RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 SMIM3Q9BZL3 60 aa6.44□□□□□ -1.38
NEDD9-211ENST00000508546 SLC25A22Q9H936 323 aa6.44□□□□□ -1.38
NEDD9-211ENST00000508546 PSENENQ9NZ42 101 aa6.44□□□□□ -1.38
NEDD9-211ENST00000508546 LRP1Q07954 4544 aaKnown RBP6.43□□□□□ -1.38
NEDD9-211ENST00000508546 BORCS7-ASMTA0A0B4J1R7 106 aa6.43□□□□□ -1.38
NEDD9-211ENST00000508546 A0A0J9YY99 117 aa6.43□□□□□ -1.38
NEDD9-211ENST00000508546 KRTAP29-1A8MX34 341 aaPredicted RBP6.43□□□□□ -1.38
NEDD9-211ENST00000508546 SMR3BP02814 79 aaPredicted RBP6.43□□□□□ -1.38
NEDD9-211ENST00000508546 HTN1P15515 57 aa6.43□□□□□ -1.38
NEDD9-211ENST00000508546 HOXA5P20719 270 aa6.43□□□□□ -1.38
NEDD9-211ENST00000508546 S100A7P31151 101 aa6.43□□□□□ -1.38
NEDD9-211ENST00000508546 SULT1A1P50225 295 aa6.43□□□□□ -1.38
NEDD9-211ENST00000508546 NHLH2Q02577 135 aa6.43□□□□□ -1.38
NEDD9-211ENST00000508546 IGFL4Q6B9Z1 124 aa6.43□□□□□ -1.38
NEDD9-211ENST00000508546 RPL7L1Q6DKI1 246 aaKnown RBP6.43□□□□□ -1.38
NEDD9-211ENST00000508546 ALKAL2Q6UX46 152 aa6.43□□□□□ -1.38
NEDD9-211ENST00000508546 Q6ZSN1 163 aa6.43□□□□□ -1.38
NEDD9-211ENST00000508546 RNF182Q8N6D2 247 aa6.43□□□□□ -1.38
NEDD9-211ENST00000508546 OR8A1Q8NGG7 326 aa6.43□□□□□ -1.38
NEDD9-211ENST00000508546 PHYHIPLQ96FC7 376 aa6.43□□□□□ -1.38
NEDD9-211ENST00000508546 C20orf144Q9BQM9 153 aa6.43□□□□□ -1.38
NEDD9-211ENST00000508546 CYTL1Q9NRR1 136 aa6.43□□□□□ -1.38
NEDD9-211ENST00000508546 H7BYZ3 331 aa6.42□□□□□ -1.38
NEDD9-211ENST00000508546 SIVA1O15304 175 aa6.42□□□□□ -1.38
NEDD9-211ENST00000508546 CST7O76096 145 aa6.42□□□□□ -1.38
NEDD9-211ENST00000508546 CDKN1BP46527 198 aa6.42□□□□□ -1.38
NEDD9-211ENST00000508546 RHOBP62745 196 aa6.42□□□□□ -1.38
NEDD9-211ENST00000508546 HBG1P69891 147 aa6.42□□□□□ -1.38
NEDD9-211ENST00000508546 HBG2P69892 147 aa6.42□□□□□ -1.38
NEDD9-211ENST00000508546 ZNF266Q14584 549 aa6.42□□□□□ -1.38
NEDD9-211ENST00000508546 SPANXN5Q5MJ07 72 aa6.42□□□□□ -1.38
NEDD9-211ENST00000508546 ZNF738Q8NE65 137 aa6.42□□□□□ -1.38
NEDD9-211ENST00000508546 OR5C1Q8NGR4 320 aa6.42□□□□□ -1.38
NEDD9-211ENST00000508546 STRAPQ9Y3F4 350 aaKnown RBP6.42□□□□□ -1.38
NEDD9-211ENST00000508546 A0A087WTM6 91 aa6.41□□□□□ -1.38
NEDD9-211ENST00000508546 A0A096LPF7 62 aa6.41□□□□□ -1.38
NEDD9-211ENST00000508546 METTL15P1P0C7V9 234 aa6.41□□□□□ -1.38
NEDD9-211ENST00000508546 RAB14P61106 215 aa6.41□□□□□ -1.38
NEDD9-211ENST00000508546 RAB11AP62491 216 aa6.41□□□□□ -1.38
NEDD9-211ENST00000508546 RPP30P78346 268 aaKnown RBP6.41□□□□□ -1.38
NEDD9-211ENST00000508546 HIST1H1AQ02539 215 aaPredicted RBP6.41□□□□□ -1.38
NEDD9-211ENST00000508546 NDUFA5Q16718 116 aa6.41□□□□□ -1.38
NEDD9-211ENST00000508546 TMEM14EPQ6UXP3 125 aa6.41□□□□□ -1.38
NEDD9-211ENST00000508546 NFE4Q86UQ8 179 aa6.41□□□□□ -1.38
NEDD9-211ENST00000508546 BPIFCQ8NFQ6 507 aa6.41□□□□□ -1.38
NEDD9-211ENST00000508546 ATP5SQ99766 215 aa6.41□□□□□ -1.38
NEDD9-211ENST00000508546 WFDC1Q9HC57 220 aa6.41□□□□□ -1.38
NEDD9-211ENST00000508546 PPP1R14DQ9NXH3 145 aa6.41□□□□□ -1.38
NEDD9-211ENST00000508546 GAGE12BA1L429 117 aa6.4□□□□□ -1.38
NEDD9-211ENST00000508546 GAGE7O76087 117 aa6.4□□□□□ -1.38
NEDD9-211ENST00000508546 GAGE12FP0CL80 117 aa6.4□□□□□ -1.38
NEDD9-211ENST00000508546 GAGE12GP0CL81 117 aa6.4□□□□□ -1.38
NEDD9-211ENST00000508546 GAGE12IP0CL82 117 aa6.4□□□□□ -1.38
NEDD9-211ENST00000508546 DNAH10OSP0CZ25 163 aa6.4□□□□□ -1.38
NEDD9-211ENST00000508546 RPL7P18124 248 aaKnown RBP6.4□□□□□ -1.38
NEDD9-211ENST00000508546 ORM2P19652 201 aa6.4□□□□□ -1.38
NEDD9-211ENST00000508546 GCSHP23434 173 aa6.4□□□□□ -1.38
NEDD9-211ENST00000508546 SLC38A11Q08AI6 406 aa6.4□□□□□ -1.38
NEDD9-211ENST00000508546 PSG3Q16557 428 aa6.4□□□□□ -1.38
NEDD9-211ENST00000508546 CLLU1Q5K131 121 aa6.4□□□□□ -1.38
NEDD9-211ENST00000508546 FAM74A1Q5RGS3 127 aa6.4□□□□□ -1.38
NEDD9-211ENST00000508546 EIF5AL1Q6IS14 154 aaKnown RBP6.4□□□□□ -1.38
NEDD9-211ENST00000508546 CCDC28AQ8IWP9 274 aa6.4□□□□□ -1.38
NEDD9-211ENST00000508546 TMED6Q8WW62 240 aa6.4□□□□□ -1.38
NEDD9-211ENST00000508546 VSIG2Q96IQ7 327 aa6.4□□□□□ -1.38
NEDD9-211ENST00000508546 TMEM147Q9BVK8 224 aa6.4□□□□□ -1.38
NEDD9-211ENST00000508546 KRTAP9-2Q9BYQ4 174 aa6.4□□□□□ -1.38
NEDD9-211ENST00000508546 A0A087X0K7 114 aa6.39□□□□□ -1.39
NEDD9-211ENST00000508546 UBE2L5PA0A1B0GUS4 154 aa6.39□□□□□ -1.39
NEDD9-211ENST00000508546 SNURFLB1AK76 121 aa6.39□□□□□ -1.39
NEDD9-211ENST00000508546 H3BRN7 92 aa6.39□□□□□ -1.39
NEDD9-211ENST00000508546 LRP2P98164 4655 aa6.39□□□□□ -1.39
NEDD9-211ENST00000508546 DAZ2Q13117 558 aaKnown RBP6.39□□□□□ -1.39
NEDD9-211ENST00000508546 TMEM182Q6ZP80 229 aaPredicted RBP6.39□□□□□ -1.39
NEDD9-211ENST00000508546 HSD17B11Q8NBQ5 300 aa6.39□□□□□ -1.39
NEDD9-211ENST00000508546 OR10P1Q8NGE3 313 aa6.39□□□□□ -1.39
NEDD9-211ENST00000508546 PCNPQ8WW12 178 aaKnown RBP6.39□□□□□ -1.39
NEDD9-211ENST00000508546 SHANK2-AS3Q9BTD1 123 aa6.39□□□□□ -1.39
NEDD9-211ENST00000508546 TMEM70Q9BUB7 260 aa6.39□□□□□ -1.39
NEDD9-211ENST00000508546 ARV1Q9H2C2 271 aa6.39□□□□□ -1.39
NEDD9-211ENST00000508546 TMPRSS5Q9H3S3 457 aa6.39□□□□□ -1.39
NEDD9-211ENST00000508546 TNFRSF18Q9Y5U5 241 aa6.39□□□□□ -1.39
NEDD9-211ENST00000508546 PKHD1L1Q86WI1 4243 aa6.39□□□□□ -1.39
NEDD9-211ENST00000508546 PMS2P5A8MQ11 134 aa6.38□□□□□ -1.39
NEDD9-211ENST00000508546 PRSS46E5RG02 174 aa6.38□□□□□ -1.39
NEDD9-211ENST00000508546 ATP6V1G1O75348 118 aa6.38□□□□□ -1.39
NEDD9-211ENST00000508546 NXPH4O95158 308 aa6.38□□□□□ -1.39
NEDD9-211ENST00000508546 NMBP08949 121 aa6.38□□□□□ -1.39
NEDD9-211ENST00000508546 SEC11BP0C7V7 166 aa6.38□□□□□ -1.39
NEDD9-211ENST00000508546 GATA2P23769 480 aaPredicted RBP6.38□□□□□ -1.39
NEDD9-211ENST00000508546 HAMPP81172 84 aa6.38□□□□□ -1.39
NEDD9-211ENST00000508546 ARL16Q0P5N6 197 aa6.38□□□□□ -1.39
NEDD9-211ENST00000508546 ATP6V1FQ16864 119 aa6.38□□□□□ -1.39
NEDD9-211ENST00000508546 LRRC20Q8TCA0 184 aa6.38□□□□□ -1.39
NEDD9-211ENST00000508546 PARD6GQ9BYG4 376 aaPredicted RBP6.38□□□□□ -1.39
NEDD9-211ENST00000508546 SH3BGRL3Q9H299 93 aa6.38□□□□□ -1.39
NEDD9-211ENST00000508546 FAT3Q8TDW7 4589 aa6.37□□□□□ -1.39
NEDD9-211ENST00000508546 TRAV9-2A0A087WT02 112 aa6.37□□□□□ -1.39
NEDD9-211ENST00000508546 KRTAP9-6A0A140TA67 174 aa6.37□□□□□ -1.39
NEDD9-211ENST00000508546 K7EP13 123 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms