RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 ACOT13Q9NPJ3 140 aa2□□□□□ -2.09
CHD1-211ENST00000514344 MACF1Q9UPN3 7388 aaKnown RBP2□□□□□ -2.09
CHD1-211ENST00000514344 NOTOA8MTQ0 251 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 MPDU1O75352 247 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 TSPAN13O95857 204 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 FABP1P07148 127 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 RCVRNP35243 200 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 DEFA3P59666 94 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 SPCS3P61009 180 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 RRAS2P62070 204 aaPredicted RBP1.99□□□□□ -2.09
CHD1-211ENST00000514344 SRSF9Q13242 221 aaKnown RBP eCLIP1.99□□□□□ -2.09
CHD1-211ENST00000514344 DGAT2L7PQ6IED9 249 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 ZFP1Q6P2D0 407 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 CLPSL2Q6UWE3 100 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 DHRS11Q6UWP2 260 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 IQCF2Q8IXL9 164 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 OR10G4Q8NGN3 311 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 LHFPL5Q8TAF8 219 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 GPR82Q96P67 336 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 SOSTQ9BQB4 213 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 CDIP1Q9H305 208 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 PSORS1C2Q9UIG4 136 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 C3orf85A0A1B0GTC6 90 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 WRBO00258 174 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 SLC17A3O00476 420 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 GPX1P07203 203 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 OR10J4P0C629 311 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 RPL7P18124 248 aaKnown RBP1.99□□□□□ -2.09
CHD1-211ENST00000514344 LEPP41159 167 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 MLLT11Q13015 90 aaPredicted RBP1.99□□□□□ -2.09
CHD1-211ENST00000514344 MAJINQ3KP22 176 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 LYSMD2Q8IV50 215 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 LGI3Q8N145 548 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 ZNF664Q8N3J9 261 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 OR4D10Q8NGI6 311 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 Q8TAT8 98 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 MARCH1Q8TCQ1 289 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 C2orf50Q96LR7 162 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 CNBD2Q96M20 576 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 LINC00479Q96M42 142 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 ARL6Q9H0F7 186 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 TXNL4BQ9NX01 149 aaKnown RBP1.99□□□□□ -2.09
CHD1-211ENST00000514344 PLAC8Q9NZF1 115 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 COMMD3Q9UBI1 195 aa1.99□□□□□ -2.09
CHD1-211ENST00000514344 CCSO14618 274 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 SLC25A5P05141 298 aaKnown RBP1.98□□□□□ -2.09
CHD1-211ENST00000514344 GATA1P15976 413 aaPredicted RBP1.98□□□□□ -2.09
CHD1-211ENST00000514344 RANBP1P43487 201 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 POLR2GP62487 172 aaKnown RBP eCLIP1.98□□□□□ -2.09
CHD1-211ENST00000514344 SPANXN5Q5MJ07 72 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 STPG4Q8N801 248 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 TMEM75Q8N9X5 138 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 DTD1Q8TEA8 209 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 RAB2BQ8WUD1 216 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 SAT2Q96F10 170 aaPredicted RBP1.98□□□□□ -2.09
CHD1-211ENST00000514344 RNF185Q96GF1 192 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 OR51M1Q9H341 326 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 ZNF331Q9NQX6 463 aaPredicted RBP1.98□□□□□ -2.09
CHD1-211ENST00000514344 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.98□□□□□ -2.09
CHD1-211ENST00000514344 IGHV1OR15-1A0A075B7D0 117 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 A0A087WX48 190 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 C5orf51A6NDU8 294 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 CD3DP04234 171 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 LINC00869P0C866 280 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 PRSS3P35030 304 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 COX6A2Q02221 97 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 LPCAT3Q6P1A2 487 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 CROCCP3Q8IVE0 287 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 BPIFCQ8NFQ6 507 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 RASL10AQ92737 203 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 PRADC1Q9BSG0 188 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 TRAV4A0A0B4J268 109 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 hDV102S1A0JD36 115 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 H3BRN7 92 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 RAB5CP51148 216 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 AQP4P55087 323 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 TAS2R46P59540 309 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 RPL19P84098 196 aaKnown RBP1.98□□□□□ -2.09
CHD1-211ENST00000514344 SLC38A11Q08AI6 406 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 OPCMLQ14982 345 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 NEDD8Q15843 81 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 TMEM183BQ1AE95 376 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 RNASE10Q5GAN6 216 aaKnown RBP1.98□□□□□ -2.09
CHD1-211ENST00000514344 NMSQ5H8A3 153 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 PRR9Q5T870 116 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 GGNBP1Q5YKI7 109 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 NIT1Q86X76 327 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 TMEM183AQ8IXX5 376 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 OR2T35Q8NGX2 323 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 OR1S1Q8NH92 325 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 S100A16Q96FQ6 103 aaKnown RBP1.98□□□□□ -2.09
CHD1-211ENST00000514344 TRGV9Q99603 122 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 Q9UF83 564 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 TPRKBQ9Y3C4 175 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 MUC17Q685J3 4493 aa1.98□□□□□ -2.09
CHD1-211ENST00000514344 IGHV3-64A0A075B6Q5 118 aa1.97□□□□□ -2.09
CHD1-211ENST00000514344 IGKV2-40A0A087WW87 121 aaPredicted RBP1.97□□□□□ -2.09
CHD1-211ENST00000514344 TRAV1-2A0A0B4J238 106 aa1.97□□□□□ -2.09
CHD1-211ENST00000514344 GAGE12JA6NER3 117 aa1.97□□□□□ -2.09
CHD1-211ENST00000514344 KLLNB2CW77 178 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms