RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 LINC00612Q8N6U2 182 aa11.99□□□□□ -0.49
SQLE-205ENST00000521232 SCGB1C1Q8TD33 95 aa11.99□□□□□ -0.49
SQLE-205ENST00000521232 RNF141Q8WVD5 230 aa11.99□□□□□ -0.49
SQLE-205ENST00000521232 ALG5Q9Y673 324 aa11.99□□□□□ -0.49
SQLE-205ENST00000521232 NACAE9PAV3 2078 aa11.99□□□□□ -0.49
SQLE-205ENST00000521232 F5H768 121 aa11.98□□□□□ -0.49
SQLE-205ENST00000521232 ZNF324O75467 553 aaPredicted RBP11.98□□□□□ -0.49
SQLE-205ENST00000521232 OR10J4P0C629 311 aa11.98□□□□□ -0.49
SQLE-205ENST00000521232 CRISP2P16562 243 aa11.98□□□□□ -0.49
SQLE-205ENST00000521232 LGALS9BQ3B8N2 356 aa11.98□□□□□ -0.49
SQLE-205ENST00000521232 ZNF503Q96F45 646 aa11.98□□□□□ -0.49
SQLE-205ENST00000521232 SMIM3Q9BZL3 60 aa11.98□□□□□ -0.49
SQLE-205ENST00000521232 C7orf71A4D174 169 aa11.97□□□□□ -0.49
SQLE-205ENST00000521232 NMBP08949 121 aa11.97□□□□□ -0.49
SQLE-205ENST00000521232 FFAR4Q5NUL3 377 aa11.97□□□□□ -0.49
SQLE-205ENST00000521232 FAM122CQ6P4D5 195 aa11.97□□□□□ -0.49
SQLE-205ENST00000521232 LINC00467Q9BRT7 94 aa11.97□□□□□ -0.49
SQLE-205ENST00000521232 WFDC1Q9HC57 220 aa11.97□□□□□ -0.49
SQLE-205ENST00000521232 SNURFLB1AK76 121 aa11.96□□□□□ -0.49
SQLE-205ENST00000521232 M0R2N4 97 aa11.96□□□□□ -0.49
SQLE-205ENST00000521232 PTTG1O95997 202 aa11.96□□□□□ -0.49
SQLE-205ENST00000521232 CD300CQ08708 224 aa11.96□□□□□ -0.49
SQLE-205ENST00000521232 TMEM78Q5T7P6 136 aa11.96□□□□□ -0.49
SQLE-205ENST00000521232 LINC00336Q6ZUF6 198 aa11.96□□□□□ -0.49
SQLE-205ENST00000521232 LYPD1Q8N2G4 141 aa11.96□□□□□ -0.49
SQLE-205ENST00000521232 PHYHIPLQ96FC7 376 aa11.96□□□□□ -0.49
SQLE-205ENST00000521232 VGLL1Q99990 258 aa11.96□□□□□ -0.49
SQLE-205ENST00000521232 PKD1P98161 4303 aa11.95□□□□□ -0.5
SQLE-205ENST00000521232 IGKV2-40A0A087WW87 121 aaPredicted RBP11.95□□□□□ -0.5
SQLE-205ENST00000521232 OR7C2O60412 319 aa11.95□□□□□ -0.5
SQLE-205ENST00000521232 IGKV2D-40P01614 121 aaPredicted RBP11.95□□□□□ -0.5
SQLE-205ENST00000521232 FAM3BP58499 235 aaPredicted RBP11.95□□□□□ -0.5
SQLE-205ENST00000521232 DAZ2Q13117 558 aaKnown RBP11.95□□□□□ -0.5
SQLE-205ENST00000521232 BTN1A1Q13410 526 aa11.95□□□□□ -0.5
SQLE-205ENST00000521232 ZNF492Q9P255 531 aa11.95□□□□□ -0.5
SQLE-205ENST00000521232 PKHD1P08F94 4074 aa11.95□□□□□ -0.5
SQLE-205ENST00000521232 TRBV7-9A0A0J9YWB2 115 aa11.94□□□□□ -0.5
SQLE-205ENST00000521232 GPX1P07203 203 aa11.94□□□□□ -0.5
SQLE-205ENST00000521232 RNASE4P34096 147 aaKnown RBP11.94□□□□□ -0.5
SQLE-205ENST00000521232 TAS2R45P59539 299 aa11.94□□□□□ -0.5
SQLE-205ENST00000521232 RANP62826 216 aaKnown RBP11.94□□□□□ -0.5
SQLE-205ENST00000521232 ANXA2RQ3ZCQ2 193 aa11.94□□□□□ -0.5
SQLE-205ENST00000521232 KHDC3LQ587J8 217 aa11.94□□□□□ -0.5
SQLE-205ENST00000521232 Q6ZR54 194 aa11.94□□□□□ -0.5
SQLE-205ENST00000521232 ZFAND2AQ8N6M9 145 aa11.94□□□□□ -0.5
SQLE-205ENST00000521232 IGLV2-18A0A075B6J9 118 aa11.93□□□□□ -0.5
SQLE-205ENST00000521232 RBAKDNA6NC62 111 aa11.93□□□□□ -0.5
SQLE-205ENST00000521232 UBE2L3P68036 154 aaKnown RBP11.93□□□□□ -0.5
SQLE-205ENST00000521232 EIF4E3Q8N5X7 224 aaKnown RBP11.93□□□□□ -0.5
SQLE-205ENST00000521232 C11orf72Q8NBR9 251 aa11.93□□□□□ -0.5
SQLE-205ENST00000521232 ZNF680Q8NEM1 530 aa11.93□□□□□ -0.5
SQLE-205ENST00000521232 Q9H3A6 140 aa11.93□□□□□ -0.5
SQLE-205ENST00000521232 GAGE12BA1L429 117 aa11.92□□□□□ -0.5
SQLE-205ENST00000521232 RTL8CO15255 209 aa11.92□□□□□ -0.5
SQLE-205ENST00000521232 GAGE7O76087 117 aa11.92□□□□□ -0.5
SQLE-205ENST00000521232 NUDT3O95989 172 aa11.92□□□□□ -0.5
SQLE-205ENST00000521232 GAGE12FP0CL80 117 aa11.92□□□□□ -0.5
SQLE-205ENST00000521232 GAGE12GP0CL81 117 aa11.92□□□□□ -0.5
SQLE-205ENST00000521232 GAGE12IP0CL82 117 aa11.92□□□□□ -0.5
SQLE-205ENST00000521232 M6PRP20645 277 aa11.92□□□□□ -0.5
SQLE-205ENST00000521232 CSN1S1P47710 185 aa11.92□□□□□ -0.5
SQLE-205ENST00000521232 ZNF138P52744 262 aa11.92□□□□□ -0.5
SQLE-205ENST00000521232 ACOT6Q3I5F7 207 aaPredicted RBP11.92□□□□□ -0.5
SQLE-205ENST00000521232 ATG101Q9BSB4 218 aa11.92□□□□□ -0.5
SQLE-205ENST00000521232 MED28Q9H204 178 aa11.92□□□□□ -0.5
SQLE-205ENST00000521232 OR5I1Q13606 314 aa11.91□□□□□ -0.5
SQLE-205ENST00000521232 PRR9Q5T870 116 aa11.91□□□□□ -0.5
SQLE-205ENST00000521232 RXFP4Q8TDU9 374 aa11.91□□□□□ -0.5
SQLE-205ENST00000521232 C18orf15Q96N68 181 aa11.91□□□□□ -0.5
SQLE-205ENST00000521232 GSN-AS1Q9NRJ2 163 aa11.91□□□□□ -0.5
SQLE-205ENST00000521232 DYNC1H1Q14204 4646 aaKnown RBP11.91□□□□□ -0.5
SQLE-205ENST00000521232 HERC2O95714 4834 aa11.9□□□□□ -0.5
SQLE-205ENST00000521232 DIRC3C9JPN6 131 aa11.9□□□□□ -0.5
SQLE-205ENST00000521232 HOXA5P20719 270 aa11.9□□□□□ -0.5
SQLE-205ENST00000521232 PQLC2Q6ZP29 291 aa11.9□□□□□ -0.5
SQLE-205ENST00000521232 Q6ZTI0 123 aa11.9□□□□□ -0.5
SQLE-205ENST00000521232 AQP10Q96PS8 301 aa11.9□□□□□ -0.5
SQLE-205ENST00000521232 DNAH11Q96DT5 4516 aa11.9□□□□□ -0.51
SQLE-205ENST00000521232 IGHV1OR15-1A0A075B7D0 117 aa11.89□□□□□ -0.51
SQLE-205ENST00000521232 TRAV26-1A0A087WT03 109 aa11.89□□□□□ -0.51
SQLE-205ENST00000521232 A0A1B0GVY2 172 aa11.89□□□□□ -0.51
SQLE-205ENST00000521232 A0A1W2PPV4 95 aa11.89□□□□□ -0.51
SQLE-205ENST00000521232 EIF3GO75821 320 aaKnown RBP eCLIP11.89□□□□□ -0.513e-8■■■□□ 15.2
SQLE-205ENST00000521232 CCL18P55774 89 aa11.89□□□□□ -0.51
SQLE-205ENST00000521232 ZNF266Q14584 549 aa11.89□□□□□ -0.51
SQLE-205ENST00000521232 IBA57Q5T440 356 aaKnown RBP11.89□□□□□ -0.51
SQLE-205ENST00000521232 Q6ZQT7 251 aa11.89□□□□□ -0.51
SQLE-205ENST00000521232 Q8TAT8 98 aa11.89□□□□□ -0.51
SQLE-205ENST00000521232 GNPNAT1Q96EK6 184 aaPredicted RBP11.89□□□□□ -0.51
SQLE-205ENST00000521232 OTORQ9NRC9 128 aa11.89□□□□□ -0.51
SQLE-205ENST00000521232 LENEPQ9Y5L5 61 aa11.89□□□□□ -0.51
SQLE-205ENST00000521232 MUC4Q99102 2169 aa11.89□□□□□ -0.51
SQLE-205ENST00000521232 PRSS29PA6NIE9 313 aa11.88□□□□□ -0.51
SQLE-205ENST00000521232 H3BNG1 76 aa11.88□□□□□ -0.51
SQLE-205ENST00000521232 RGS13O14921 159 aa11.88□□□□□ -0.51
SQLE-205ENST00000521232 SPINK4O60575 86 aa11.88□□□□□ -0.51
SQLE-205ENST00000521232 TCL1AP56279 114 aa11.88□□□□□ -0.51
SQLE-205ENST00000521232 RAB2AP61019 212 aa11.88□□□□□ -0.51
SQLE-205ENST00000521232 Q5BKY6 102 aa11.88□□□□□ -0.51
SQLE-205ENST00000521232 ARL6IP6Q8N6S5 226 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 152.4 ms