RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 FXYD7P58549 80 aa9.1□□□□□ -0.95
VEGFA-225ENST00000523950 CASC10Q5T4H9 136 aa9.1□□□□□ -0.95
VEGFA-225ENST00000523950 ZNF503Q96F45 646 aa9.1□□□□□ -0.95
VEGFA-225ENST00000523950 RFNGQ9Y644 331 aa9.1□□□□□ -0.95
VEGFA-225ENST00000523950 NBEAL2Q6ZNJ1 2754 aa9.09□□□□□ -0.95
VEGFA-225ENST00000523950 IGHV4-28A0A0C4DH34 117 aa9.09□□□□□ -0.95
VEGFA-225ENST00000523950 NPIPB6E9PJ23 425 aa9.09□□□□□ -0.95
VEGFA-225ENST00000523950 STAG3L2P0CL84 134 aa9.09□□□□□ -0.95
VEGFA-225ENST00000523950 STAG3L3P0CL85 134 aa9.09□□□□□ -0.95
VEGFA-225ENST00000523950 CDKN1BP46527 198 aa9.09□□□□□ -0.95
VEGFA-225ENST00000523950 SPINK13Q1W4C9 94 aa9.09□□□□□ -0.95
VEGFA-225ENST00000523950 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.09□□□□□ -0.95
VEGFA-225ENST00000523950 C20orf144Q9BQM9 153 aa9.09□□□□□ -0.95
VEGFA-225ENST00000523950 SH3BGRL3Q9H299 93 aa9.09□□□□□ -0.95
VEGFA-225ENST00000523950 TMEM189A5PLL7 270 aa9.08□□□□□ -0.96
VEGFA-225ENST00000523950 PRAC2D3DTV9 90 aa9.08□□□□□ -0.96
VEGFA-225ENST00000523950 M0R3E3 92 aa9.08□□□□□ -0.96
VEGFA-225ENST00000523950 CRXO43186 299 aaPredicted RBP9.08□□□□□ -0.96
VEGFA-225ENST00000523950 CSN1S1P47710 185 aa9.08□□□□□ -0.96
VEGFA-225ENST00000523950 ICAM4Q14773 271 aa9.08□□□□□ -0.96
VEGFA-225ENST00000523950 TMEM256Q8N2U0 113 aa9.08□□□□□ -0.96
VEGFA-225ENST00000523950 EXOC3-AS1Q8N2X6 119 aa9.08□□□□□ -0.96
VEGFA-225ENST00000523950 RPP25LQ8N5L8 163 aaKnown RBP9.08□□□□□ -0.96
VEGFA-225ENST00000523950 ARL6IP6Q8N6S5 226 aa9.08□□□□□ -0.96
VEGFA-225ENST00000523950 LINC00477Q96M19 166 aa9.08□□□□□ -0.96
VEGFA-225ENST00000523950 ACTR3CQ9C0K3 210 aaPredicted RBP9.08□□□□□ -0.96
VEGFA-225ENST00000523950 M0R2Z0 102 aa9.07□□□□□ -0.96
VEGFA-225ENST00000523950 HBE1P02100 147 aa9.07□□□□□ -0.96
VEGFA-225ENST00000523950 RBMY1A1P0DJD3 496 aaKnown RBP9.07□□□□□ -0.96
VEGFA-225ENST00000523950 RBMY1CP0DJD4 496 aa9.07□□□□□ -0.96
VEGFA-225ENST00000523950 LEPP41159 167 aa9.07□□□□□ -0.96
VEGFA-225ENST00000523950 RBMY1FQ15415 496 aaKnown RBP9.07□□□□□ -0.96
VEGFA-225ENST00000523950 C1orf158Q8N1D5 194 aa9.07□□□□□ -0.96
VEGFA-225ENST00000523950 C11orf45Q8TAV5 145 aa9.07□□□□□ -0.96
VEGFA-225ENST00000523950 RXFP4Q8TDU9 374 aa9.07□□□□□ -0.96
VEGFA-225ENST00000523950 RAB24Q969Q5 203 aa9.07□□□□□ -0.96
VEGFA-225ENST00000523950 TMEM208Q9BTX3 173 aa9.07□□□□□ -0.96
VEGFA-225ENST00000523950 Q9H3A6 140 aa9.07□□□□□ -0.96
VEGFA-225ENST00000523950 SMCO4Q9NRQ5 59 aa9.07□□□□□ -0.96
VEGFA-225ENST00000523950 TEX48A0A1B0GUV7 120 aa9.06□□□□□ -0.96
VEGFA-225ENST00000523950 RBAKDNA6NC62 111 aa9.06□□□□□ -0.96
VEGFA-225ENST00000523950 NUPR2A6NF83 97 aa9.06□□□□□ -0.96
VEGFA-225ENST00000523950 NDUFS6O75380 124 aaKnown RBP9.06□□□□□ -0.96
VEGFA-225ENST00000523950 CXorf1O96002 111 aa9.06□□□□□ -0.96
VEGFA-225ENST00000523950 SLC25A5P05141 298 aaKnown RBP9.06□□□□□ -0.96
VEGFA-225ENST00000523950 SFTA3P0C7M3 94 aa9.06□□□□□ -0.96
VEGFA-225ENST00000523950 ARL14EPLP0DKL9 152 aa9.06□□□□□ -0.96
VEGFA-225ENST00000523950 ADCYAP1P18509 176 aa9.06□□□□□ -0.96
VEGFA-225ENST00000523950 RANP62826 216 aaKnown RBP9.06□□□□□ -0.96
VEGFA-225ENST00000523950 RRN3P1Q2M238 152 aa9.06□□□□□ -0.96
VEGFA-225ENST00000523950 AKR1C8PQ5T2L2 129 aa9.06□□□□□ -0.96
VEGFA-225ENST00000523950 ZFAND6Q6FIF0 208 aa9.06□□□□□ -0.96
VEGFA-225ENST00000523950 C9orf47Q6ZRZ4 202 aa9.06□□□□□ -0.96
VEGFA-225ENST00000523950 OTORQ9NRC9 128 aa9.06□□□□□ -0.96
VEGFA-225ENST00000523950 TMEM167BQ9NRX6 74 aa9.06□□□□□ -0.96
VEGFA-225ENST00000523950 IGHV3OR16-12A0A075B7B8 117 aa9.05□□□□□ -0.96
VEGFA-225ENST00000523950 TRBV7-9A0A0J9YWB2 115 aa9.05□□□□□ -0.96
VEGFA-225ENST00000523950 CTXND1A0A1B0GTU2 59 aa9.05□□□□□ -0.96
VEGFA-225ENST00000523950 CXorf65A6NEN9 183 aa9.05□□□□□ -0.96
VEGFA-225ENST00000523950 RHEBQ15382 184 aa9.05□□□□□ -0.96
VEGFA-225ENST00000523950 TMEM78Q5T7P6 136 aa9.05□□□□□ -0.96
VEGFA-225ENST00000523950 ATRAIDQ6UW56 229 aa9.05□□□□□ -0.96
VEGFA-225ENST00000523950 C15orf54Q8N8G6 183 aa9.05□□□□□ -0.96
VEGFA-225ENST00000523950 CMTM2Q8TAZ6 248 aa9.05□□□□□ -0.96
VEGFA-225ENST00000523950 TRAV12-2A0A075B6T6 113 aa9.04□□□□□ -0.96
VEGFA-225ENST00000523950 TRAV1-1A0A0B4J248 108 aa9.04□□□□□ -0.96
VEGFA-225ENST00000523950 DEFB4AO15263 64 aa9.04□□□□□ -0.96
VEGFA-225ENST00000523950 HMGB3O15347 200 aaKnown RBP9.04□□□□□ -0.96
VEGFA-225ENST00000523950 CT45A10P0DMU9 189 aa9.04□□□□□ -0.96
VEGFA-225ENST00000523950 GCHFRP30047 84 aa9.04□□□□□ -0.96
VEGFA-225ENST00000523950 RNF212Q495C1 297 aa9.04□□□□□ -0.96
VEGFA-225ENST00000523950 FAM19A4Q96LR4 140 aa9.04□□□□□ -0.96
VEGFA-225ENST00000523950 AGPAT4-IT1Q9H0P7 198 aa9.04□□□□□ -0.96
VEGFA-225ENST00000523950 IGKV2-40A0A087WW87 121 aaPredicted RBP9.03□□□□□ -0.96
VEGFA-225ENST00000523950 LOC102723971A0A1B0GUV8 181 aa9.03□□□□□ -0.96
VEGFA-225ENST00000523950 SERTM2A0A1B0GWG4 89 aa9.03□□□□□ -0.96
VEGFA-225ENST00000523950 PGPA6NDG6 321 aa9.03□□□□□ -0.96
VEGFA-225ENST00000523950 FAM74A7A6NL05 159 aa9.03□□□□□ -0.96
VEGFA-225ENST00000523950 C11orf94C9JXX5 98 aa9.03□□□□□ -0.96
VEGFA-225ENST00000523950 H7BYZ3 331 aa9.03□□□□□ -0.96
VEGFA-225ENST00000523950 EIF3GO75821 320 aaKnown RBP eCLIP9.03□□□□□ -0.96
VEGFA-225ENST00000523950 IGKV2D-40P01614 121 aaPredicted RBP9.03□□□□□ -0.96
VEGFA-225ENST00000523950 CRISP2P16562 243 aa9.03□□□□□ -0.96
VEGFA-225ENST00000523950 TAGLN2P37802 199 aaKnown RBP9.03□□□□□ -0.96
VEGFA-225ENST00000523950 TAS2R60P59551 318 aa9.03□□□□□ -0.96
VEGFA-225ENST00000523950 PMS2P11Q13670 270 aa9.03□□□□□ -0.96
VEGFA-225ENST00000523950 FAM74A3Q4VXF1 159 aa9.03□□□□□ -0.96
VEGFA-225ENST00000523950 SMUG1Q53HV7 270 aa9.03□□□□□ -0.96
VEGFA-225ENST00000523950 GFI1BQ5VTD9 330 aa9.03□□□□□ -0.96
VEGFA-225ENST00000523950 ZNF492Q9P255 531 aa9.03□□□□□ -0.96
VEGFA-225ENST00000523950 KLK5Q9Y337 293 aaPredicted RBP9.03□□□□□ -0.96
VEGFA-225ENST00000523950 LENEPQ9Y5L5 61 aa9.03□□□□□ -0.96
VEGFA-225ENST00000523950 KLLNB2CW77 178 aa9.02□□□□□ -0.97
VEGFA-225ENST00000523950 DIRC3C9JPN6 131 aa9.02□□□□□ -0.97
VEGFA-225ENST00000523950 SPART-AS1P0CW21 52 aa9.02□□□□□ -0.97
VEGFA-225ENST00000523950 PRB4P10163 310 aaPredicted RBP9.02□□□□□ -0.97
VEGFA-225ENST00000523950 ZNF138P52744 262 aa9.02□□□□□ -0.97
VEGFA-225ENST00000523950 NANOS2P60321 138 aaKnown RBP9.02□□□□□ -0.97
VEGFA-225ENST00000523950 ERCC8Q13216 396 aa9.02□□□□□ -0.97
VEGFA-225ENST00000523950 CEMP1Q6PRD7 247 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms