RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 HDHD3Q9BSH5 251 aaPredicted RBP4.06□□□□□ -1.76
NEDD8-203ENST00000524927 KRTAP4-1Q9BYQ7 146 aa4.06□□□□□ -1.76
NEDD8-203ENST00000524927 SLC25A31Q9H0C2 315 aa4.06□□□□□ -1.76
NEDD8-203ENST00000524927 C12orf4Q9NQ89 552 aa4.06□□□□□ -1.76
NEDD8-203ENST00000524927 FUT9Q9Y231 359 aa4.06□□□□□ -1.76
NEDD8-203ENST00000524927 RBMX2Q9Y388 322 aaKnown RBP4.06□□□□□ -1.76
NEDD8-203ENST00000524927 FABP7O15540 132 aa4.05□□□□□ -1.76
NEDD8-203ENST00000524927 SLC22A5O76082 557 aa4.05□□□□□ -1.76
NEDD8-203ENST00000524927 GIPP09681 153 aaPredicted RBP4.05□□□□□ -1.76
NEDD8-203ENST00000524927 CD3GP09693 182 aa4.05□□□□□ -1.76
NEDD8-203ENST00000524927 KRTAP1-4P0C5Y4 121 aa4.05□□□□□ -1.76
NEDD8-203ENST00000524927 CD37P11049 281 aa4.05□□□□□ -1.76
NEDD8-203ENST00000524927 TAS2R31P59538 309 aa4.05□□□□□ -1.76
NEDD8-203ENST00000524927 VSNL1P62760 191 aa4.05□□□□□ -1.76
NEDD8-203ENST00000524927 RPL19P84098 196 aaKnown RBP4.05□□□□□ -1.76
NEDD8-203ENST00000524927 ZNF546Q86UE3 836 aa4.05□□□□□ -1.76
NEDD8-203ENST00000524927 SPACA4Q8TDM5 124 aa4.05□□□□□ -1.76
NEDD8-203ENST00000524927 GPR146Q96CH1 333 aa4.05□□□□□ -1.76
NEDD8-203ENST00000524927 SLC35E1Q96K37 410 aa4.05□□□□□ -1.76
NEDD8-203ENST00000524927 TMEM56Q96MV1 263 aa4.05□□□□□ -1.76
NEDD8-203ENST00000524927 C20orf144Q9BQM9 153 aa4.05□□□□□ -1.76
NEDD8-203ENST00000524927 PRRG3Q9BZD7 231 aa4.05□□□□□ -1.76
NEDD8-203ENST00000524927 SLC25A39Q9BZJ4 359 aaPredicted RBP4.05□□□□□ -1.76
NEDD8-203ENST00000524927 PLEKHJ1Q9NW61 149 aa4.05□□□□□ -1.76
NEDD8-203ENST00000524927 AK3Q9UIJ7 227 aa4.05□□□□□ -1.76
NEDD8-203ENST00000524927 IGLV1-50A0A075B6I6 118 aa4.04□□□□□ -1.76
NEDD8-203ENST00000524927 NQO2P16083 231 aa4.04□□□□□ -1.76
NEDD8-203ENST00000524927 OR2F1Q13607 317 aa4.04□□□□□ -1.76
NEDD8-203ENST00000524927 OR10J3Q5JRS4 329 aa4.04□□□□□ -1.76
NEDD8-203ENST00000524927 JAGN1Q8N5M9 183 aa4.04□□□□□ -1.76
NEDD8-203ENST00000524927 C20orf203Q8NBC4 194 aa4.04□□□□□ -1.76
NEDD8-203ENST00000524927 TRGV1A0A0A0MS02 117 aa4.03□□□□□ -1.76
NEDD8-203ENST00000524927 NUP62P37198 522 aaPredicted RBP4.03□□□□□ -1.76
NEDD8-203ENST00000524927 CCR6P51684 374 aa4.03□□□□□ -1.76
NEDD8-203ENST00000524927 EIF4EBP1Q13541 118 aaPredicted RBP4.03□□□□□ -1.76
NEDD8-203ENST00000524927 PSG3Q16557 428 aa4.03□□□□□ -1.76
NEDD8-203ENST00000524927 ASB16-AS1Q495Z4 193 aa4.03□□□□□ -1.76
NEDD8-203ENST00000524927 H1FOOQ8IZA3 346 aaPredicted RBP4.03□□□□□ -1.76
NEDD8-203ENST00000524927 CMTM5Q96DZ9 223 aa4.03□□□□□ -1.76
NEDD8-203ENST00000524927 GINS4Q9BRT9 223 aa4.03□□□□□ -1.76
NEDD8-203ENST00000524927 IGKV2D-24A0A075B6R9 120 aa4.02□□□□□ -1.77
NEDD8-203ENST00000524927 TRAV1-1A0A0B4J248 108 aa4.02□□□□□ -1.77
NEDD8-203ENST00000524927 A8MU10 97 aa4.02□□□□□ -1.77
NEDD8-203ENST00000524927 GGTLC3B5MD39 225 aa4.02□□□□□ -1.77
NEDD8-203ENST00000524927 RBFOX2O43251 390 aaKnown RBP eCLIP4.02□□□□□ -1.77
NEDD8-203ENST00000524927 IGKV1-17P01599 117 aa4.02□□□□□ -1.77
NEDD8-203ENST00000524927 IGHV3-53P01767 116 aa4.02□□□□□ -1.77
NEDD8-203ENST00000524927 OR5AC1P0C628 307 aa4.02□□□□□ -1.77
NEDD8-203ENST00000524927 WNT4P56705 351 aa4.02□□□□□ -1.77
NEDD8-203ENST00000524927 ST3GAL4Q11206 333 aa4.02□□□□□ -1.77
NEDD8-203ENST00000524927 TMED1Q13445 227 aa4.02□□□□□ -1.77
NEDD8-203ENST00000524927 TMEM183BQ1AE95 376 aa4.02□□□□□ -1.77
NEDD8-203ENST00000524927 KRTAP19-2Q3LHN2 52 aa4.02□□□□□ -1.77
NEDD8-203ENST00000524927 OR2T5Q6IEZ7 315 aa4.02□□□□□ -1.77
NEDD8-203ENST00000524927 RNASEKQ6P5S7 137 aaKnown RBP4.02□□□□□ -1.77
NEDD8-203ENST00000524927 IQCF2Q8IXL9 164 aa4.02□□□□□ -1.77
NEDD8-203ENST00000524927 TMEM183AQ8IXX5 376 aa4.02□□□□□ -1.77
NEDD8-203ENST00000524927 OR2T29Q8NH02 315 aa4.02□□□□□ -1.77
NEDD8-203ENST00000524927 Q8WTZ3 238 aa4.02□□□□□ -1.77
NEDD8-203ENST00000524927 LINC00846Q9NV44 126 aa4.02□□□□□ -1.77
NEDD8-203ENST00000524927 IGKV1OR2-108A0A075B7D4 117 aa4.01□□□□□ -1.77
NEDD8-203ENST00000524927 TRAV30A0A087WSZ9 112 aa4.01□□□□□ -1.77
NEDD8-203ENST00000524927 KRTAP4-16G5E9R7 235 aaPredicted RBP4.01□□□□□ -1.77
NEDD8-203ENST00000524927 J3QLW9 94 aa4.01□□□□□ -1.77
NEDD8-203ENST00000524927 WBP4O75554 376 aaKnown RBP4.01□□□□□ -1.77
NEDD8-203ENST00000524927 HPRT1P00492 218 aa4.01□□□□□ -1.77
NEDD8-203ENST00000524927 CDK1P06493 297 aa4.01□□□□□ -1.77
NEDD8-203ENST00000524927 HES5Q5TA89 166 aa4.01□□□□□ -1.77
NEDD8-203ENST00000524927 OR5H2Q8NGV7 314 aa4.01□□□□□ -1.77
NEDD8-203ENST00000524927 OR4X1Q8NH49 305 aa4.01□□□□□ -1.77
NEDD8-203ENST00000524927 TMEM59Q9BXS4 323 aa4.01□□□□□ -1.77
NEDD8-203ENST00000524927 NKIRAS1Q9NYS0 192 aa4.01□□□□□ -1.77
NEDD8-203ENST00000524927 OR51B2Q9Y5P1 312 aa4.01□□□□□ -1.77
NEDD8-203ENST00000524927 TRGV4A0A0C4DH28 118 aa4□□□□□ -1.77
NEDD8-203ENST00000524927 DAPL1A0PJW8 107 aa4□□□□□ -1.77
NEDD8-203ENST00000524927 M0R2T5 61 aa4□□□□□ -1.77
NEDD8-203ENST00000524927 SPINK4O60575 86 aa4□□□□□ -1.77
NEDD8-203ENST00000524927 UBBP0CG47 229 aa4□□□□□ -1.77
NEDD8-203ENST00000524927 BTCP35070 178 aa4□□□□□ -1.77
NEDD8-203ENST00000524927 PLP1P60201 277 aa4□□□□□ -1.77
NEDD8-203ENST00000524927 LGALS14Q8TCE9 139 aa4□□□□□ -1.77
NEDD8-203ENST00000524927 IL22RA2Q969J5 263 aa4□□□□□ -1.77
NEDD8-203ENST00000524927 C2orf50Q96LR7 162 aa4□□□□□ -1.77
NEDD8-203ENST00000524927 CMSS1Q9BQ75 279 aaKnown RBP4□□□□□ -1.77
NEDD8-203ENST00000524927 FKBP11Q9NYL4 201 aa4□□□□□ -1.77
NEDD8-203ENST00000524927 TAS2R8Q9NYW2 309 aa4□□□□□ -1.77
NEDD8-203ENST00000524927 CKLFQ9UBR5 152 aa4□□□□□ -1.77
NEDD8-203ENST00000524927 MUC12Q9UKN1 5478 aa4□□□□□ -1.77
NEDD8-203ENST00000524927 M0R129 80 aa3.99□□□□□ -1.77
NEDD8-203ENST00000524927 HLA-DQB1P01920 261 aa3.99□□□□□ -1.77
NEDD8-203ENST00000524927 YPEL3P61236 119 aaPredicted RBP3.99□□□□□ -1.77
NEDD8-203ENST00000524927 RHOBP62745 196 aa3.99□□□□□ -1.77
NEDD8-203ENST00000524927 C1orf194Q5T5A4 169 aa3.99□□□□□ -1.77
NEDD8-203ENST00000524927 CNIH2Q6PI25 160 aa3.99□□□□□ -1.77
NEDD8-203ENST00000524927 DAZ4Q86SG3 579 aaKnown RBP3.99□□□□□ -1.77
NEDD8-203ENST00000524927 INO80EQ8NBZ0 244 aaPredicted RBP3.99□□□□□ -1.77
NEDD8-203ENST00000524927 ZNF680Q8NEM1 530 aa3.99□□□□□ -1.77
NEDD8-203ENST00000524927 MRPL48Q96GC5 212 aaKnown RBP3.99□□□□□ -1.77
NEDD8-203ENST00000524927 DERL3Q96Q80 235 aa3.99□□□□□ -1.77
NEDD8-203ENST00000524927 DAZ3Q9NR90 486 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms