ENST00000525441 EIF3GO75821 320 aaKnown RBP eCLIP12.37□□□□□ -0.43
NR1H3-228ENST00000525441 EIF5AP63241 154 aaKnown RBP12.37□□□□□ -0.43
NR1H3-228ENST00000525441 SLC51BQ86UW2 128 aa12.37□□□□□ -0.43
NR1H3-228ENST00000525441 UBE2DNLQ8IWF7 75 aa12.37□□□□□ -0.43
NR1H3-228ENST00000525441 EIF4E3Q8N5X7 224 aaKnown RBP12.37□□□□□ -0.43
NR1H3-228ENST00000525441 ZFAND2AQ8N6M9 145 aa12.37□□□□□ -0.43
NR1H3-228ENST00000525441 GNPNAT1Q96EK6 184 aaPredicted RBP12.37□□□□□ -0.43
NR1H3-228ENST00000525441 PGPA6NDG6 321 aa12.36□□□□□ -0.43
NR1H3-228ENST00000525441 ANXA2RQ3ZCQ2 193 aa12.36□□□□□ -0.43
NR1H3-228ENST00000525441 ARL6IP6Q8N6S5 226 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms