RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 SMKR1H3BMG3 65 aa9.88□□□□□ -0.83
PCDHGA6-201ENST00000517434 SOCS3O14543 225 aa9.88□□□□□ -0.83
PCDHGA6-201ENST00000517434 PSPNO60542 156 aa9.88□□□□□ -0.83
PCDHGA6-201ENST00000517434 PRSS57Q6UWY2 283 aa9.88□□□□□ -0.83
PCDHGA6-201ENST00000517434 RASL10AQ92737 203 aa9.88□□□□□ -0.83
PCDHGA6-201ENST00000517434 PRADC1Q9BSG0 188 aa9.88□□□□□ -0.83
PCDHGA6-201ENST00000517434 FAM215AQ9Y5M1 114 aa9.88□□□□□ -0.83
PCDHGA6-201ENST00000517434 TRAV26-1A0A087WT03 109 aa9.88□□□□□ -0.83
PCDHGA6-201ENST00000517434 ZNF329Q86UD4 541 aa9.88□□□□□ -0.83
PCDHGA6-201ENST00000517434 PRO1854Q9UHT4 67 aa9.88□□□□□ -0.83
PCDHGA6-201ENST00000517434 FAM208BQ5VWN6 2430 aa9.88□□□□□ -0.83
PCDHGA6-201ENST00000517434 DEFB113Q30KQ7 82 aa9.88□□□□□ -0.83
PCDHGA6-201ENST00000517434 Q86TA4 180 aa9.88□□□□□ -0.83
PCDHGA6-201ENST00000517434 ANKRD29Q8N6D5 301 aa9.88□□□□□ -0.83
PCDHGA6-201ENST00000517434 TMEM126AQ9H061 195 aa9.88□□□□□ -0.83
PCDHGA6-201ENST00000517434 IGKV2-40A0A087WW87 121 aaPredicted RBP9.87□□□□□ -0.83
PCDHGA6-201ENST00000517434 IGKV2D-40P01614 121 aaPredicted RBP9.87□□□□□ -0.83
PCDHGA6-201ENST00000517434 IGLV1-44P01699 117 aa9.87□□□□□ -0.83
PCDHGA6-201ENST00000517434 FGF6P10767 208 aa9.87□□□□□ -0.83
PCDHGA6-201ENST00000517434 ZNF726P1Q15940 193 aa9.87□□□□□ -0.83
PCDHGA6-201ENST00000517434 LAMTOR3Q9UHA4 124 aa9.87□□□□□ -0.83
PCDHGA6-201ENST00000517434 H0YJW9 148 aa9.87□□□□□ -0.83
PCDHGA6-201ENST00000517434 TMEM258P61165 79 aa9.87□□□□□ -0.83
PCDHGA6-201ENST00000517434 FAM104BQ5XKR9 115 aa9.87□□□□□ -0.83
PCDHGA6-201ENST00000517434 HAPLN4Q86UW8 402 aa9.87□□□□□ -0.83
PCDHGA6-201ENST00000517434 MRAPQ8TCY5 172 aa9.87□□□□□ -0.83
PCDHGA6-201ENST00000517434 PRO3102Q9H379 93 aa9.87□□□□□ -0.83
PCDHGA6-201ENST00000517434 IGKV1D-17A0A075B6S4 117 aa9.87□□□□□ -0.83
PCDHGA6-201ENST00000517434 IGKV1-27A0A075B6S5 117 aa9.87□□□□□ -0.83
PCDHGA6-201ENST00000517434 PAX4O43316 350 aa9.87□□□□□ -0.83
PCDHGA6-201ENST00000517434 RPL15P61313 204 aaKnown RBP9.87□□□□□ -0.83
PCDHGA6-201ENST00000517434 VWC2Q2TAL6 325 aa9.87□□□□□ -0.83
PCDHGA6-201ENST00000517434 C12orf74Q32Q52 190 aa9.87□□□□□ -0.83
PCDHGA6-201ENST00000517434 LINC00479Q96M42 142 aa9.87□□□□□ -0.83
PCDHGA6-201ENST00000517434 SIGLEC9Q9Y336 463 aa9.87□□□□□ -0.83
PCDHGA6-201ENST00000517434 PKDREJQ9NTG1 2253 aa9.87□□□□□ -0.83
PCDHGA6-201ENST00000517434 CFHR2P36980 270 aa9.87□□□□□ -0.83
PCDHGA6-201ENST00000517434 ZNF415Q09FC8 603 aa9.87□□□□□ -0.83
PCDHGA6-201ENST00000517434 TIMM21Q9BVV7 248 aa9.87□□□□□ -0.83
PCDHGA6-201ENST00000517434 ANAPC10Q9UM13 185 aa9.87□□□□□ -0.83
PCDHGA6-201ENST00000517434 LRRK1Q38SD2 2015 aa9.86□□□□□ -0.83
PCDHGA6-201ENST00000517434 CRYBA4P53673 196 aa9.86□□□□□ -0.83
PCDHGA6-201ENST00000517434 SMIM27A0A1W2PRY6 76 aa9.86□□□□□ -0.83
PCDHGA6-201ENST00000517434 LEPROTO15243 131 aa9.86□□□□□ -0.83
PCDHGA6-201ENST00000517434 ANXA2RQ3ZCQ2 193 aa9.86□□□□□ -0.83
PCDHGA6-201ENST00000517434 ZNF625Q96I27 306 aaPredicted RBP9.86□□□□□ -0.83
PCDHGA6-201ENST00000517434 ACACBO00763 2458 aa9.86□□□□□ -0.83
PCDHGA6-201ENST00000517434 IGLV3-9A0A075B6K5 115 aa9.86□□□□□ -0.83
PCDHGA6-201ENST00000517434 PRSS47A8MTI9 375 aa9.86□□□□□ -0.83
PCDHGA6-201ENST00000517434 NTN5Q8WTR8 489 aaPredicted RBP9.86□□□□□ -0.83
PCDHGA6-201ENST00000517434 CYYR1Q96J86 154 aa9.86□□□□□ -0.83
PCDHGA6-201ENST00000517434 K7ERJ3 54 aa9.86□□□□□ -0.83
PCDHGA6-201ENST00000517434 HLA-DMBP28068 263 aa9.86□□□□□ -0.83
PCDHGA6-201ENST00000517434 J3KT08 172 aa9.85□□□□□ -0.83
PCDHGA6-201ENST00000517434 PAX9P55771 341 aa9.85□□□□□ -0.83
PCDHGA6-201ENST00000517434 ZNF876PQ49A33 203 aa9.85□□□□□ -0.83
PCDHGA6-201ENST00000517434 Q6P435 159 aa9.85□□□□□ -0.83
PCDHGA6-201ENST00000517434 RCHY1Q96PM5 261 aa9.85□□□□□ -0.83
PCDHGA6-201ENST00000517434 DAZ1Q9NQZ3 744 aaKnown RBP9.85□□□□□ -0.83
PCDHGA6-201ENST00000517434 LINC00527Q9UJ94 153 aa9.85□□□□□ -0.83
PCDHGA6-201ENST00000517434 C11orf52Q96A22 123 aa9.85□□□□□ -0.83
PCDHGA6-201ENST00000517434 JPT2Q9H910 190 aa9.85□□□□□ -0.83
PCDHGA6-201ENST00000517434 CREBBPQ92793 2442 aa9.85□□□□□ -0.83
PCDHGA6-201ENST00000517434 IGLC1P0CG04 106 aa9.85□□□□□ -0.83
PCDHGA6-201ENST00000517434 PRB3Q04118 309 aaPredicted RBP9.84□□□□□ -0.83
PCDHGA6-201ENST00000517434 DAZAP2Q15038 168 aaPredicted RBP9.84□□□□□ -0.83
PCDHGA6-201ENST00000517434 LY6G5BQ8NDX9 201 aa9.84□□□□□ -0.83
PCDHGA6-201ENST00000517434 PROK2Q9HC23 129 aa9.84□□□□□ -0.83
PCDHGA6-201ENST00000517434 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.84□□□□□ -0.83
PCDHGA6-201ENST00000517434 NPYP01303 97 aa9.84□□□□□ -0.83
PCDHGA6-201ENST00000517434 IGHG4P01861 327 aa9.84□□□□□ -0.83
PCDHGA6-201ENST00000517434 LYPD2Q6UXB3 125 aa9.84□□□□□ -0.83
PCDHGA6-201ENST00000517434 SH2D6Q7Z4S9 175 aa9.84□□□□□ -0.83
PCDHGA6-201ENST00000517434 Q8N8P6 123 aa9.84□□□□□ -0.83
PCDHGA6-201ENST00000517434 ZNF114Q8NC26 417 aa9.84□□□□□ -0.83
PCDHGA6-201ENST00000517434 INSP01308 110 aa9.84□□□□□ -0.83
PCDHGA6-201ENST00000517434 RNF144BQ7Z419 303 aa9.84□□□□□ -0.83
PCDHGA6-201ENST00000517434 LINC00477Q96M19 166 aa9.84□□□□□ -0.83
PCDHGA6-201ENST00000517434 KIAA1671Q9BY89 1806 aa9.84□□□□□ -0.83
PCDHGA6-201ENST00000517434 ELANEP08246 267 aa9.84□□□□□ -0.83
PCDHGA6-201ENST00000517434 MORN5Q5VZ52 161 aa9.84□□□□□ -0.83
PCDHGA6-201ENST00000517434 C8orf86Q6ZUL3 223 aa9.84□□□□□ -0.83
PCDHGA6-201ENST00000517434 FAM110DQ8TAY7 271 aaPredicted RBP9.84□□□□□ -0.83
PCDHGA6-201ENST00000517434 UBL5Q9BZL1 73 aa9.84□□□□□ -0.83
PCDHGA6-201ENST00000517434 KAAG1Q9UBP8 84 aa9.84□□□□□ -0.83
PCDHGA6-201ENST00000517434 TRAV3A0A0B4J244 114 aa9.83□□□□□ -0.84
PCDHGA6-201ENST00000517434 LINC01619G3V211 115 aa9.83□□□□□ -0.84
PCDHGA6-201ENST00000517434 LMO1P25800 156 aa9.83□□□□□ -0.84
PCDHGA6-201ENST00000517434 C10orf55Q5SWW7 151 aa9.83□□□□□ -0.84
PCDHGA6-201ENST00000517434 LY6HO94772 140 aa9.83□□□□□ -0.84
PCDHGA6-201ENST00000517434 IL15RAQ13261 267 aa9.83□□□□□ -0.84
PCDHGA6-201ENST00000517434 TEX36Q5VZQ5 186 aa9.83□□□□□ -0.84
PCDHGA6-201ENST00000517434 LINC00311Q8N616 119 aa9.83□□□□□ -0.84
PCDHGA6-201ENST00000517434 GLMPQ8WWB7 406 aa9.83□□□□□ -0.84
PCDHGA6-201ENST00000517434 SIGLEC8Q9NYZ4 499 aa9.83□□□□□ -0.84
PCDHGA6-201ENST00000517434 C5orf42Q9H799 3197 aa9.83□□□□□ -0.84
PCDHGA6-201ENST00000517434 PLXNB3Q9ULL4 1909 aa9.83□□□□□ -0.84
PCDHGA6-201ENST00000517434 PRSS46E5RG02 174 aa9.83□□□□□ -0.84
PCDHGA6-201ENST00000517434 SYNJ2BPP57105 145 aa9.83□□□□□ -0.84
PCDHGA6-201ENST00000517434 RBM3P98179 157 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms