RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 RAB5CP51148 216 aa16.37■□□□□ 0.21
SKP1-206ENST00000519321 C1orf158Q8N1D5 194 aa16.37■□□□□ 0.21
SKP1-206ENST00000519321 MUC7Q8TAX7 377 aa16.37■□□□□ 0.21
SKP1-206ENST00000519321 FAM213BQ8TBF2 198 aa16.37■□□□□ 0.21
SKP1-206ENST00000519321 C20orf144Q9BQM9 153 aa16.37■□□□□ 0.21
SKP1-206ENST00000519321 A0A1W2PRE2 83 aa16.36■□□□□ 0.21
SKP1-206ENST00000519321 ERCC8Q13216 396 aa16.36■□□□□ 0.21
SKP1-206ENST00000519321 TMEM256Q8N2U0 113 aa16.36■□□□□ 0.21
SKP1-206ENST00000519321 Q8NAQ8 132 aa16.36■□□□□ 0.21
SKP1-206ENST00000519321 PLA2G2EQ9NZK7 142 aa16.36■□□□□ 0.21
SKP1-206ENST00000519321 TRAV12-2A0A075B6T6 113 aa16.35■□□□□ 0.21
SKP1-206ENST00000519321 IGHV4-28A0A0C4DH34 117 aa16.35■□□□□ 0.21
SKP1-206ENST00000519321 SERTM2A0A1B0GWG4 89 aa16.35■□□□□ 0.21
SKP1-206ENST00000519321 C3orf84H3BNL1 204 aa16.35■□□□□ 0.21
SKP1-206ENST00000519321 HBE1P02100 147 aa16.35■□□□□ 0.21
SKP1-206ENST00000519321 FGF8P55075 233 aaPredicted RBP16.35■□□□□ 0.21
SKP1-206ENST00000519321 C5orf17Q8NAS9 161 aa16.35■□□□□ 0.21
SKP1-206ENST00000519321 MBD3L1Q8WWY6 194 aa16.35■□□□□ 0.21
SKP1-206ENST00000519321 NKX6-2Q9C056 277 aaPredicted RBP16.35■□□□□ 0.21
SKP1-206ENST00000519321 ZNF492Q9P255 531 aa16.35■□□□□ 0.21
SKP1-206ENST00000519321 TRBV7-9A0A0J9YWB2 115 aa16.34■□□□□ 0.21
SKP1-206ENST00000519321 NMBP08949 121 aa16.34■□□□□ 0.21
SKP1-206ENST00000519321 FHITP49789 147 aa16.34■□□□□ 0.21
SKP1-206ENST00000519321 ZNF138P52744 262 aa16.34■□□□□ 0.21
SKP1-206ENST00000519321 SFT2D1Q8WV19 159 aa16.34■□□□□ 0.21
SKP1-206ENST00000519321 VGLL1Q99990 258 aa16.34■□□□□ 0.21
SKP1-206ENST00000519321 TMEM189A5PLL7 270 aa16.33■□□□□ 0.2
SKP1-206ENST00000519321 SUMO1P63165 101 aaKnown RBP16.33■□□□□ 0.2
SKP1-206ENST00000519321 FAM19A4Q96LR4 140 aa16.33■□□□□ 0.2
SKP1-206ENST00000519321 TMPRSS5Q9H3S3 457 aa16.33■□□□□ 0.2
SKP1-206ENST00000519321 RPH3ALQ9UNE2 315 aa16.33■□□□□ 0.2
SKP1-206ENST00000519321 LENEPQ9Y5L5 61 aa16.33■□□□□ 0.2
SKP1-206ENST00000519321 K7EQM0 130 aa16.32■□□□□ 0.2
SKP1-206ENST00000519321 H2AFB1P0C5Y9 115 aa16.32■□□□□ 0.2
SKP1-206ENST00000519321 CRISP2P16562 243 aa16.32■□□□□ 0.2
SKP1-206ENST00000519321 RRN3P1Q2M238 152 aa16.32■□□□□ 0.2
SKP1-206ENST00000519321 H7BYZ3 331 aa16.31■□□□□ 0.2
SKP1-206ENST00000519321 RBMY1A1P0DJD3 496 aaKnown RBP16.31■□□□□ 0.2
SKP1-206ENST00000519321 RBMY1CP0DJD4 496 aa16.31■□□□□ 0.2
SKP1-206ENST00000519321 SULT1A2P50226 295 aa16.31■□□□□ 0.2
SKP1-206ENST00000519321 RBMY1FQ15415 496 aaKnown RBP16.31■□□□□ 0.2
SKP1-206ENST00000519321 GFI1BQ5VTD9 330 aa16.31■□□□□ 0.2
SKP1-206ENST00000519321 LINC01587Q99440 93 aa16.31■□□□□ 0.2
SKP1-206ENST00000519321 ARL2-SNX15V9GYD0 113 aa16.31■□□□□ 0.2
SKP1-206ENST00000519321 KLLNB2CW77 178 aa16.3■□□□□ 0.2
SKP1-206ENST00000519321 GGTLC3B5MD39 225 aa16.3■□□□□ 0.2
SKP1-206ENST00000519321 TEX46H3BTG2 121 aa16.3■□□□□ 0.2
SKP1-206ENST00000519321 DEFB4AO15263 64 aa16.3■□□□□ 0.2
SKP1-206ENST00000519321 GPX1P07203 203 aa16.3■□□□□ 0.2
SKP1-206ENST00000519321 PPT1P50897 306 aa16.3■□□□□ 0.2
SKP1-206ENST00000519321 TAS2R60P59551 318 aa16.3■□□□□ 0.2
SKP1-206ENST00000519321 GOLT1AQ6ZVE7 132 aa16.3■□□□□ 0.2
SKP1-206ENST00000519321 NIPSNAP3BQ9BS92 247 aa16.3■□□□□ 0.2
SKP1-206ENST00000519321 EPDR1Q9UM22 224 aa16.3■□□□□ 0.2
SKP1-206ENST00000519321 FBLL1A6NHQ2 334 aaKnown RBP16.29■□□□□ 0.2
SKP1-206ENST00000519321 J3KRW8 73 aa16.29■□□□□ 0.2
SKP1-206ENST00000519321 TCRAP04437 139 aa16.29■□□□□ 0.2
SKP1-206ENST00000519321 UBE2G2P60604 165 aa16.29■□□□□ 0.2
SKP1-206ENST00000519321 C11orf45Q8TAV5 145 aa16.29■□□□□ 0.2
SKP1-206ENST00000519321 YTHDF2Q9Y5A9 579 aaKnown RBP16.29■□□□□ 0.2
SKP1-206ENST00000519321 LOC102723971A0A1B0GUV8 181 aa16.28■□□□□ 0.2
SKP1-206ENST00000519321 C7orf71A4D174 169 aa16.28■□□□□ 0.2
SKP1-206ENST00000519321 FAM74A7A6NL05 159 aa16.28■□□□□ 0.2
SKP1-206ENST00000519321 GNG5P63218 68 aa16.28■□□□□ 0.2
SKP1-206ENST00000519321 KIR3DS1Q14943 382 aa16.28■□□□□ 0.2
SKP1-206ENST00000519321 TRAV12-3A0A0B4J271 114 aa16.27■□□□□ 0.2
SKP1-206ENST00000519321 IFNA7P01567 189 aa16.27■□□□□ 0.2
SKP1-206ENST00000519321 NKX2-5P52952 324 aaPredicted RBP16.27■□□□□ 0.2
SKP1-206ENST00000519321 ZFAND2AQ8N6M9 145 aa16.27■□□□□ 0.2
SKP1-206ENST00000519321 CYB561D1Q8N8Q1 229 aa16.27■□□□□ 0.2
SKP1-206ENST00000519321 Q8TAT8 98 aa16.27■□□□□ 0.2
SKP1-206ENST00000519321 TCEAL7Q9BRU2 100 aa16.27■□□□□ 0.2
SKP1-206ENST00000519321 ATG101Q9BSB4 218 aa16.27■□□□□ 0.2
SKP1-206ENST00000519321 TRAV1-1A0A0B4J248 108 aa16.26■□□□□ 0.19
SKP1-206ENST00000519321 TEX48A0A1B0GUV7 120 aa16.26■□□□□ 0.19
SKP1-206ENST00000519321 HIST1H2BAQ96A08 127 aa16.26■□□□□ 0.19
SKP1-206ENST00000519321 PYGO2Q9BRQ0 406 aa16.26■□□□□ 0.19
SKP1-206ENST00000519321 CXorf65A6NEN9 183 aa16.25■□□□□ 0.19
SKP1-206ENST00000519321 ZNF705GA8MUZ8 300 aaPredicted RBP16.25■□□□□ 0.19
SKP1-206ENST00000519321 RNASE4P34096 147 aaKnown RBP16.25■□□□□ 0.19
SKP1-206ENST00000519321 CCDC28AQ8IWP9 274 aa16.25■□□□□ 0.19
SKP1-206ENST00000519321 NDFIP1Q9BT67 221 aa16.25■□□□□ 0.19
SKP1-206ENST00000519321 F6UZH7 168 aa16.24■□□□□ 0.19
SKP1-206ENST00000519321 BTN1A1Q13410 526 aa16.24■□□□□ 0.19
SKP1-206ENST00000519321 CST9LP1Q5W188 147 aa16.24■□□□□ 0.19
SKP1-206ENST00000519321 ZNF493Q6ZR52 646 aa16.24■□□□□ 0.19
SKP1-206ENST00000519321 TMEM75Q8N9X5 138 aa16.24■□□□□ 0.19
SKP1-206ENST00000519321 TRAV8-1A0A0A6YYK1 113 aa16.23■□□□□ 0.19
SKP1-206ENST00000519321 A0A1B0GV50 99 aa16.23■□□□□ 0.19
SKP1-206ENST00000519321 ZNF324O75467 553 aaPredicted RBP16.23■□□□□ 0.19
SKP1-206ENST00000519321 SPART-AS1P0CW21 52 aa16.23■□□□□ 0.19
SKP1-206ENST00000519321 HTN1P15515 57 aa16.23■□□□□ 0.19
SKP1-206ENST00000519321 EMP1P54849 157 aa16.23■□□□□ 0.19
SKP1-206ENST00000519321 CASC10Q5T4H9 136 aa16.23■□□□□ 0.19
SKP1-206ENST00000519321 C16orf74Q96GX8 76 aa16.23■□□□□ 0.19
SKP1-206ENST00000519321 PAGE4O60829 102 aa16.22■□□□□ 0.19
SKP1-206ENST00000519321 FLI1Q01543 452 aaPredicted RBP16.22■□□□□ 0.19
SKP1-206ENST00000519321 ZFAND6Q6FIF0 208 aa16.22■□□□□ 0.19
SKP1-206ENST00000519321 TMEM263Q8WUH6 116 aaKnown RBP16.22■□□□□ 0.19
SKP1-206ENST00000519321 LINC00467Q9BRT7 94 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms