RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 PSG3Q16557 428 aa6.44□□□□□ -1.38
VAPB-206ENST00000520497 IBA57Q5T440 356 aaKnown RBP6.44□□□□□ -1.38
VAPB-206ENST00000520497 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.44□□□□□ -1.38
VAPB-206ENST00000520497 FAM24BQ8N5W8 94 aa6.44□□□□□ -1.38
VAPB-206ENST00000520497 NRN1Q9NPD7 142 aa6.44□□□□□ -1.38
VAPB-206ENST00000520497 SIGLEC8Q9NYZ4 499 aa6.44□□□□□ -1.38
VAPB-206ENST00000520497 MLXQ9UH92 298 aa6.44□□□□□ -1.38
VAPB-206ENST00000520497 TRAV34A0A0B4J273 112 aa6.43□□□□□ -1.38
VAPB-206ENST00000520497 PGPEP1LA6NFU8 196 aa6.43□□□□□ -1.38
VAPB-206ENST00000520497 SOCS3O14543 225 aa6.43□□□□□ -1.38
VAPB-206ENST00000520497 OVOL1O14753 267 aa6.43□□□□□ -1.38
VAPB-206ENST00000520497 GATCO43716 136 aaKnown RBP6.43□□□□□ -1.38
VAPB-206ENST00000520497 LTAP01374 205 aa6.43□□□□□ -1.38
VAPB-206ENST00000520497 FOLR2P14207 255 aa6.43□□□□□ -1.38
VAPB-206ENST00000520497 RAB5AP20339 215 aa6.43□□□□□ -1.38
VAPB-206ENST00000520497 RAB5BP61020 215 aa6.43□□□□□ -1.38
VAPB-206ENST00000520497 PAFAH1B2P68402 229 aa6.43□□□□□ -1.38
VAPB-206ENST00000520497 FAM231DQ6ZW35 169 aa6.43□□□□□ -1.38
VAPB-206ENST00000520497 PRNTQ86SH4 94 aa6.43□□□□□ -1.38
VAPB-206ENST00000520497 TMEM183AQ8IXX5 376 aa6.43□□□□□ -1.38
VAPB-206ENST00000520497 GBGT1Q8N5D6 347 aa6.43□□□□□ -1.38
VAPB-206ENST00000520497 OR4B1Q8NGF8 309 aa6.43□□□□□ -1.38
VAPB-206ENST00000520497 FAM210BQ96KR6 192 aa6.43□□□□□ -1.38
VAPB-206ENST00000520497 IL36BQ9NZH7 164 aa6.43□□□□□ -1.38
VAPB-206ENST00000520497 ZNF492Q9P255 531 aa6.43□□□□□ -1.38
VAPB-206ENST00000520497 PSG8Q9UQ74 426 aa6.43□□□□□ -1.38
VAPB-206ENST00000520497 URGCP-MRPS24S4R325 110 aa6.43□□□□□ -1.38
VAPB-206ENST00000520497 TRBV24-1A0A075B6N3 115 aa6.42□□□□□ -1.38
VAPB-206ENST00000520497 TRAV8-2A0A0B4J237 113 aa6.42□□□□□ -1.38
VAPB-206ENST00000520497 XKRY2A2RUG3 117 aa6.42□□□□□ -1.38
VAPB-206ENST00000520497 COLCA2A8K830 154 aa6.42□□□□□ -1.38
VAPB-206ENST00000520497 ZNF705GA8MUZ8 300 aaPredicted RBP6.42□□□□□ -1.38
VAPB-206ENST00000520497 K7EN84 100 aa6.42□□□□□ -1.38
VAPB-206ENST00000520497 P01737 135 aa6.42□□□□□ -1.38
VAPB-206ENST00000520497 ELOBQ15370 118 aa6.42□□□□□ -1.38
VAPB-206ENST00000520497 COX19Q49B96 90 aa6.42□□□□□ -1.38
VAPB-206ENST00000520497 TMEM78Q5T7P6 136 aa6.42□□□□□ -1.38
VAPB-206ENST00000520497 LCN12Q6JVE5 192 aa6.42□□□□□ -1.38
VAPB-206ENST00000520497 PRR27Q6MZM9 219 aa6.42□□□□□ -1.38
VAPB-206ENST00000520497 C12orf54Q6X4T0 127 aa6.42□□□□□ -1.38
VAPB-206ENST00000520497 TCF24Q7RTU0 167 aa6.42□□□□□ -1.38
VAPB-206ENST00000520497 LINC00482Q8N8I6 264 aa6.42□□□□□ -1.38
VAPB-206ENST00000520497 ZNF738Q8NE65 137 aa6.42□□□□□ -1.38
VAPB-206ENST00000520497 DCANP1Q8TF63 244 aa6.42□□□□□ -1.38
VAPB-206ENST00000520497 ZNF747Q9BV97 191 aa6.42□□□□□ -1.38
VAPB-206ENST00000520497 AURKAIP1Q9NWT8 199 aaPredicted RBP6.42□□□□□ -1.38
VAPB-206ENST00000520497 A0A1W2PPQ1 181 aa6.41□□□□□ -1.38
VAPB-206ENST00000520497 M0R3E3 92 aa6.41□□□□□ -1.38
VAPB-206ENST00000520497 RPS10P46783 165 aaKnown RBP6.41□□□□□ -1.38
VAPB-206ENST00000520497 FAM3BP58499 235 aaPredicted RBP6.41□□□□□ -1.38
