RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 Q6ZS46 218 aa19.76■□□□□ 0.75
COL13A1-213ENST00000520267 C2orf88Q9BSF0 95 aa19.76■□□□□ 0.75
COL13A1-213ENST00000520267 MUC21A0A0G2JKD1 596 aa19.76■□□□□ 0.75
COL13A1-213ENST00000520267 MUC21A0A140T8X8 626 aa19.76■□□□□ 0.75
COL13A1-213ENST00000520267 MUC21Q5SSG8 566 aa19.76■□□□□ 0.75
COL13A1-213ENST00000520267 ZNF493Q6ZR52 646 aa19.76■□□□□ 0.75
COL13A1-213ENST00000520267 RBAKDNA6NC62 111 aa19.75■□□□□ 0.75
COL13A1-213ENST00000520267 BTF3P20290 206 aaKnown RBP19.75■□□□□ 0.75
COL13A1-213ENST00000520267 C8orf86Q6ZUL3 223 aa19.75■□□□□ 0.75
COL13A1-213ENST00000520267 UTP20O75691 2785 aaKnown RBP19.75■□□□□ 0.75
COL13A1-213ENST00000520267 SNHG12Q9BXW3 62 aa19.74■□□□□ 0.75
COL13A1-213ENST00000520267 CSN3P07498 182 aa19.74■□□□□ 0.75
COL13A1-213ENST00000520267 SPATA45Q537H7 98 aa19.74■□□□□ 0.75
COL13A1-213ENST00000520267 LBHQ53QV2 105 aaPredicted RBP19.74■□□□□ 0.75
COL13A1-213ENST00000520267 ATOH7Q8N100 152 aa19.74■□□□□ 0.75
COL13A1-213ENST00000520267 RPS20P60866 119 aaKnown RBP19.73■□□□□ 0.75
COL13A1-213ENST00000520267 IL17RELQ6ZVW7 336 aa19.73■□□□□ 0.75
COL13A1-213ENST00000520267 UNQ9165/PRO28630Q6UXU0 137 aa19.73■□□□□ 0.75
COL13A1-213ENST00000520267 SPATA12Q7Z6I5 190 aa19.73■□□□□ 0.75
COL13A1-213ENST00000520267 CELSR2Q9HCU4 2923 aa19.73■□□□□ 0.75
COL13A1-213ENST00000520267 LINC00173Q6ZV60 143 aa19.72■□□□□ 0.75
COL13A1-213ENST00000520267 PSMG3-AS1Q96PY0 264 aa19.72■□□□□ 0.75
COL13A1-213ENST00000520267 AGPAT4-IT1Q9H0P7 198 aa19.72■□□□□ 0.75
COL13A1-213ENST00000520267 KLK15Q9H2R5 256 aa19.72■□□□□ 0.75
COL13A1-213ENST00000520267 CRYBG3Q68DQ2 2970 aa19.72■□□□□ 0.75
COL13A1-213ENST00000520267 FABP5P3A8MUU1 101 aa19.72■□□□□ 0.75
COL13A1-213ENST00000520267 FER1L6-AS1Q8NA97 138 aa19.72■□□□□ 0.75
COL13A1-213ENST00000520267 BBC3Q96PG8 261 aaPredicted RBP19.72■□□□□ 0.75
COL13A1-213ENST00000520267 ORM1P02763 201 aa19.71■□□□□ 0.75
COL13A1-213ENST00000520267 IGLC6P0CF74 106 aa19.71■□□□□ 0.75
COL13A1-213ENST00000520267 DSCR9P59020 149 aa19.71■□□□□ 0.75
COL13A1-213ENST00000520267 GLMPQ8WWB7 406 aa19.71■□□□□ 0.75
COL13A1-213ENST00000520267 IGHV3-11P01762 117 aa19.71■□□□□ 0.75
COL13A1-213ENST00000520267 SRSF2Q01130 221 aaKnown RBP19.71■□□□□ 0.75
COL13A1-213ENST00000520267 M0QZK8 103 aa19.7■□□□□ 0.74
COL13A1-213ENST00000520267 MAJINQ3KP22 176 aa19.7■□□□□ 0.74
COL13A1-213ENST00000520267 AMN1Q8IY45 258 aa19.7■□□□□ 0.74
COL13A1-213ENST00000520267 H3BUA1 57 aa19.69■□□□□ 0.74
COL13A1-213ENST00000520267 SMAD7O15105 426 aaKnown RBP19.69■□□□□ 0.74
COL13A1-213ENST00000520267 BRI3O95415 125 aa19.69■□□□□ 0.74
COL13A1-213ENST00000520267 RAB4AP20338 218 aa19.69■□□□□ 0.74
COL13A1-213ENST00000520267 FAM104BQ5XKR9 115 aa19.69■□□□□ 0.74
COL13A1-213ENST00000520267 MRPL53Q96EL3 112 aaKnown RBP19.69■□□□□ 0.74
COL13A1-213ENST00000520267 TMEM70Q9BUB7 260 aa19.69■□□□□ 0.74
COL13A1-213ENST00000520267 M0R143 59 aa19.69■□□□□ 0.74
COL13A1-213ENST00000520267 PF4V1P10720 104 aa19.69■□□□□ 0.74
COL13A1-213ENST00000520267 LCNL1Q6ZST4 164 aa19.69■□□□□ 0.74
COL13A1-213ENST00000520267 USMG5Q96IX5 58 aa19.69■□□□□ 0.74
COL13A1-213ENST00000520267 MAP1AP78559 2803 aaPredicted RBP19.69■□□□□ 0.74
COL13A1-213ENST00000520267 NDUFA4O00483 81 aa19.68■□□□□ 0.74
COL13A1-213ENST00000520267 LEPROTL1O95214 131 aa19.68■□□□□ 0.74
COL13A1-213ENST00000520267 USP24Q9UPU5 2620 aa19.68■□□□□ 0.74
COL13A1-213ENST00000520267 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.67■□□□□ 0.74
COL13A1-213ENST00000520267 D6R8Y8 96 aa19.67■□□□□ 0.74
COL13A1-213ENST00000520267 SLC25A16P16260 332 aa19.67■□□□□ 0.74
COL13A1-213ENST00000520267 C16orf92Q96LL3 132 aa19.67■□□□□ 0.74
COL13A1-213ENST00000520267 TWIST1Q15672 202 aa19.67■□□□□ 0.74
COL13A1-213ENST00000520267 U3KQK5 164 aa19.67■□□□□ 0.74
COL13A1-213ENST00000520267 MYO18BQ8IUG5 2567 aa19.66■□□□□ 0.74
COL13A1-213ENST00000520267 GATA3P23771 443 aa19.66■□□□□ 0.74
COL13A1-213ENST00000520267 LINC01559Q495D7 138 aa19.66■□□□□ 0.74
COL13A1-213ENST00000520267 DMRTA1Q5VZB9 504 aa19.66■□□□□ 0.74
COL13A1-213ENST00000520267 TMEM78Q5T7P6 136 aa19.65■□□□□ 0.74
COL13A1-213ENST00000520267 OR4X2Q8NGF9 303 aa19.65■□□□□ 0.74
COL13A1-213ENST00000520267 A0A096LNT2 108 aa19.65■□□□□ 0.74
COL13A1-213ENST00000520267 MRPL51Q4U2R6 128 aaKnown RBP19.65■□□□□ 0.74
COL13A1-213ENST00000520267 IGLV1-40P01703 118 aa19.64■□□□□ 0.74
COL13A1-213ENST00000520267 SRSF1Q07955 248 aaKnown RBP eCLIP19.64■□□□□ 0.74
COL13A1-213ENST00000520267 LINC01356Q8N9X3 169 aa19.64■□□□□ 0.74
COL13A1-213ENST00000520267 PRSS3P2Q8NHM4 247 aa19.64■□□□□ 0.74
COL13A1-213ENST00000520267 C20orf173Q96LM9 149 aa19.64■□□□□ 0.74
COL13A1-213ENST00000520267 MSRB1Q9NZV6 116 aa19.64■□□□□ 0.74
COL13A1-213ENST00000520267 CSMD2Q7Z408 3487 aa19.64■□□□□ 0.73
COL13A1-213ENST00000520267 SYS1-DBNDD2H3BUS1 97 aa19.64■□□□□ 0.73
COL13A1-213ENST00000520267 CRXO43186 299 aaPredicted RBP19.64■□□□□ 0.73
COL13A1-213ENST00000520267 OR5AL1P0C617 328 aa19.64■□□□□ 0.73
COL13A1-213ENST00000520267 IGLC3P0DOY3 106 aa19.64■□□□□ 0.73
COL13A1-213ENST00000520267 C9orf47Q6ZRZ4 202 aa19.64■□□□□ 0.73
COL13A1-213ENST00000520267 GPHB5Q86YW7 130 aa19.64■□□□□ 0.73
COL13A1-213ENST00000520267 C11orf21Q9P2W6 132 aa19.64■□□□□ 0.73
COL13A1-213ENST00000520267 COX6B1P14854 86 aa19.63■□□□□ 0.73
COL13A1-213ENST00000520267 PRELID3AQ96N28 172 aa19.63■□□□□ 0.73
COL13A1-213ENST00000520267 AP5S1Q9NUS5 200 aa19.63■□□□□ 0.73
COL13A1-213ENST00000520267 IGKV3D-20A0A0C4DH25 116 aa19.63■□□□□ 0.73
COL13A1-213ENST00000520267 DEFB112Q30KQ8 113 aa19.63■□□□□ 0.73
COL13A1-213ENST00000520267 MAPK1IP1LQ8NDC0 245 aa19.63■□□□□ 0.73
COL13A1-213ENST00000520267 TRAV9-2A0A087WT02 112 aa19.62■□□□□ 0.73
COL13A1-213ENST00000520267 A1L4Q6 167 aa19.62■□□□□ 0.73
COL13A1-213ENST00000520267 IFI27P40305 119 aaPredicted RBP19.62■□□□□ 0.73
COL13A1-213ENST00000520267 CFHR3Q02985 330 aa19.62■□□□□ 0.73
COL13A1-213ENST00000520267 FA2HQ7L5A8 372 aa19.62■□□□□ 0.73
COL13A1-213ENST00000520267 ORMDL3Q8N138 153 aa19.62■□□□□ 0.73
COL13A1-213ENST00000520267 TMEM95Q3KNT9 176 aa19.62■□□□□ 0.73
COL13A1-213ENST00000520267 FAM106AQ4KMX7 169 aa19.62■□□□□ 0.73
COL13A1-213ENST00000520267 CYB5R2Q6BCY4 276 aa19.62■□□□□ 0.73
COL13A1-213ENST00000520267 C9orf139Q6ZV77 190 aa19.62■□□□□ 0.73
COL13A1-213ENST00000520267 LOC389332A0A1B0GUA5 103 aa19.61■□□□□ 0.73
COL13A1-213ENST00000520267 IGHV4-59P01825 116 aa19.61■□□□□ 0.73
COL13A1-213ENST00000520267 HIST1H1AQ02539 215 aaPredicted RBP19.61■□□□□ 0.73
COL13A1-213ENST00000520267 CNFNQ9BYD5 112 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms