RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 RIIAD1A6NNX1 92 aa0.6□□□□□ -2.31
CD44-215ENST00000525241 ZNF736B4DX44 427 aaPredicted RBP0.6□□□□□ -2.31
CD44-215ENST00000525241 AIPO00170 330 aa0.6□□□□□ -2.31
CD44-215ENST00000525241 HYPMO75409 117 aa0.6□□□□□ -2.31
CD44-215ENST00000525241 PROSCO94903 275 aa0.6□□□□□ -2.31
CD44-215ENST00000525241 NDUFC2O95298 119 aa0.6□□□□□ -2.31
CD44-215ENST00000525241 NFYBP25208 207 aa0.6□□□□□ -2.31
CD44-215ENST00000525241 GLRXP35754 106 aa0.6□□□□□ -2.31
CD44-215ENST00000525241 DSCR4P56555 118 aaPredicted RBP0.6□□□□□ -2.31
CD44-215ENST00000525241 BCL2L15Q5TBC7 163 aa0.6□□□□□ -2.31
CD44-215ENST00000525241 TEX47Q8TBZ9 253 aa0.6□□□□□ -2.31
CD44-215ENST00000525241 SLC25A21Q9BQT8 299 aaPredicted RBP0.6□□□□□ -2.31
CD44-215ENST00000525241 OR2J1Q9GZK6 312 aa0.6□□□□□ -2.31
CD44-215ENST00000525241 TAF9BQ9HBM6 251 aa0.6□□□□□ -2.31
CD44-215ENST00000525241 GID8Q9NWU2 228 aa0.6□□□□□ -2.31
CD44-215ENST00000525241 OR52A1Q9UKL2 312 aa0.6□□□□□ -2.31
CD44-215ENST00000525241 KLK9Q9UKQ9 250 aa0.6□□□□□ -2.31
CD44-215ENST00000525241 SSR3Q9UNL2 185 aa0.6□□□□□ -2.31
CD44-215ENST00000525241 RNF11Q9Y3C5 154 aa0.6□□□□□ -2.31
CD44-215ENST00000525241 BAZ1AQ9NRL2 1556 aaPredicted RBP0.6□□□□□ -2.31
CD44-215ENST00000525241 ANK1P16157 1881 aa0.6□□□□□ -2.31
CD44-215ENST00000525241 PRUNE2Q8WUY3 3088 aa0.6□□□□□ -2.31
CD44-215ENST00000525241 WDR97A6NE52 1622 aa0.6□□□□□ -2.31
CD44-215ENST00000525241 FAT3Q8TDW7 4589 aa0.59□□□□□ -2.31
CD44-215ENST00000525241 MUC12Q9UKN1 5478 aa0.59□□□□□ -2.31
CD44-215ENST00000525241 F8P00451 2351 aa0.59□□□□□ -2.31
CD44-215ENST00000525241 TRAV5A0A0B4J249 113 aa0.59□□□□□ -2.31
CD44-215ENST00000525241 E7EUB6 86 aa0.59□□□□□ -2.31
CD44-215ENST00000525241 H7BYZ3 331 aa0.59□□□□□ -2.31
CD44-215ENST00000525241 GPR31O00270 319 aa0.59□□□□□ -2.31
CD44-215ENST00000525241 BANF1O75531 89 aa0.59□□□□□ -2.31
CD44-215ENST00000525241 CXCL1P09341 107 aa0.59□□□□□ -2.31
CD44-215ENST00000525241 KRTAP2-3P0C7H8 128 aa0.59□□□□□ -2.31
CD44-215ENST00000525241 SERPINB1P30740 379 aa0.59□□□□□ -2.31
CD44-215ENST00000525241 B2MP61769 119 aa0.59□□□□□ -2.31
CD44-215ENST00000525241 SCGB2B2Q4G0G5 96 aa0.59□□□□□ -2.31
CD44-215ENST00000525241 C1orf134Q5TEV5 83 aa0.59□□□□□ -2.31
CD44-215ENST00000525241 C1orf140Q5VVS0 124 aa0.59□□□□□ -2.31
CD44-215ENST00000525241 PRR15Q8IV56 129 aa0.59□□□□□ -2.31
CD44-215ENST00000525241 ST6GALNAC3Q8NDV1 305 aa0.59□□□□□ -2.31
CD44-215ENST00000525241 ZC2HC1AQ96GY0 325 aa0.59□□□□□ -2.31
CD44-215ENST00000525241 NPCDR1Q9BY65 106 aa0.59□□□□□ -2.31
CD44-215ENST00000525241 KRTAP2-4Q9BYR9 128 aa0.59□□□□□ -2.31
CD44-215ENST00000525241 BIN3Q9NQY0 253 aa0.59□□□□□ -2.31
CD44-215ENST00000525241 MED12Q93074 2177 aa0.59□□□□□ -2.32
CD44-215ENST00000525241 TRPM7Q96QT4 1865 aa0.58□□□□□ -2.32
CD44-215ENST00000525241 TRAPPC8Q9Y2L5 1435 aa0.58□□□□□ -2.32
CD44-215ENST00000525241 PPP5D1E7EU14 171 aa0.58□□□□□ -2.32
CD44-215ENST00000525241 K7ERJ3 54 aa0.58□□□□□ -2.32
CD44-215ENST00000525241 CCL16O15467 120 aa0.58□□□□□ -2.32
CD44-215ENST00000525241 FABP1P07148 127 aa0.58□□□□□ -2.32
CD44-215ENST00000525241 OGNP20774 298 aaKnown RBP0.58□□□□□ -2.32
CD44-215ENST00000525241 ARPP19P56211 112 aa0.58□□□□□ -2.32
CD44-215ENST00000525241 SPRNQ5BIV9 151 aa0.58□□□□□ -2.32
CD44-215ENST00000525241 FKBP1CQ5VVH2 108 aa0.58□□□□□ -2.32
CD44-215ENST00000525241 TMEM14EPQ6UXP3 125 aa0.58□□□□□ -2.32
CD44-215ENST00000525241 Q8TAT8 98 aa0.58□□□□□ -2.32
CD44-215ENST00000525241 PSMF1Q92530 271 aa0.58□□□□□ -2.32
CD44-215ENST00000525241 POP5Q969H6 163 aaKnown RBP0.58□□□□□ -2.32
CD44-215ENST00000525241 MALSU1Q96EH3 234 aa0.58□□□□□ -2.32
CD44-215ENST00000525241 POPDC3Q9HBV1 291 aa0.58□□□□□ -2.32
CD44-215ENST00000525241 OTORQ9NRC9 128 aa0.58□□□□□ -2.32
CD44-215ENST00000525241 TCOF1Q13428 1488 aaKnown RBP0.58□□□□□ -2.32
CD44-215ENST00000525241 KMT2AQ03164 3969 aa0.58□□□□□ -2.32
CD44-215ENST00000525241 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.58□□□□□ -2.32
CD44-215ENST00000525241 RTL9Q8NET4 1388 aa0.57□□□□□ -2.32
CD44-215ENST00000525241 SYNJ1O43426 1573 aa0.57□□□□□ -2.32
CD44-215ENST00000525241 KDM6AO15550 1401 aaPredicted RBP0.57□□□□□ -2.32
CD44-215ENST00000525241 DCHS2Q6V1P9 2916 aa0.57□□□□□ -2.32
CD44-215ENST00000525241 CTTNBP2Q8WZ74 1663 aa0.57□□□□□ -2.32
CD44-215ENST00000525241 SHANK2Q9UPX8 1470 aa0.57□□□□□ -2.32
CD44-215ENST00000525241 TRBV6-4A0A1B0GX49 114 aa0.57□□□□□ -2.32
CD44-215ENST00000525241 A0A1W2PRE2 83 aa0.57□□□□□ -2.32
CD44-215ENST00000525241 TCRBV4S1A1TA0A5B7 111 aa0.57□□□□□ -2.32
CD44-215ENST00000525241 ODAMA1E959 279 aa0.57□□□□□ -2.32
CD44-215ENST00000525241 CST8O60676 142 aa0.57□□□□□ -2.32
CD44-215ENST00000525241 IDO1P14902 403 aa0.57□□□□□ -2.32
CD44-215ENST00000525241 TCTAP57738 103 aa0.57□□□□□ -2.32
CD44-215ENST00000525241 VBP1P61758 197 aa0.57□□□□□ -2.32
CD44-215ENST00000525241 MSMO1Q15800 293 aa0.57□□□□□ -2.32
CD44-215ENST00000525241 SNCBQ16143 134 aa0.57□□□□□ -2.32
CD44-215ENST00000525241 C3orf33Q6P1S2 294 aa0.57□□□□□ -2.32
CD44-215ENST00000525241 ZHX1-C8orf76Q96EF9 292 aa0.57□□□□□ -2.32
CD44-215ENST00000525241 LINC00052Q96N35 136 aa0.57□□□□□ -2.32
CD44-215ENST00000525241 GPER1Q99527 375 aa0.57□□□□□ -2.32
CD44-215ENST00000525241 PCBD2Q9H0N5 130 aa0.57□□□□□ -2.32
CD44-215ENST00000525241 CENPHQ9H3R5 247 aa0.57□□□□□ -2.32
CD44-215ENST00000525241 LRTM1Q9HBL6 345 aa0.57□□□□□ -2.32
CD44-215ENST00000525241 TRDV1A0A1B0GX56 115 aa0.56□□□□□ -2.32
CD44-215ENST00000525241 MAP1LC3B2A6NCE7 125 aa0.56□□□□□ -2.32
CD44-215ENST00000525241 TRIQKQ629K1 86 aa0.56□□□□□ -2.32
CD44-215ENST00000525241 CLECL1Q8IZS7 167 aa0.56□□□□□ -2.32
CD44-215ENST00000525241 STX19Q8N4C7 294 aa0.56□□□□□ -2.32
CD44-215ENST00000525241 OR5D16Q8NGK9 328 aa0.56□□□□□ -2.32
CD44-215ENST00000525241 CCL4L1Q8NHW4 92 aa0.56□□□□□ -2.32
CD44-215ENST00000525241 PBDC1Q9BVG4 233 aa0.56□□□□□ -2.32
CD44-215ENST00000525241 DDA1Q9BW61 102 aa0.56□□□□□ -2.32
CD44-215ENST00000525241 OR2H1Q9GZK4 316 aa0.56□□□□□ -2.32
CD44-215ENST00000525241 MAP1LC3BQ9GZQ8 125 aa0.56□□□□□ -2.32
CD44-215ENST00000525241 RASL12Q9NYN1 266 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 208.2 ms