VAPB-206ENST00000520497 SNRPD3P62318 126 aaKnown RBP6.41□□□□□ -1.38
VAPB-206ENST00000520497 OR5I1Q13606 314 aa6.41□□□□□ -1.38
VAPB-206ENST00000520497 CT83Q5H943 113 aa6.41□□□□□ -1.38
VAPB-206ENST00000520497 NHLRC2Q8NBF2 726 aa6.41□□□□□ -1.38
VAPB-206ENST00000520497 OR10J6PQ8NGY7 276 aa6.41□□□□□ -1.38
VAPB-206ENST00000520497 DYNLRB2Q8TF09 96 aa6.41□□□□□ -1.38
VAPB-206ENST00000520497 LINC00479Q96M42 142 aa6.41□□□□□ -1.38
VAPB-206ENST00000520497 IGKV2-40A0A087WW87 121 aaPredicted RBP6.4□□□□□ -1.38
VAPB-206ENST00000520497 TGIF2-C20orf24A0A0A6YYL0 155 aa6.4□□□□□ -1.38
VAPB-206ENST00000520497 A8MWL6 223 aa6.4□□□□□ -1.38
VAPB-206ENST00000520497 IGKV2D-40P01614 121 aaPredicted RBP6.4□□□□□ -1.38
VAPB-206ENST00000520497 IGLV2-8P01709 118 aa6.4□□□□□ -1.38
VAPB-206ENST00000520497 PF4P02776 101 aa6.4□□□□□ -1.38
VAPB-206ENST00000520497 HLA-DMBP28068 263 aa6.4□□□□□ -1.38
VAPB-206ENST00000520497 RPS20P60866 119 aaKnown RBP6.4□□□□□ -1.38
VAPB-206ENST00000520497 DEFB114Q30KQ6 69 aa6.4□□□□□ -1.38
VAPB-206ENST00000520497 SMUG1Q53HV7 270 aa6.4□□□□□ -1.38
VAPB-206ENST00000520497 TMEM61Q8N0U2 210 aa6.4□□□□□ -1.38
VAPB-206ENST00000520497 LINC00528Q8N1L1 170 aa6.4□□□□□ -1.38
VAPB-206ENST00000520497 RNF182Q8N6D2 247 aa6.4□□□□□ -1.38
VAPB-206ENST00000520497 BORCS7Q96B45 105 aa6.4□□□□□ -1.38
VAPB-206ENST00000520497 YPEL4Q96NS1 127 aa6.4□□□□□ -1.38
VAPB-206ENST00000520497 RNASE7Q9H1E1 156 aaKnown RBP6.4□□□□□ -1.38
VAPB-206ENST00000520497 MS4A6AQ9H2W1 248 aa6.4□□□□□ -1.38
VAPB-206ENST00000520497 RPP21Q9H633 154 aaKnown RBP6.4□□□□□ -1.38
VAPB-206ENST00000520497 LENEPQ9Y5L5 61 aa6.4□□□□□ -1.38
VAPB-206ENST00000520497 SELENOKQ9Y6D0 94 aa6.4□□□□□ -1.38
VAPB-206ENST00000520497 V9GYV3 84 aa6.4□□□□□ -1.38
VAPB-206ENST00000520497 TRAV8-1A0A0A6YYK1 113 aa6.39□□□□□ -1.39
VAPB-206ENST00000520497 TRAV2A0A0B4J234 112 aa6.39□□□□□ -1.39
VAPB-206ENST00000520497 TRAV25A0A0B4J276 109 aa6.39□□□□□ -1.39
VAPB-206ENST00000520497 K7EQG2 157 aa6.39□□□□□ -1.39
VAPB-206ENST00000520497 TYMSP04818 313 aa6.39□□□□□ -1.39
VAPB-206ENST00000520497 S100A6P06703 90 aa6.39□□□□□ -1.39
VAPB-206ENST00000520497 PFN1P07737 140 aaKnown RBP6.39□□□□□ -1.39
VAPB-206ENST00000520497 ZNF138P52744 262 aa6.39□□□□□ -1.39
VAPB-206ENST00000520497 CD300EQ496F6 205 aaPredicted RBP6.39□□□□□ -1.39
VAPB-206ENST00000520497 FAM162BQ5T6X4 162 aa6.39□□□□□ -1.39
VAPB-206ENST00000520497 Q6AWC8 147 aa6.39□□□□□ -1.39
VAPB-206ENST00000520497 IGFL4Q6B9Z1 124 aa6.39□□□□□ -1.39
VAPB-206ENST00000520497 WDR73Q6P4I2 378 aa6.39□□□□□ -1.39
VAPB-206ENST00000520497 RBPMS2Q6ZRY4 209 aaKnown RBP6.39□□□□□ -1.39
VAPB-206ENST00000520497 NUDT10Q8NFP7 164 aa6.39□□□□□ -1.39
VAPB-206ENST00000520497 NUDT11Q96G61 164 aa6.39□□□□□ -1.39
VAPB-206ENST00000520497 C20orf173Q96LM9 149 aa6.39□□□□□ -1.39
VAPB-206ENST00000520497 SGK494Q96LW2 274 aa6.39□□□□□ -1.39
VAPB-206ENST00000520497 LINC00477Q96M19 166 aa6.39□□□□□ -1.39
VAPB-206ENST00000520497 PYGO2Q9BRQ0 406 aa6.39□□□□□ -1.39
VAPB-206ENST00000520497 MLST8Q9BVC4 326 aa6.39□□□□□ -1.39
VAPB-206ENST00000520497 GFRA4Q9GZZ7 299 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms