RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 RD3LP0DJH9 198 aa6.34□□□□□ -1.39
NUP54-211ENST00000512151 FHITP49789 147 aa6.34□□□□□ -1.39
NUP54-211ENST00000512151 RELQ04864 619 aaPredicted RBP6.34□□□□□ -1.39
NUP54-211ENST00000512151 PEA15Q15121 130 aa6.34□□□□□ -1.39
NUP54-211ENST00000512151 USF2Q15853 346 aaPredicted RBP6.34□□□□□ -1.39
NUP54-211ENST00000512151 MIC13Q5XKP0 118 aa6.34□□□□□ -1.39
NUP54-211ENST00000512151 PATE2Q6UY27 113 aa6.34□□□□□ -1.39
NUP54-211ENST00000512151 ZNF705AQ6ZN79 300 aaPredicted RBP6.34□□□□□ -1.39
NUP54-211ENST00000512151 C15orf53Q8NAA6 179 aa6.34□□□□□ -1.39
NUP54-211ENST00000512151 OR51G1Q8NGK1 321 aa6.34□□□□□ -1.39
NUP54-211ENST00000512151 FAM213BQ8TBF2 198 aa6.34□□□□□ -1.39
NUP54-211ENST00000512151 Q8WTZ3 238 aa6.34□□□□□ -1.39
NUP54-211ENST00000512151 PSMG3Q9BT73 122 aaPredicted RBP6.34□□□□□ -1.39
NUP54-211ENST00000512151 RSG1Q9BU20 258 aa6.34□□□□□ -1.39
NUP54-211ENST00000512151 PBDC1Q9BVG4 233 aa6.34□□□□□ -1.39
NUP54-211ENST00000512151 NPCDR1Q9BY65 106 aa6.34□□□□□ -1.39
NUP54-211ENST00000512151 KRTAP9-8Q9BYQ0 159 aa6.34□□□□□ -1.39
NUP54-211ENST00000512151 VSIRQ9H7M9 311 aa6.34□□□□□ -1.39
NUP54-211ENST00000512151 RABAC1Q9UI14 185 aa6.34□□□□□ -1.39
NUP54-211ENST00000512151 TRAV1-1A0A0B4J248 108 aa6.33□□□□□ -1.4
NUP54-211ENST00000512151 ZNF705FA8MVS1 300 aaPredicted RBP6.33□□□□□ -1.4
NUP54-211ENST00000512151 C9JQL5 133 aa6.33□□□□□ -1.4
NUP54-211ENST00000512151 K7EQG2 157 aa6.33□□□□□ -1.4
NUP54-211ENST00000512151 YIF1AO95070 293 aa6.33□□□□□ -1.4
NUP54-211ENST00000512151 ZNF688P0C7X2 276 aa6.33□□□□□ -1.4
NUP54-211ENST00000512151 ZNF705DP0CH99 300 aaPredicted RBP6.33□□□□□ -1.4
NUP54-211ENST00000512151 ZNF705BP0CI00 300 aaPredicted RBP6.33□□□□□ -1.4
NUP54-211ENST00000512151 GUK1Q16774 197 aa6.33□□□□□ -1.4
NUP54-211ENST00000512151 AKR1C8PQ5T2L2 129 aa6.33□□□□□ -1.4
NUP54-211ENST00000512151 Q6ZRN7 208 aaPredicted RBP6.33□□□□□ -1.4
NUP54-211ENST00000512151 SCGB1C1Q8TD33 95 aa6.33□□□□□ -1.4
NUP54-211ENST00000512151 NEU1Q99519 415 aa6.33□□□□□ -1.4
NUP54-211ENST00000512151 TIMM9Q9Y5J7 89 aa6.33□□□□□ -1.4
NUP54-211ENST00000512151 LRP2P98164 4655 aa6.33□□□□□ -1.4
NUP54-211ENST00000512151 FAM74A7A6NL05 159 aa6.32□□□□□ -1.4
NUP54-211ENST00000512151 MPDU1O75352 247 aa6.32□□□□□ -1.4
NUP54-211ENST00000512151 NDUFS6O75380 124 aaKnown RBP6.32□□□□□ -1.4
NUP54-211ENST00000512151 HBE1P02100 147 aa6.32□□□□□ -1.4
NUP54-211ENST00000512151 IL4P05112 153 aa6.32□□□□□ -1.4
NUP54-211ENST00000512151 H2AFB1P0C5Y9 115 aa6.32□□□□□ -1.4
NUP54-211ENST00000512151 RPL29P47914 159 aaKnown RBP6.32□□□□□ -1.4
NUP54-211ENST00000512151 PLP1P60201 277 aa6.32□□□□□ -1.4
NUP54-211ENST00000512151 LYZP61626 148 aa6.32□□□□□ -1.4
NUP54-211ENST00000512151 SERF2P84101 59 aa6.32□□□□□ -1.4
NUP54-211ENST00000512151 FAM74A3Q4VXF1 159 aa6.32□□□□□ -1.4
NUP54-211ENST00000512151 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.32□□□□□ -1.4
NUP54-211ENST00000512151 TMEM37Q8WXS4 190 aa6.32□□□□□ -1.4
NUP54-211ENST00000512151 RNF125Q96EQ8 232 aa6.32□□□□□ -1.4
NUP54-211ENST00000512151 Q9H8V8 135 aa6.32□□□□□ -1.4
NUP54-211ENST00000512151 SLC39A9Q9NUM3 307 aa6.32□□□□□ -1.4
NUP54-211ENST00000512151 DOK5Q9P104 306 aa6.32□□□□□ -1.4
NUP54-211ENST00000512151 PXMP4Q9Y6I8 212 aa6.32□□□□□ -1.4
NUP54-211ENST00000512151 U3KQE9 123 aa6.32□□□□□ -1.4
NUP54-211ENST00000512151 LOC105371267A0A1B0GV96 52 aa6.31□□□□□ -1.4
NUP54-211ENST00000512151 TMEM189A5PLL7 270 aa6.31□□□□□ -1.4
NUP54-211ENST00000512151 NUDT3O95989 172 aa6.31□□□□□ -1.4
NUP54-211ENST00000512151 ORM2P19652 201 aa6.31□□□□□ -1.4
NUP54-211ENST00000512151 CRYBB3P26998 211 aa6.31□□□□□ -1.4
NUP54-211ENST00000512151 RAB2AP61019 212 aa6.31□□□□□ -1.4
NUP54-211ENST00000512151 SELENOTP62341 195 aa6.31□□□□□ -1.4
NUP54-211ENST00000512151 RPL11P62913 178 aaKnown RBP6.31□□□□□ -1.4
NUP54-211ENST00000512151 GCSAMLQ5JQS6 135 aa6.31□□□□□ -1.4
NUP54-211ENST00000512151 MORN5Q5VZ52 161 aa6.31□□□□□ -1.4
NUP54-211ENST00000512151 CLRN3Q8NCR9 226 aa6.31□□□□□ -1.4
NUP54-211ENST00000512151 MBD3L1Q8WWY6 194 aa6.31□□□□□ -1.4
NUP54-211ENST00000512151 GRAMD2BQ96HH9 432 aa6.31□□□□□ -1.4
NUP54-211ENST00000512151 EIF5A2Q9GZV4 153 aaKnown RBP6.31□□□□□ -1.4
NUP54-211ENST00000512151 Q9H3A6 140 aa6.31□□□□□ -1.4
NUP54-211ENST00000512151 PKHD1L1Q86WI1 4243 aa6.31□□□□□ -1.4
NUP54-211ENST00000512151 IGHV3OR16-12A0A075B7B8 117 aa6.31□□□□□ -1.4
NUP54-211ENST00000512151 RBFOX3A6NFN3 312 aa6.31□□□□□ -1.4
NUP54-211ENST00000512151 SCGB2A1O75556 95 aa6.31□□□□□ -1.4
NUP54-211ENST00000512151 EIF3GO75821 320 aaKnown RBP eCLIP6.31□□□□□ -1.4
NUP54-211ENST00000512151 FABP1P07148 127 aa6.31□□□□□ -1.4
NUP54-211ENST00000512151 PPT1P50897 306 aa6.31□□□□□ -1.4
NUP54-211ENST00000512151 B2MP61769 119 aa6.31□□□□□ -1.4
NUP54-211ENST00000512151 CCL20P78556 96 aa6.31□□□□□ -1.4
NUP54-211ENST00000512151 RAB31Q13636 194 aa6.31□□□□□ -1.4
NUP54-211ENST00000512151 ZNF506Q5JVG8 444 aa6.31□□□□□ -1.4
NUP54-211ENST00000512151 CDPF1Q6NVV7 123 aa6.31□□□□□ -1.4
NUP54-211ENST00000512151 SSX7Q7RTT5 188 aa6.31□□□□□ -1.4
NUP54-211ENST00000512151 STXBP6Q8NFX7 210 aa6.31□□□□□ -1.4
NUP54-211ENST00000512151 OR1B1Q8NGR6 318 aa6.31□□□□□ -1.4
NUP54-211ENST00000512151 DCANP1Q8TF63 244 aa6.31□□□□□ -1.4
NUP54-211ENST00000512151 UHRF2Q96PU4 802 aa6.31□□□□□ -1.4
NUP54-211ENST00000512151 SLC35B3Q9H1N7 401 aa6.31□□□□□ -1.4
NUP54-211ENST00000512151 YTHDF2Q9Y5A9 579 aaKnown RBP6.31□□□□□ -1.4
NUP54-211ENST00000512151 TRAV5A0A0B4J249 113 aa6.3□□□□□ -1.4
NUP54-211ENST00000512151 C17orf112F2Z3M2 114 aa6.3□□□□□ -1.4
NUP54-211ENST00000512151 BUB3O43684 328 aa6.3□□□□□ -1.4
NUP54-211ENST00000512151 HYPMO75409 117 aa6.3□□□□□ -1.4
NUP54-211ENST00000512151 OR5G3P0C626 314 aa6.3□□□□□ -1.4
NUP54-211ENST00000512151 DNAH10OSP0CZ25 163 aa6.3□□□□□ -1.4
NUP54-211ENST00000512151 NPPCP23582 126 aa6.3□□□□□ -1.4
NUP54-211ENST00000512151 CCL18P55774 89 aa6.3□□□□□ -1.4
NUP54-211ENST00000512151 FXYD7P58549 80 aa6.3□□□□□ -1.4
NUP54-211ENST00000512151 LINC00315P59091 139 aa6.3□□□□□ -1.4
NUP54-211ENST00000512151 DAD1P61803 113 aa6.3□□□□□ -1.4
NUP54-211ENST00000512151 FFAR4Q5NUL3 377 aa6.3□□□□□ -1.4
NUP54-211ENST00000512151 SPATA31B1PQ5VZV4 182 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms