RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 ICE1Q9Y2F5 2266 aa1.32□□□□□ -2.2
SCARNA3-201ENST00000517097 UHRF1BP1LA0JNW5 1464 aa1.32□□□□□ -2.2
SCARNA3-201ENST00000517097 ZNF518AQ6AHZ1 1483 aa1.32□□□□□ -2.2
SCARNA3-201ENST00000517097 BCL9LQ86UU0 1499 aa1.32□□□□□ -2.2
SCARNA3-201ENST00000517097 LAMB4A4D0S4 1761 aa1.32□□□□□ -2.2
SCARNA3-201ENST00000517097 DISP1Q96F81 1524 aa1.32□□□□□ -2.2
SCARNA3-201ENST00000517097 TRAV27A0A087WT01 109 aa1.32□□□□□ -2.2
SCARNA3-201ENST00000517097 IGKV3D-11A0A0A0MRZ8 115 aa1.32□□□□□ -2.2
SCARNA3-201ENST00000517097 SPRR5A0A1B0GTR4 108 aa1.32□□□□□ -2.2
SCARNA3-201ENST00000517097 FAM92AA1XBS5 289 aa1.32□□□□□ -2.2
SCARNA3-201ENST00000517097 CCL4P13236 92 aa1.32□□□□□ -2.2
SCARNA3-201ENST00000517097 HIST1H1BP16401 226 aaKnown RBP1.32□□□□□ -2.2
SCARNA3-201ENST00000517097 LSM3P62310 102 aaKnown RBP1.32□□□□□ -2.2
SCARNA3-201ENST00000517097 BLCAPP62952 87 aa1.32□□□□□ -2.2
SCARNA3-201ENST00000517097 CDK6Q00534 326 aa1.32□□□□□ -2.2
SCARNA3-201ENST00000517097 WHAMMP3Q1A5X7 153 aa1.32□□□□□ -2.2
SCARNA3-201ENST00000517097 LCE3EQ5T5B0 92 aa1.32□□□□□ -2.2
SCARNA3-201ENST00000517097 TEN1Q86WV5 123 aa1.32□□□□□ -2.2
SCARNA3-201ENST00000517097 LINC00311Q8N616 119 aa1.32□□□□□ -2.2
SCARNA3-201ENST00000517097 SPACA4Q8TDM5 124 aa1.32□□□□□ -2.2
SCARNA3-201ENST00000517097 CLEC2BQ92478 149 aa1.32□□□□□ -2.2
SCARNA3-201ENST00000517097 TMEM203Q969S6 136 aa1.32□□□□□ -2.2
SCARNA3-201ENST00000517097 RAB37Q96AX2 223 aa1.32□□□□□ -2.2
SCARNA3-201ENST00000517097 MUCL1Q96DR8 90 aa1.32□□□□□ -2.2
SCARNA3-201ENST00000517097 NABP2Q9BQ15 211 aa1.32□□□□□ -2.2
SCARNA3-201ENST00000517097 NAA38Q9BRA0 125 aaKnown RBP1.32□□□□□ -2.2
SCARNA3-201ENST00000517097 SMARCA2P51531 1590 aa1.32□□□□□ -2.2
SCARNA3-201ENST00000517097 INTS1Q8N201 2190 aaKnown RBP1.32□□□□□ -2.2
SCARNA3-201ENST00000517097 COL1A2P08123 1366 aa1.32□□□□□ -2.2
SCARNA3-201ENST00000517097 ERBINQ96RT1 1412 aa1.32□□□□□ -2.2
SCARNA3-201ENST00000517097 AKAP12Q02952 1782 aa1.31□□□□□ -2.2
SCARNA3-201ENST00000517097 ZGRF1Q86YA3 2104 aa1.31□□□□□ -2.2
SCARNA3-201ENST00000517097 TNRC6BQ9UPQ9 1833 aaKnown RBP1.31□□□□□ -2.2
SCARNA3-201ENST00000517097 UNC13CQ8NB66 2214 aa1.31□□□□□ -2.2
SCARNA3-201ENST00000517097 ZFHX2Q9C0A1 2572 aaPredicted RBP1.31□□□□□ -2.2
SCARNA3-201ENST00000517097 LOC107986453A0A1B0GWG9 222 aa1.31□□□□□ -2.2
SCARNA3-201ENST00000517097 FAM25AB3EWG3 89 aa1.31□□□□□ -2.2
SCARNA3-201ENST00000517097 FAM25CB3EWG5 89 aa1.31□□□□□ -2.2
SCARNA3-201ENST00000517097 FAM25GB3EWG6 89 aa1.31□□□□□ -2.2
SCARNA3-201ENST00000517097 IFNGP01579 166 aa1.31□□□□□ -2.2
SCARNA3-201ENST00000517097 TRACP01848 142 aa1.31□□□□□ -2.2
SCARNA3-201ENST00000517097 PRB2P02812 416 aaPredicted RBP1.31□□□□□ -2.2
SCARNA3-201ENST00000517097 CD3DP04234 171 aa1.31□□□□□ -2.2
SCARNA3-201ENST00000517097 CD14P08571 375 aa1.31□□□□□ -2.2
SCARNA3-201ENST00000517097 SAA1P0DJI8 122 aaPredicted RBP1.31□□□□□ -2.2
SCARNA3-201ENST00000517097 S100PP25815 95 aa1.31□□□□□ -2.2
SCARNA3-201ENST00000517097 DSCR4P56555 118 aaPredicted RBP1.31□□□□□ -2.2
SCARNA3-201ENST00000517097 CIRBPQ14011 172 aaKnown RBP1.31□□□□□ -2.2
SCARNA3-201ENST00000517097 ELOBQ15370 118 aa1.31□□□□□ -2.2
SCARNA3-201ENST00000517097 HCP5Q6MZN7 132 aa1.31□□□□□ -2.2
SCARNA3-201ENST00000517097 GLIPR1L1Q6UWM5 242 aa1.31□□□□□ -2.2
SCARNA3-201ENST00000517097 RPS19BP1Q86WX3 136 aaKnown RBP1.31□□□□□ -2.2
SCARNA3-201ENST00000517097 TMEM254Q8TBM7 123 aa1.31□□□□□ -2.2
SCARNA3-201ENST00000517097 CST9LQ9H4G1 147 aa1.31□□□□□ -2.2
SCARNA3-201ENST00000517097 METTL1Q9UBP6 276 aaKnown RBP1.31□□□□□ -2.2
SCARNA3-201ENST00000517097 DNAJC15Q9Y5T4 150 aa1.31□□□□□ -2.2
SCARNA3-201ENST00000517097 NOTCH2Q04721 2471 aa1.31□□□□□ -2.2
SCARNA3-201ENST00000517097 COL5A3P25940 1745 aaPredicted RBP1.31□□□□□ -2.2
SCARNA3-201ENST00000517097 BCORL1Q5H9F3 1711 aa1.31□□□□□ -2.2
SCARNA3-201ENST00000517097 TMEM2Q9UHN6 1383 aa1.31□□□□□ -2.2
SCARNA3-201ENST00000517097 ARFGEF3Q5TH69 2177 aa1.31□□□□□ -2.2
SCARNA3-201ENST00000517097 ADGRB1O14514 1584 aa1.3□□□□□ -2.2
SCARNA3-201ENST00000517097 CUL9Q8IWT3 2517 aa1.3□□□□□ -2.2
SCARNA3-201ENST00000517097 PCNX2A6NKB5 2137 aa1.3□□□□□ -2.2
SCARNA3-201ENST00000517097 A0A087WSZ3 146 aa1.3□□□□□ -2.2
SCARNA3-201ENST00000517097 TRAV10A0A0B4J240 114 aa1.3□□□□□ -2.2
SCARNA3-201ENST00000517097 TRAV12-1A0A0B4J245 112 aa1.3□□□□□ -2.2
SCARNA3-201ENST00000517097 TRGV4A0A0C4DH28 118 aa1.3□□□□□ -2.2
SCARNA3-201ENST00000517097 A0A1W2PNU3 283 aaPredicted RBP1.3□□□□□ -2.2
SCARNA3-201ENST00000517097 C2orf70A6NJV1 201 aa1.3□□□□□ -2.2
SCARNA3-201ENST00000517097 E7EUB6 86 aa1.3□□□□□ -2.2
SCARNA3-201ENST00000517097 C5orf67F2Z3F1 127 aa1.3□□□□□ -2.2
SCARNA3-201ENST00000517097 H3BRN7 92 aa1.3□□□□□ -2.2
SCARNA3-201ENST00000517097 M0R129 80 aa1.3□□□□□ -2.2
SCARNA3-201ENST00000517097 IGKV1-17P01599 117 aa1.3□□□□□ -2.2
SCARNA3-201ENST00000517097 ZNF25P17030 456 aaPredicted RBP1.3□□□□□ -2.2
SCARNA3-201ENST00000517097 AZU1P20160 251 aa1.3□□□□□ -2.2
SCARNA3-201ENST00000517097 PCBD1P61457 104 aa1.3□□□□□ -2.2
SCARNA3-201ENST00000517097 PLGLB1Q02325 96 aa1.3□□□□□ -2.2
SCARNA3-201ENST00000517097 Q1T7F1 81 aa1.3□□□□□ -2.2
SCARNA3-201ENST00000517097 CLLU1Q5K131 121 aa1.3□□□□□ -2.2
SCARNA3-201ENST00000517097 ARPINQ7Z6K5 226 aa1.3□□□□□ -2.2
SCARNA3-201ENST00000517097 C10orf111Q8N326 155 aa1.3□□□□□ -2.2
SCARNA3-201ENST00000517097 OR5AK2Q8NH90 309 aa1.3□□□□□ -2.2
SCARNA3-201ENST00000517097 SFT2D1Q8WV19 159 aa1.3□□□□□ -2.2
SCARNA3-201ENST00000517097 PSMF1Q92530 271 aa1.3□□□□□ -2.2
SCARNA3-201ENST00000517097 TMEM191AQ9H0A3 160 aa1.3□□□□□ -2.2
SCARNA3-201ENST00000517097 SLC35B3Q9H1N7 401 aa1.3□□□□□ -2.2
SCARNA3-201ENST00000517097 GNG8Q9UK08 70 aa1.3□□□□□ -2.2
SCARNA3-201ENST00000517097 LSM2Q9Y333 95 aaKnown RBP1.3□□□□□ -2.2
SCARNA3-201ENST00000517097 PARP14Q460N5 1801 aa1.3□□□□□ -2.2
SCARNA3-201ENST00000517097 RGS12O14924 1447 aa1.3□□□□□ -2.2
SCARNA3-201ENST00000517097 MBD5Q9P267 1494 aa1.3□□□□□ -2.2
SCARNA3-201ENST00000517097 ESPL1Q14674 2120 aa1.3□□□□□ -2.2
SCARNA3-201ENST00000517097 ADGRB3O60242 1522 aa1.3□□□□□ -2.2
SCARNA3-201ENST00000517097 DLG5Q8TDM6 1919 aa1.29□□□□□ -2.2
SCARNA3-201ENST00000517097 IGKV1D-17A0A075B6S4 117 aa1.29□□□□□ -2.2
SCARNA3-201ENST00000517097 A0A0G2JMM0 328 aa1.29□□□□□ -2.2
SCARNA3-201ENST00000517097 A0A1W2PPB8 328 aa1.29□□□□□ -2.2
SCARNA3-201ENST00000517097 TCRBV4S1A1TA0A5B7 111 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms