RNA–Protein interactions for RNA: ENST00000512070.6

TRIO-218, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 8,907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-218ENST00000512070 DMRTC2Q8IXT2 367 aaPredicted RBP11.74□□□□□ -0.53
TRIO-218ENST00000512070 PNRC2Q9NPJ4 139 aaKnown RBP11.74□□□□□ -0.53
TRIO-218ENST00000512070 PSPNO60542 156 aa11.73□□□□□ -0.53
TRIO-218ENST00000512070 C2orf66Q6UXQ4 117 aa11.73□□□□□ -0.53
TRIO-218ENST00000512070 ZNF114Q8NC26 417 aa11.73□□□□□ -0.53
TRIO-218ENST00000512070 NSUN5P1Q3KNT7 163 aa11.73□□□□□ -0.53
TRIO-218ENST00000512070 PCDH15Q96QU1 1955 aa11.73□□□□□ -0.53
TRIO-218ENST00000512070 HLA-DRB4P13762 266 aa11.73□□□□□ -0.53
TRIO-218ENST00000512070 DEFB121Q5J5C9 76 aa11.73□□□□□ -0.53
TRIO-218ENST00000512070 HLA-DRB4X5D2U9 266 aa11.73□□□□□ -0.53
TRIO-218ENST00000512070 MBD3L4A6NDZ8 208 aaPredicted RBP11.73□□□□□ -0.53
TRIO-218ENST00000512070 MBD3L3A6NE82 208 aaPredicted RBP11.73□□□□□ -0.53
TRIO-218ENST00000512070 MBD3L5A6NJ08 208 aaPredicted RBP11.73□□□□□ -0.53
TRIO-218ENST00000512070 K7EP34 96 aa11.73□□□□□ -0.53
TRIO-218ENST00000512070 ARMS2P0C7Q2 107 aa11.73□□□□□ -0.53
TRIO-218ENST00000512070 MBD3L2Q8NHZ7 208 aaPredicted RBP11.73□□□□□ -0.53
TRIO-218ENST00000512070 TMEM243Q9BU79 118 aa11.73□□□□□ -0.53
TRIO-218ENST00000512070 IGHV3-73A0A0B4J1V6 119 aa11.73□□□□□ -0.53
TRIO-218ENST00000512070 GATA4P43694 442 aa11.73□□□□□ -0.53
TRIO-218ENST00000512070 BMPERQ8N8U9 685 aa11.73□□□□□ -0.53
TRIO-218ENST00000512070 SMIM27A0A1W2PRY6 76 aa11.72□□□□□ -0.53
TRIO-218ENST00000512070 CD177Q8N6Q3 437 aa11.72□□□□□ -0.53
TRIO-218ENST00000512070 Q8TAT8 98 aa11.72□□□□□ -0.53
TRIO-218ENST00000512070 ATP6V0BQ99437 205 aa11.72□□□□□ -0.53
TRIO-218ENST00000512070 K7EP13 123 aa11.71□□□□□ -0.53
TRIO-218ENST00000512070 FGF6P10767 208 aa11.71□□□□□ -0.53
TRIO-218ENST00000512070 GAFA1Q96PS6 74 aa11.71□□□□□ -0.53
TRIO-218ENST00000512070 POU2AF1Q16633 256 aa11.71□□□□□ -0.53
TRIO-218ENST00000512070 NOTCH4Q99466 2003 aa11.71□□□□□ -0.53
TRIO-218ENST00000512070 A0A1W2PPM0 123 aa11.71□□□□□ -0.53
TRIO-218ENST00000512070 LINC00473A8K010 186 aa11.71□□□□□ -0.54
TRIO-218ENST00000512070 CDKN1BP46527 198 aa11.71□□□□□ -0.54
TRIO-218ENST00000512070 RHOHQ15669 191 aa11.71□□□□□ -0.54
TRIO-218ENST00000512070 CEND1Q8N111 149 aa11.71□□□□□ -0.54
TRIO-218ENST00000512070 FAM110DQ8TAY7 271 aaPredicted RBP11.71□□□□□ -0.54
TRIO-218ENST00000512070 UBE2E1P51965 193 aa11.71□□□□□ -0.54
TRIO-218ENST00000512070 SPACA3Q8IXA5 215 aa11.7□□□□□ -0.54
TRIO-218ENST00000512070 ANKRD29Q8N6D5 301 aa11.7□□□□□ -0.54
TRIO-218ENST00000512070 RNF152Q8N8N0 203 aa11.7□□□□□ -0.54
TRIO-218ENST00000512070 TMEM219Q86XT9 240 aa11.7□□□□□ -0.54
TRIO-218ENST00000512070 Q6ZVH6 145 aa11.7□□□□□ -0.54
TRIO-218ENST00000512070 ZNF625Q96I27 306 aaPredicted RBP11.7□□□□□ -0.54
TRIO-218ENST00000512070 NDUFA4L2Q9NRX3 87 aa11.69□□□□□ -0.54
TRIO-218ENST00000512070 LENEPQ9Y5L5 61 aa11.69□□□□□ -0.54
TRIO-218ENST00000512070 LCNL1Q6ZST4 164 aa11.69□□□□□ -0.54
TRIO-218ENST00000512070 LMO1P25800 156 aa11.69□□□□□ -0.54
TRIO-218ENST00000512070 MCRIP2Q9BUT9 160 aaKnown RBP11.69□□□□□ -0.54
TRIO-218ENST00000512070 EPOPA6NHQ4 379 aa11.69□□□□□ -0.54
TRIO-218ENST00000512070 A0A087WWL8 130 aa11.69□□□□□ -0.54
TRIO-218ENST00000512070 SAA4P35542 130 aa11.69□□□□□ -0.54
TRIO-218ENST00000512070 BDP1A6H8Y1 2624 aa11.69□□□□□ -0.54
TRIO-218ENST00000512070 C10orf55Q5SWW7 151 aa11.69□□□□□ -0.54
TRIO-218ENST00000512070 FOXL2NBQ6ZUU3 175 aa11.69□□□□□ -0.54
TRIO-218ENST00000512070 NDUFA4O00483 81 aa11.68□□□□□ -0.54
TRIO-218ENST00000512070 TCF15Q12870 199 aa11.68□□□□□ -0.54
TRIO-218ENST00000512070 HS3ST6Q96QI5 342 aa11.68□□□□□ -0.54
TRIO-218ENST00000512070 A0A1W2PPI3 338 aa11.68□□□□□ -0.54
TRIO-218ENST00000512070 DAD1P61803 113 aa11.68□□□□□ -0.54
TRIO-218ENST00000512070 POLR3KQ9Y2Y1 108 aaPredicted RBP11.68□□□□□ -0.54
TRIO-218ENST00000512070 SDHAF1A6NFY7 115 aa11.68□□□□□ -0.54
TRIO-218ENST00000512070 NDPQ00604 133 aa11.68□□□□□ -0.54
TRIO-218ENST00000512070 ZNF493Q6ZR52 646 aa11.68□□□□□ -0.54
TRIO-218ENST00000512070 PRSS47A8MTI9 375 aa11.68□□□□□ -0.54
TRIO-218ENST00000512070 CRLF1O75462 422 aa11.68□□□□□ -0.54
TRIO-218ENST00000512070 TRBV19A0A075B6N1 114 aa11.68□□□□□ -0.54
TRIO-218ENST00000512070 GAGE12HA6NDE8 117 aa11.68□□□□□ -0.54
TRIO-218ENST00000512070 RPL35AP18077 110 aaKnown RBP11.68□□□□□ -0.54
TRIO-218ENST00000512070 HERV-K104P63124 156 aa11.68□□□□□ -0.54
TRIO-218ENST00000512070 PCNX3Q9H6A9 2034 aa11.68□□□□□ -0.54
TRIO-218ENST00000512070 NDUFA12Q9UI09 145 aa11.68□□□□□ -0.54
TRIO-218ENST00000512070 J3QLI3 93 aa11.67□□□□□ -0.54
TRIO-218ENST00000512070 Q8TCH9 128 aa11.67□□□□□ -0.54
TRIO-218ENST00000512070 IGHV1OR15-1A0A075B7D0 117 aa11.67□□□□□ -0.54
TRIO-218ENST00000512070 DOPEY1Q5JWR5 2465 aa11.67□□□□□ -0.54
TRIO-218ENST00000512070 NAA38Q9BRA0 125 aaKnown RBP11.67□□□□□ -0.54
TRIO-218ENST00000512070 MUC6Q6W4X9 2439 aa11.67□□□□□ -0.54
TRIO-218ENST00000512070 NDUFC2O95298 119 aa11.67□□□□□ -0.54
TRIO-218ENST00000512070 FUSP35637 526 aaKnown RBP eCLIP11.67□□□□□ -0.54
TRIO-218ENST00000512070 MUC4Q99102 2169 aa11.67□□□□□ -0.54
TRIO-218ENST00000512070 IGLC2P0DOY2 106 aa11.67□□□□□ -0.54
TRIO-218ENST00000512070 IGLC3P0DOY3 106 aa11.67□□□□□ -0.54
TRIO-218ENST00000512070 LTBRP36941 435 aa11.67□□□□□ -0.54
TRIO-218ENST00000512070 IGKV1D-17A0A075B6S4 117 aa11.67□□□□□ -0.54
TRIO-218ENST00000512070 TRAV3A0A0B4J244 114 aa11.67□□□□□ -0.54
TRIO-218ENST00000512070 C10orf91Q5T1B1 145 aa11.67□□□□□ -0.54
TRIO-218ENST00000512070 SMIM2Q9BVW6 85 aa11.67□□□□□ -0.54
TRIO-218ENST00000512070 ZNF134P52741 427 aa11.66□□□□□ -0.54
TRIO-218ENST00000512070 FOXG1P55316 489 aaPredicted RBP11.66□□□□□ -0.54
TRIO-218ENST00000512070 LINC00311Q8N616 119 aa11.66□□□□□ -0.54
TRIO-218ENST00000512070 E9PQ18 207 aa11.66□□□□□ -0.54
TRIO-218ENST00000512070 HAMPP81172 84 aa11.66□□□□□ -0.54
TRIO-218ENST00000512070 KLF5Q13887 457 aaPredicted RBP11.66□□□□□ -0.54
TRIO-218ENST00000512070 ZNF833PQ6ZTB9 187 aa11.66□□□□□ -0.54
TRIO-218ENST00000512070 SMIM20Q8N5G0 67 aa11.66□□□□□ -0.54
TRIO-218ENST00000512070 H3BUA1 57 aa11.66□□□□□ -0.54
TRIO-218ENST00000512070 RBAKDNA6NC62 111 aa11.66□□□□□ -0.54
TRIO-218ENST00000512070 SH2D6Q7Z4S9 175 aa11.66□□□□□ -0.54
TRIO-218ENST00000512070 GAGE12JA6NER3 117 aa11.65□□□□□ -0.54
TRIO-218ENST00000512070 GAGE7O76087 117 aa11.65□□□□□ -0.54
TRIO-218ENST00000512070 GAGE12FP0CL80 117 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms