RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 OR10G7Q8NGN6 311 aa11.44□□□□□ -0.58
PDLIM5-212ENST00000509333 TNFSF18Q9UNG2 199 aa11.44□□□□□ -0.58
PDLIM5-212ENST00000509333 A0A1W2PPV4 95 aa11.43□□□□□ -0.58
PDLIM5-212ENST00000509333 RNF222A6NCQ9 220 aa11.43□□□□□ -0.58
PDLIM5-212ENST00000509333 KLLNB2CW77 178 aa11.43□□□□□ -0.58
PDLIM5-212ENST00000509333 J3KRW8 73 aa11.43□□□□□ -0.58
PDLIM5-212ENST00000509333 SLC25A5P05141 298 aaKnown RBP11.43□□□□□ -0.58
PDLIM5-212ENST00000509333 ATP6V0CP27449 155 aa11.43□□□□□ -0.58
PDLIM5-212ENST00000509333 RAB2AP61019 212 aa11.43□□□□□ -0.58
PDLIM5-212ENST00000509333 HSD17B11Q8NBQ5 300 aa11.43□□□□□ -0.58
PDLIM5-212ENST00000509333 INO80EQ8NBZ0 244 aaPredicted RBP11.43□□□□□ -0.58
PDLIM5-212ENST00000509333 OR2G3Q8NGZ4 309 aa11.43□□□□□ -0.58
PDLIM5-212ENST00000509333 PSMG3Q9BT73 122 aaPredicted RBP11.43□□□□□ -0.58
PDLIM5-212ENST00000509333 ZNF492Q9P255 531 aa11.43□□□□□ -0.58
PDLIM5-212ENST00000509333 IGKV2-40A0A087WW87 121 aaPredicted RBP11.42□□□□□ -0.58
PDLIM5-212ENST00000509333 IGKV2D-40P01614 121 aaPredicted RBP11.42□□□□□ -0.58
PDLIM5-212ENST00000509333 NMBP08949 121 aa11.42□□□□□ -0.58
PDLIM5-212ENST00000509333 CRISP2P16562 243 aa11.42□□□□□ -0.58
PDLIM5-212ENST00000509333 DAD1P61803 113 aa11.42□□□□□ -0.58
PDLIM5-212ENST00000509333 SERF2P84101 59 aa11.42□□□□□ -0.58
PDLIM5-212ENST00000509333 CD300CQ08708 224 aa11.42□□□□□ -0.58
PDLIM5-212ENST00000509333 KHDC3LQ587J8 217 aa11.42□□□□□ -0.58
PDLIM5-212ENST00000509333 RNASE8Q8TDE3 154 aaKnown RBP11.42□□□□□ -0.58
PDLIM5-212ENST00000509333 FAM210BQ96KR6 192 aa11.42□□□□□ -0.58
PDLIM5-212ENST00000509333 Q9H3A6 140 aa11.42□□□□□ -0.58
PDLIM5-212ENST00000509333 EPPK1P58107 5090 aaKnown RBP11.42□□□□□ -0.58
PDLIM5-212ENST00000509333 DNAH10Q8IVF4 4471 aa11.41□□□□□ -0.58
PDLIM5-212ENST00000509333 RNASE4P34096 147 aaKnown RBP11.41□□□□□ -0.58
PDLIM5-212ENST00000509333 UBE2L3P68036 154 aaKnown RBP11.41□□□□□ -0.58
PDLIM5-212ENST00000509333 PQLC2Q6ZP29 291 aa11.41□□□□□ -0.58
PDLIM5-212ENST00000509333 ZFAND2AQ8N6M9 145 aa11.41□□□□□ -0.58
PDLIM5-212ENST00000509333 C16orf74Q96GX8 76 aa11.41□□□□□ -0.58
PDLIM5-212ENST00000509333 NDUFAF3Q9BU61 184 aa11.41□□□□□ -0.58
PDLIM5-212ENST00000509333 TIMM8BQ9Y5J9 83 aaPredicted RBP11.41□□□□□ -0.58
PDLIM5-212ENST00000509333 FXYD6-FXYD2A0A087WZ82 144 aa11.4□□□□□ -0.58
PDLIM5-212ENST00000509333 C7orf71A4D174 169 aa11.4□□□□□ -0.58
PDLIM5-212ENST00000509333 PGPA6NDG6 321 aa11.4□□□□□ -0.58
PDLIM5-212ENST00000509333 CBY3A6NI87 242 aa11.4□□□□□ -0.58
PDLIM5-212ENST00000509333 DIRC3C9JPN6 131 aa11.4□□□□□ -0.58
PDLIM5-212ENST00000509333 HMGB3O15347 200 aaKnown RBP11.4□□□□□ -0.58
PDLIM5-212ENST00000509333 DEFB130BP0DP73 79 aa11.4□□□□□ -0.58
PDLIM5-212ENST00000509333 DEFB130AP0DP74 79 aa11.4□□□□□ -0.58
PDLIM5-212ENST00000509333 CSN1S1P47710 185 aa11.4□□□□□ -0.58
PDLIM5-212ENST00000509333 TMEM78Q5T7P6 136 aa11.4□□□□□ -0.58
PDLIM5-212ENST00000509333 RPL7L1Q6DKI1 246 aaKnown RBP11.4□□□□□ -0.58
PDLIM5-212ENST00000509333 CCDC28AQ8IWP9 274 aa11.4□□□□□ -0.58
PDLIM5-212ENST00000509333 RXFP4Q8TDU9 374 aa11.4□□□□□ -0.58
PDLIM5-212ENST00000509333 TMEM263Q8WUH6 116 aaKnown RBP11.4□□□□□ -0.58
PDLIM5-212ENST00000509333 PYGO2Q9BRQ0 406 aa11.4□□□□□ -0.58
PDLIM5-212ENST00000509333 NOP10Q9NPE3 64 aaKnown RBP11.4□□□□□ -0.58
PDLIM5-212ENST00000509333 OTORQ9NRC9 128 aa11.4□□□□□ -0.58
PDLIM5-212ENST00000509333 TRBV7-9A0A0J9YWB2 115 aa11.39□□□□□ -0.59
PDLIM5-212ENST00000509333 RBAKDNA6NC62 111 aa11.39□□□□□ -0.59
PDLIM5-212ENST00000509333 MBP02144 154 aa11.39□□□□□ -0.59
PDLIM5-212ENST00000509333 GPX1P07203 203 aa11.39□□□□□ -0.59
PDLIM5-212ENST00000509333 STAG3L2P0CL84 134 aa11.39□□□□□ -0.59
PDLIM5-212ENST00000509333 STAG3L3P0CL85 134 aa11.39□□□□□ -0.59
PDLIM5-212ENST00000509333 HTN3P15516 51 aa11.39□□□□□ -0.59
PDLIM5-212ENST00000509333 ZNF138P52744 262 aa11.39□□□□□ -0.59
PDLIM5-212ENST00000509333 Q6ZQT7 251 aa11.39□□□□□ -0.59
PDLIM5-212ENST00000509333 SUN5Q8TC36 379 aa11.39□□□□□ -0.59
PDLIM5-212ENST00000509333 RAB24Q969Q5 203 aa11.39□□□□□ -0.59
PDLIM5-212ENST00000509333 LINC00467Q9BRT7 94 aa11.39□□□□□ -0.59
PDLIM5-212ENST00000509333 SH3BGRL3Q9H299 93 aa11.39□□□□□ -0.59
PDLIM5-212ENST00000509333 BTN1A1Q13410 526 aa11.38□□□□□ -0.59
PDLIM5-212ENST00000509333 ARL6IP6Q8N6S5 226 aa11.38□□□□□ -0.59
PDLIM5-212ENST00000509333 LINC00612Q8N6U2 182 aa11.38□□□□□ -0.59
PDLIM5-212ENST00000509333 CYTL1Q9NRR1 136 aa11.38□□□□□ -0.59
PDLIM5-212ENST00000509333 BORCS7-ASMTA0A0B4J1R7 106 aa11.37□□□□□ -0.59
PDLIM5-212ENST00000509333 CDC34P49427 236 aaPredicted RBP11.37□□□□□ -0.59
PDLIM5-212ENST00000509333 PRR9Q5T870 116 aa11.37□□□□□ -0.59
PDLIM5-212ENST00000509333 GNPNAT1Q96EK6 184 aaPredicted RBP11.37□□□□□ -0.59
PDLIM5-212ENST00000509333 HYLS1Q96M11 299 aa11.37□□□□□ -0.59
PDLIM5-212ENST00000509333 DNAH6Q9C0G6 4158 aa11.36□□□□□ -0.59
PDLIM5-212ENST00000509333 SMLR1H3BR10 107 aa11.36□□□□□ -0.59
PDLIM5-212ENST00000509333 TAAR5O14804 337 aa11.36□□□□□ -0.59
PDLIM5-212ENST00000509333 ARL14EPLP0DKL9 152 aa11.36□□□□□ -0.59
PDLIM5-212ENST00000509333 DAZ2Q13117 558 aaKnown RBP11.36□□□□□ -0.59
PDLIM5-212ENST00000509333 ANXA2RQ3ZCQ2 193 aa11.36□□□□□ -0.59
PDLIM5-212ENST00000509333 ACTR3CQ9C0K3 210 aaPredicted RBP11.36□□□□□ -0.59
PDLIM5-212ENST00000509333 ARPC5O15511 151 aa11.35□□□□□ -0.59
PDLIM5-212ENST00000509333 P0DMU3 169 aa11.35□□□□□ -0.59
PDLIM5-212ENST00000509333 FAM231AP0DMU4 169 aa11.35□□□□□ -0.59
PDLIM5-212ENST00000509333 FAM231CP0DMU5 169 aa11.35□□□□□ -0.59
PDLIM5-212ENST00000509333 GCHFRP30047 84 aa11.35□□□□□ -0.59
PDLIM5-212ENST00000509333 TMEM88Q6PEY1 159 aa11.35□□□□□ -0.59
PDLIM5-212ENST00000509333 EIF4E3Q8N5X7 224 aaKnown RBP11.35□□□□□ -0.59
PDLIM5-212ENST00000509333 POM121L12Q8N7R1 296 aa11.35□□□□□ -0.59
PDLIM5-212ENST00000509333 C11orf72Q8NBR9 251 aa11.35□□□□□ -0.59
PDLIM5-212ENST00000509333 Q8TAT8 98 aa11.35□□□□□ -0.59
PDLIM5-212ENST00000509333 TMED6Q8WW62 240 aa11.35□□□□□ -0.59
PDLIM5-212ENST00000509333 LENEPQ9Y5L5 61 aa11.35□□□□□ -0.59
PDLIM5-212ENST00000509333 F5H768 121 aa11.34□□□□□ -0.59
PDLIM5-212ENST00000509333 ATP5G1P05496 136 aa11.34□□□□□ -0.59
PDLIM5-212ENST00000509333 ATP5G3P48201 142 aa11.34□□□□□ -0.59
PDLIM5-212ENST00000509333 FAM74A1Q5RGS3 127 aa11.34□□□□□ -0.59
PDLIM5-212ENST00000509333 SSX7Q7RTT5 188 aa11.34□□□□□ -0.59
PDLIM5-212ENST00000509333 OR11H4Q8NGC9 324 aa11.34□□□□□ -0.59
PDLIM5-212ENST00000509333 CMTM2Q8TAZ6 248 aa11.34□□□□□ -0.59
PDLIM5-212ENST00000509333 GSN-AS1Q9NRJ2 163 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms