RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 MIA2Q96PC5 1412 aa-0.11□□□□□ -2.43
GYPB-209ENST00000508618 CCDC168Q8NDH2 2452 aa-0.11□□□□□ -2.43
GYPB-209ENST00000508618 ITPR3Q14573 2671 aa-0.11□□□□□ -2.43
GYPB-209ENST00000508618 PCNX1Q96RV3 2341 aa-0.11□□□□□ -2.43
GYPB-209ENST00000508618 CAMSAP1Q5T5Y3 1602 aa-0.11□□□□□ -2.43
GYPB-209ENST00000508618 ODAMA1E959 279 aa-0.11□□□□□ -2.43
GYPB-209ENST00000508618 C9orf170A2RU37 121 aa-0.11□□□□□ -2.43
GYPB-209ENST00000508618 HIST1H2BKO60814 126 aa-0.11□□□□□ -2.43
GYPB-209ENST00000508618 IGHV3-30P01768 117 aa-0.11□□□□□ -2.43
GYPB-209ENST00000508618 APOA2P02652 100 aa-0.11□□□□□ -2.43
GYPB-209ENST00000508618 HIST1H2BJP06899 126 aa-0.11□□□□□ -2.43
GYPB-209ENST00000508618 CTXN2P0C2S0 81 aa-0.11□□□□□ -2.43
GYPB-209ENST00000508618 IGHV3-30-5P0DP03 117 aa-0.11□□□□□ -2.43
GYPB-209ENST00000508618 CAV3P56539 151 aa-0.11□□□□□ -2.43
GYPB-209ENST00000508618 NCALDP61601 193 aa-0.11□□□□□ -2.43
GYPB-209ENST00000508618 ITGB3BPQ13352 177 aaPredicted RBP-0.11□□□□□ -2.43
GYPB-209ENST00000508618 TAF1AQ15573 450 aaPredicted RBP-0.11□□□□□ -2.43
GYPB-209ENST00000508618 GRPEL2Q8TAA5 225 aa-0.11□□□□□ -2.43
GYPB-209ENST00000508618 CST11Q9H112 138 aa-0.11□□□□□ -2.43
GYPB-209ENST00000508618 ARMC1Q9NVT9 282 aa-0.11□□□□□ -2.43
GYPB-209ENST00000508618 SRCAPQ6ZRS2 3230 aa-0.11□□□□□ -2.43
GYPB-209ENST00000508618 IGSF10Q6WRI0 2623 aa-0.11□□□□□ -2.43
GYPB-209ENST00000508618 KIAA1549LQ6ZVL6 1849 aa-0.11□□□□□ -2.43
GYPB-209ENST00000508618 EPG5Q9HCE0 2579 aa-0.11□□□□□ -2.43
GYPB-209ENST00000508618 CTTNBP2Q8WZ74 1663 aa-0.11□□□□□ -2.43
GYPB-209ENST00000508618 ITPR1Q14643 2758 aa-0.11□□□□□ -2.43
GYPB-209ENST00000508618 COL14A1Q05707 1796 aaKnown RBP-0.11□□□□□ -2.43
GYPB-209ENST00000508618 KIAA1107Q9UPP5 1409 aa-0.12□□□□□ -2.43
GYPB-209ENST00000508618 WNK2Q9Y3S1 2297 aa-0.12□□□□□ -2.43
GYPB-209ENST00000508618 FAM186AA6NE01 2351 aa-0.12□□□□□ -2.43
GYPB-209ENST00000508618 TPRP12270 2363 aaKnown RBP-0.12□□□□□ -2.43
GYPB-209ENST00000508618 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.12□□□□□ -2.43
GYPB-209ENST00000508618 AFDNP55196 1824 aaKnown RBP-0.12□□□□□ -2.43
GYPB-209ENST00000508618 RER1O15258 196 aa-0.12□□□□□ -2.43
GYPB-209ENST00000508618 KALRNO60229 2985 aa-0.12□□□□□ -2.43
GYPB-209ENST00000508618 BANF1O75531 89 aa-0.12□□□□□ -2.43
GYPB-209ENST00000508618 PIAS1O75925 651 aa-0.12□□□□□ -2.43
GYPB-209ENST00000508618 LY6G6CO95867 125 aa-0.12□□□□□ -2.43
GYPB-209ENST00000508618 ARPP19P56211 112 aa-0.12□□□□□ -2.43
GYPB-209ENST00000508618 MIR22HGQ0VDD5 57 aa-0.12□□□□□ -2.43
GYPB-209ENST00000508618 Q5VSD8 79 aa-0.12□□□□□ -2.43
GYPB-209ENST00000508618 FKBP1CQ5VVH2 108 aa-0.12□□□□□ -2.43
GYPB-209ENST00000508618 FOXI2Q6ZQN5 318 aa-0.12□□□□□ -2.43
GYPB-209ENST00000508618 MCEEQ96PE7 176 aa-0.12□□□□□ -2.43
GYPB-209ENST00000508618 LIMD2Q9BT23 127 aa-0.12□□□□□ -2.43
GYPB-209ENST00000508618 C9orf16Q9BUW7 83 aa-0.12□□□□□ -2.43
GYPB-209ENST00000508618 SH3BGRL3Q9H299 93 aa-0.12□□□□□ -2.43
GYPB-209ENST00000508618 MXRA5Q9NR99 2828 aa-0.12□□□□□ -2.43
GYPB-209ENST00000508618 ANKRD31Q8N7Z5 1873 aa-0.12□□□□□ -2.43
GYPB-209ENST00000508618 TRPM7Q96QT4 1865 aa-0.12□□□□□ -2.43
GYPB-209ENST00000508618 NBEAL1Q6ZS30 2694 aa-0.12□□□□□ -2.43
GYPB-209ENST00000508618 MYCBP2O75592 4640 aa-0.12□□□□□ -2.43
GYPB-209ENST00000508618 CD109Q6YHK3 1445 aa-0.13□□□□□ -2.43
GYPB-209ENST00000508618 MAP2P11137 1827 aaKnown RBP-0.13□□□□□ -2.43
GYPB-209ENST00000508618 MYO15AQ9UKN7 3530 aa-0.13□□□□□ -2.43
GYPB-209ENST00000508618 LYSTQ99698 3801 aa-0.13□□□□□ -2.43
GYPB-209ENST00000508618 WDFY4Q6ZS81 3184 aa-0.13□□□□□ -2.43
GYPB-209ENST00000508618 SRRM2Q9UQ35 2752 aaKnown RBP-0.13□□□□□ -2.43
GYPB-209ENST00000508618 USP54Q70EL1 1684 aa-0.13□□□□□ -2.43
GYPB-209ENST00000508618 PKD1P98161 4303 aa-0.13□□□□□ -2.43
GYPB-209ENST00000508618 RTL9Q8NET4 1388 aa-0.13□□□□□ -2.43
GYPB-209ENST00000508618 PRORSD1PA6NEY8 169 aa-0.13□□□□□ -2.43
GYPB-209ENST00000508618 G3V2T6 193 aa-0.13□□□□□ -2.43
GYPB-209ENST00000508618 TRGC2P03986 189 aa-0.13□□□□□ -2.43
GYPB-209ENST00000508618 IDO1P14902 403 aa-0.13□□□□□ -2.43
GYPB-209ENST00000508618 OGNP20774 298 aaKnown RBP-0.13□□□□□ -2.43
GYPB-209ENST00000508618 RPL37P61927 97 aaKnown RBP-0.13□□□□□ -2.43
GYPB-209ENST00000508618 FADDQ13158 208 aa-0.13□□□□□ -2.43
GYPB-209ENST00000508618 TMED2Q15363 201 aa-0.13□□□□□ -2.43
GYPB-209ENST00000508618 C1orf140Q5VVS0 124 aa-0.13□□□□□ -2.43
GYPB-209ENST00000508618 XAF1Q6GPH4 301 aa-0.13□□□□□ -2.43
GYPB-209ENST00000508618 PHF5AQ7RTV0 110 aaKnown RBP-0.13□□□□□ -2.43
GYPB-209ENST00000508618 FAM216BQ8N7L0 139 aa-0.13□□□□□ -2.43
GYPB-209ENST00000508618 C5orf17Q8NAS9 161 aa-0.13□□□□□ -2.43
GYPB-209ENST00000508618 NUP35Q8NFH5 326 aa-0.13□□□□□ -2.43
GYPB-209ENST00000508618 MALSU1Q96EH3 234 aa-0.13□□□□□ -2.43
GYPB-209ENST00000508618 SPRR2FQ96RM1 72 aa-0.13□□□□□ -2.43
GYPB-209ENST00000508618 RTL8AQ9BWD3 113 aa-0.13□□□□□ -2.43
GYPB-209ENST00000508618 LYRM2Q9NU23 88 aaPredicted RBP-0.13□□□□□ -2.43
GYPB-209ENST00000508618 FLNCQ14315 2725 aa-0.13□□□□□ -2.43
GYPB-209ENST00000508618 GVINP1Q7Z2Y8 2422 aa-0.13□□□□□ -2.43
GYPB-209ENST00000508618 SPG11Q96JI7 2443 aa-0.13□□□□□ -2.43
GYPB-209ENST00000508618 BOD1L1Q8NFC6 3051 aa-0.13□□□□□ -2.43
GYPB-209ENST00000508618 C2CD3Q4AC94 2353 aa-0.13□□□□□ -2.43
GYPB-209ENST00000508618 ADGRL3Q9HAR2 1447 aa-0.13□□□□□ -2.43
GYPB-209ENST00000508618 LAMA2P24043 3122 aaKnown RBP-0.13□□□□□ -2.43
GYPB-209ENST00000508618 DYNC1H1Q14204 4646 aaKnown RBP-0.14□□□□□ -2.43
GYPB-209ENST00000508618 UTP20O75691 2785 aaKnown RBP-0.14□□□□□ -2.43
GYPB-209ENST00000508618 USP9YO00507 2555 aaPredicted RBP-0.14□□□□□ -2.43
GYPB-209ENST00000508618 LAMA5O15230 3695 aa-0.14□□□□□ -2.43
GYPB-209ENST00000508618 ZFHX4Q86UP3 3567 aa-0.14□□□□□ -2.43
GYPB-209ENST00000508618 RIIAD1A6NNX1 92 aa-0.14□□□□□ -2.43
GYPB-209ENST00000508618 H7C1C5 153 aa-0.14□□□□□ -2.43
GYPB-209ENST00000508618 SULT1C4O75897 302 aa-0.14□□□□□ -2.43
GYPB-209ENST00000508618 TMBIM6P55061 237 aa-0.14□□□□□ -2.43
GYPB-209ENST00000508618 LCN6P62502 163 aa-0.14□□□□□ -2.43
GYPB-209ENST00000508618 AKR1C8PQ5T2L2 129 aa-0.14□□□□□ -2.43
GYPB-209ENST00000508618 LYG2Q86SG7 212 aa-0.14□□□□□ -2.43
GYPB-209ENST00000508618 LINC00269Q8N2A0 174 aa-0.14□□□□□ -2.43
GYPB-209ENST00000508618 GPX7Q96SL4 187 aaPredicted RBP-0.14□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms