RNA–Protein interactions for RNA: ENST00000524556.1

CSTF3-204, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-204ENST00000524556 OR4E1P0C645 316 aa9.92□□□□□ -0.82
CSTF3-204ENST00000524556 RNASE4P34096 147 aaKnown RBP9.92□□□□□ -0.82
CSTF3-204ENST00000524556 TAS2R30P59541 319 aa9.92□□□□□ -0.82
CSTF3-204ENST00000524556 WFDC10BQ8IUB3 73 aa9.92□□□□□ -0.82
CSTF3-204ENST00000524556 RAB2BQ8WUD1 216 aa9.92□□□□□ -0.82
CSTF3-204ENST00000524556 DEDD2Q8WXF8 326 aa9.92□□□□□ -0.82
CSTF3-204ENST00000524556 LINC00477Q96M19 166 aa9.92□□□□□ -0.82
CSTF3-204ENST00000524556 VGLL1Q99990 258 aa9.92□□□□□ -0.82
CSTF3-204ENST00000524556 SLIRPQ9GZT3 109 aaKnown RBP9.92□□□□□ -0.82
CSTF3-204ENST00000524556 MRPL16Q9NX20 251 aaKnown RBP9.92□□□□□ -0.82
CSTF3-204ENST00000524556 TP53TG3Q9ULZ0 132 aa9.92□□□□□ -0.82
CSTF3-204ENST00000524556 IGLV5-52A0A0A0MRZ9 124 aa9.91□□□□□ -0.82
CSTF3-204ENST00000524556 M0R3E3 92 aa9.91□□□□□ -0.82
CSTF3-204ENST00000524556 PYDC2Q56P42 97 aa9.91□□□□□ -0.82
CSTF3-204ENST00000524556 MRPL32Q9BYC8 188 aaKnown RBP9.91□□□□□ -0.82
CSTF3-204ENST00000524556 MRPS26Q9BYN8 205 aaKnown RBP9.91□□□□□ -0.82
CSTF3-204ENST00000524556 AGPAT4-IT1Q9H0P7 198 aa9.91□□□□□ -0.82
CSTF3-204ENST00000524556 K7EQD1 137 aa9.9□□□□□ -0.82
CSTF3-204ENST00000524556 GPX1P07203 203 aa9.9□□□□□ -0.82
CSTF3-204ENST00000524556 CRISP2P16562 243 aa9.9□□□□□ -0.82
CSTF3-204ENST00000524556 Q6ZRG5 221 aa9.9□□□□□ -0.82
CSTF3-204ENST00000524556 NTN5Q8WTR8 489 aaPredicted RBP9.9□□□□□ -0.82
CSTF3-204ENST00000524556 BCL7BQ9BQE9 202 aa9.9□□□□□ -0.82
CSTF3-204ENST00000524556 TRBV19A0A075B6N1 114 aa9.89□□□□□ -0.83
CSTF3-204ENST00000524556 IGHV1OR15-1A0A075B7D0 117 aa9.89□□□□□ -0.83
CSTF3-204ENST00000524556 LRCOL1A6NCL2 159 aa9.89□□□□□ -0.83
CSTF3-204ENST00000524556 E5RGE8 158 aa9.89□□□□□ -0.83
CSTF3-204ENST00000524556 RGS13O14921 159 aa9.89□□□□□ -0.83
CSTF3-204ENST00000524556 SCGB1D2O95969 90 aa9.89□□□□□ -0.83
CSTF3-204ENST00000524556 CRYGDP07320 174 aa9.89□□□□□ -0.83
CSTF3-204ENST00000524556 NMBP08949 121 aa9.89□□□□□ -0.83
CSTF3-204ENST00000524556 SRIP30626 198 aa9.89□□□□□ -0.83
CSTF3-204ENST00000524556 CAMLGP49069 296 aa9.89□□□□□ -0.83
CSTF3-204ENST00000524556 TMBIM6P55061 237 aa9.89□□□□□ -0.83
CSTF3-204ENST00000524556 C10orf126Q8N4M7 172 aa9.89□□□□□ -0.83
CSTF3-204ENST00000524556 OR1L4Q8NGR5 311 aa9.89□□□□□ -0.83
CSTF3-204ENST00000524556 PRELID1Q9Y255 219 aa9.89□□□□□ -0.83
CSTF3-204ENST00000524556 RCL1Q9Y2P8 373 aaKnown RBP9.89□□□□□ -0.83
CSTF3-204ENST00000524556 TRGV4A0A0C4DH28 118 aa9.88□□□□□ -0.83
CSTF3-204ENST00000524556 KRTAP29-1A8MX34 341 aaPredicted RBP9.88□□□□□ -0.83
CSTF3-204ENST00000524556 RAB31Q13636 194 aa9.88□□□□□ -0.83
CSTF3-204ENST00000524556 IAH1Q2TAA2 248 aaPredicted RBP9.88□□□□□ -0.83
CSTF3-204ENST00000524556 PRR9Q5T870 116 aa9.88□□□□□ -0.83
CSTF3-204ENST00000524556 MIC13Q5XKP0 118 aa9.88□□□□□ -0.83
CSTF3-204ENST00000524556 Q6ZQT7 251 aa9.88□□□□□ -0.83
CSTF3-204ENST00000524556 C9orf47Q6ZRZ4 202 aa9.88□□□□□ -0.83
CSTF3-204ENST00000524556 NRARPQ7Z6K4 114 aa9.88□□□□□ -0.83
CSTF3-204ENST00000524556 IQCF2Q8IXL9 164 aa9.88□□□□□ -0.83
CSTF3-204ENST00000524556 ARPC5LQ9BPX5 153 aa9.88□□□□□ -0.83
CSTF3-204ENST00000524556 FAM30AQ9NZY2 134 aa9.88□□□□□ -0.83
CSTF3-204ENST00000524556 LRP1Q07954 4544 aaKnown RBP9.88□□□□□ -0.83
CSTF3-204ENST00000524556 C7orf66A4D0T2 115 aa9.87□□□□□ -0.83
CSTF3-204ENST00000524556 NDUFB4O95168 129 aa9.87□□□□□ -0.83
CSTF3-204ENST00000524556 GYPEP15421 78 aa9.87□□□□□ -0.83
CSTF3-204ENST00000524556 C12orf45Q8N5I9 185 aaPredicted RBP9.87□□□□□ -0.83
CSTF3-204ENST00000524556 ZFAND2AQ8N6M9 145 aa9.87□□□□□ -0.83
CSTF3-204ENST00000524556 PCNPQ8WW12 178 aaKnown RBP9.87□□□□□ -0.83
CSTF3-204ENST00000524556 PFDN5Q99471 154 aa9.87□□□□□ -0.83
CSTF3-204ENST00000524556 GSKIPQ9P0R6 139 aa9.87□□□□□ -0.83
CSTF3-204ENST00000524556 V9GYH0 126 aa9.87□□□□□ -0.83
CSTF3-204ENST00000524556 PSCAO43653 123 aa9.86□□□□□ -0.83
CSTF3-204ENST00000524556 HIST1H1EP10412 219 aaKnown RBP9.86□□□□□ -0.83
CSTF3-204ENST00000524556 ZNF415Q09FC8 603 aa9.86□□□□□ -0.83
CSTF3-204ENST00000524556 TMEM14CQ9P0S9 112 aa9.86□□□□□ -0.83
CSTF3-204ENST00000524556 FLVCR2Q9UPI3 526 aa9.86□□□□□ -0.83
CSTF3-204ENST00000524556 TIMM9Q9Y5J7 89 aa9.86□□□□□ -0.83
CSTF3-204ENST00000524556 FAT3Q8TDW7 4589 aa9.85□□□□□ -0.83
CSTF3-204ENST00000524556 NDUFB6O95139 128 aa9.85□□□□□ -0.83
CSTF3-204ENST00000524556 MBPP02686 304 aaPredicted RBP9.85□□□□□ -0.83
CSTF3-204ENST00000524556 C1QBP02746 253 aa9.85□□□□□ -0.83
CSTF3-204ENST00000524556 ORM1P02763 201 aa9.85□□□□□ -0.83
CSTF3-204ENST00000524556 PLA2G1BP04054 148 aaKnown RBP9.85□□□□□ -0.83
CSTF3-204ENST00000524556 SFTA3P0C7M3 94 aa9.85□□□□□ -0.83
CSTF3-204ENST00000524556 PDE6HQ13956 83 aa9.85□□□□□ -0.83
CSTF3-204ENST00000524556 TMEM78Q5T7P6 136 aa9.85□□□□□ -0.83
CSTF3-204ENST00000524556 EXOC3-AS1Q8N2X6 119 aa9.85□□□□□ -0.83
CSTF3-204ENST00000524556 Q8N814 137 aa9.85□□□□□ -0.83
CSTF3-204ENST00000524556 OR10G4Q8NGN3 311 aa9.85□□□□□ -0.83
CSTF3-204ENST00000524556 ZNF479Q96JC4 524 aa9.85□□□□□ -0.83
CSTF3-204ENST00000524556 TXNDC17Q9BRA2 123 aa9.85□□□□□ -0.83
CSTF3-204ENST00000524556 IGKV2-40A0A087WW87 121 aaPredicted RBP9.84□□□□□ -0.83
CSTF3-204ENST00000524556 H3BMQ9 156 aa9.84□□□□□ -0.83
CSTF3-204ENST00000524556 IGKV2D-40P01614 121 aaPredicted RBP9.84□□□□□ -0.83
CSTF3-204ENST00000524556 RPL29P47914 159 aaKnown RBP9.84□□□□□ -0.83
CSTF3-204ENST00000524556 BLNKQ8WV28 456 aa9.84□□□□□ -0.83
CSTF3-204ENST00000524556 SRRQ9GZT4 340 aa9.84□□□□□ -0.83
CSTF3-204ENST00000524556 SLC39A9Q9NUM3 307 aa9.84□□□□□ -0.83
CSTF3-204ENST00000524556 ZNF492Q9P255 531 aa9.84□□□□□ -0.83
CSTF3-204ENST00000524556 WDR83OSQ9Y284 106 aa9.84□□□□□ -0.83
CSTF3-204ENST00000524556 L7N2F9 121 aa9.83□□□□□ -0.84
CSTF3-204ENST00000524556 PYYP10082 97 aa9.83□□□□□ -0.84
CSTF3-204ENST00000524556 VAMP2P63027 116 aa9.83□□□□□ -0.84
CSTF3-204ENST00000524556 SERTAD4-AS1Q5TG53 156 aa9.83□□□□□ -0.84
CSTF3-204ENST00000524556 DEFB104AQ8WTQ1 72 aa9.83□□□□□ -0.84
CSTF3-204ENST00000524556 RASL10AQ92737 203 aa9.83□□□□□ -0.84
CSTF3-204ENST00000524556 C20orf85Q9H1P6 137 aa9.83□□□□□ -0.84
CSTF3-204ENST00000524556 AAMDCQ9H7C9 122 aa9.83□□□□□ -0.84
CSTF3-204ENST00000524556 UQCC1Q9NVA1 299 aa9.83□□□□□ -0.84
CSTF3-204ENST00000524556 IGHV3-38A0A0C4DH36 116 aa9.82□□□□□ -0.84
CSTF3-204ENST00000524556 IBA57-AS1B1ANH7 110 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms