RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 INO80EQ8NBZ0 244 aaPredicted RBP17.12■□□□□ 0.33
SRPK1-210ENST00000508473 OR10G4Q8NGN3 311 aa17.12■□□□□ 0.33
SRPK1-210ENST00000508473 OR10G9Q8NGN4 311 aa17.12■□□□□ 0.33
SRPK1-210ENST00000508473 OR10G7Q8NGN6 311 aa17.12■□□□□ 0.33
SRPK1-210ENST00000508473 Q9H3A6 140 aa17.12■□□□□ 0.33
SRPK1-210ENST00000508473 HMGB3O15347 200 aaKnown RBP17.11■□□□□ 0.33
SRPK1-210ENST00000508473 C9orf47Q6ZRZ4 202 aa17.11■□□□□ 0.33
SRPK1-210ENST00000508473 RNASE8Q8TDE3 154 aaKnown RBP17.11■□□□□ 0.33
SRPK1-210ENST00000508473 C7orf71A4D174 169 aa17.1■□□□□ 0.33
SRPK1-210ENST00000508473 RNF222A6NCQ9 220 aa17.1■□□□□ 0.33
SRPK1-210ENST00000508473 SLC25A5P05141 298 aaKnown RBP17.1■□□□□ 0.33
SRPK1-210ENST00000508473 ATP6V0CP27449 155 aa17.1■□□□□ 0.33
SRPK1-210ENST00000508473 BTN1A1Q13410 526 aa17.1■□□□□ 0.33
SRPK1-210ENST00000508473 TMEM78Q5T7P6 136 aa17.1■□□□□ 0.33
SRPK1-210ENST00000508473 ZNF493Q6ZR52 646 aa17.1■□□□□ 0.33
SRPK1-210ENST00000508473 CCDC28AQ8IWP9 274 aa17.1■□□□□ 0.33
SRPK1-210ENST00000508473 TMEM263Q8WUH6 116 aaKnown RBP17.1■□□□□ 0.33
SRPK1-210ENST00000508473 FAM19A4Q96LR4 140 aa17.1■□□□□ 0.33
SRPK1-210ENST00000508473 RNASE4P34096 147 aaKnown RBP17.09■□□□□ 0.33
SRPK1-210ENST00000508473 CSN1S1P47710 185 aa17.09■□□□□ 0.33
SRPK1-210ENST00000508473 CD300CQ08708 224 aa17.09■□□□□ 0.33
SRPK1-210ENST00000508473 NOP10Q9NPE3 64 aaKnown RBP17.09■□□□□ 0.33
SRPK1-210ENST00000508473 TNFSF18Q9UNG2 199 aa17.09■□□□□ 0.33
SRPK1-210ENST00000508473 TIMM8BQ9Y5J9 83 aaPredicted RBP17.09■□□□□ 0.33
SRPK1-210ENST00000508473 VPS13DQ5THJ4 4388 aa17.08■□□□□ 0.33
SRPK1-210ENST00000508473 KMT2AQ03164 3969 aa17.08■□□□□ 0.32
SRPK1-210ENST00000508473 KLLNB2CW77 178 aa17.08■□□□□ 0.32
SRPK1-210ENST00000508473 LYPD1Q8N2G4 141 aa17.08■□□□□ 0.32
SRPK1-210ENST00000508473 HYLS1Q96M11 299 aa17.08■□□□□ 0.32
SRPK1-210ENST00000508473 SH3BGRL3Q9H299 93 aa17.08■□□□□ 0.32
SRPK1-210ENST00000508473 GPX1P07203 203 aa17.07■□□□□ 0.32
SRPK1-210ENST00000508473 RPL7L1Q6DKI1 246 aaKnown RBP17.07■□□□□ 0.32
SRPK1-210ENST00000508473 PQLC2Q6ZP29 291 aa17.07■□□□□ 0.32
SRPK1-210ENST00000508473 OR2G3Q8NGZ4 309 aa17.07■□□□□ 0.32
SRPK1-210ENST00000508473 Q8TAT8 98 aa17.07■□□□□ 0.32
SRPK1-210ENST00000508473 PSMG3Q9BT73 122 aaPredicted RBP17.07■□□□□ 0.32
SRPK1-210ENST00000508473 ZNF492Q9P255 531 aa17.07■□□□□ 0.32
SRPK1-210ENST00000508473 G3V3Q6 166 aa17.06■□□□□ 0.32
SRPK1-210ENST00000508473 CRISP2P16562 243 aa17.06■□□□□ 0.32
SRPK1-210ENST00000508473 CDC34P49427 236 aaPredicted RBP17.06■□□□□ 0.32
SRPK1-210ENST00000508473 TMEM88Q6PEY1 159 aa17.06■□□□□ 0.32
SRPK1-210ENST00000508473 ZFAND2AQ8N6M9 145 aa17.06■□□□□ 0.32
SRPK1-210ENST00000508473 FAM210BQ96KR6 192 aa17.06■□□□□ 0.32
SRPK1-210ENST00000508473 PYGO2Q9BRQ0 406 aa17.06■□□□□ 0.32
SRPK1-210ENST00000508473 PGPA6NDG6 321 aa17.05■□□□□ 0.32
SRPK1-210ENST00000508473 ZNF138P52744 262 aa17.05■□□□□ 0.32
SRPK1-210ENST00000508473 PRR9Q5T870 116 aa17.05■□□□□ 0.32
SRPK1-210ENST00000508473 OTORQ9NRC9 128 aa17.05■□□□□ 0.32
SRPK1-210ENST00000508473 RPH3ALQ9UNE2 315 aa17.05■□□□□ 0.32
SRPK1-210ENST00000508473 SMLR1H3BR10 107 aa17.04■□□□□ 0.32
SRPK1-210ENST00000508473 ZNF324O75467 553 aaPredicted RBP17.04■□□□□ 0.32
SRPK1-210ENST00000508473 ARL14EPLP0DKL9 152 aa17.04■□□□□ 0.32
SRPK1-210ENST00000508473 EPPK1P58107 5090 aaKnown RBP17.03■□□□□ 0.32
SRPK1-210ENST00000508473 BORCS7-ASMTA0A0B4J1R7 106 aa17.03■□□□□ 0.32
SRPK1-210ENST00000508473 SNURFLB1AK76 121 aa17.03■□□□□ 0.32
SRPK1-210ENST00000508473 DIRC3C9JPN6 131 aa17.03■□□□□ 0.32
SRPK1-210ENST00000508473 F5H768 121 aa17.03■□□□□ 0.32
SRPK1-210ENST00000508473 Q6ZQT7 251 aa17.03■□□□□ 0.32
SRPK1-210ENST00000508473 CMTM2Q8TAZ6 248 aa17.03■□□□□ 0.32
SRPK1-210ENST00000508473 RXFP4Q8TDU9 374 aa17.03■□□□□ 0.32
SRPK1-210ENST00000508473 RAB24Q969Q5 203 aa17.03■□□□□ 0.32
SRPK1-210ENST00000508473 RBAKDNA6NC62 111 aa17.02■□□□□ 0.32
SRPK1-210ENST00000508473 CBY3A6NI87 242 aa17.02■□□□□ 0.32
SRPK1-210ENST00000508473 ARPC5O15511 151 aa17.02■□□□□ 0.32
SRPK1-210ENST00000508473 MBP02144 154 aa17.02■□□□□ 0.32
SRPK1-210ENST00000508473 NMBP08949 121 aa17.02■□□□□ 0.32
SRPK1-210ENST00000508473 SERF2P84101 59 aa17.02■□□□□ 0.32
SRPK1-210ENST00000508473 ATP5G1P05496 136 aa17.01■□□□□ 0.31
SRPK1-210ENST00000508473 STAG3L2P0CL84 134 aa17.01■□□□□ 0.31
SRPK1-210ENST00000508473 STAG3L3P0CL85 134 aa17.01■□□□□ 0.31
SRPK1-210ENST00000508473 P0DMU3 169 aa17.01■□□□□ 0.31
SRPK1-210ENST00000508473 FAM231AP0DMU4 169 aa17.01■□□□□ 0.31
SRPK1-210ENST00000508473 FAM231CP0DMU5 169 aa17.01■□□□□ 0.31
SRPK1-210ENST00000508473 ATP5G3P48201 142 aa17.01■□□□□ 0.31
SRPK1-210ENST00000508473 FAM74A1Q5RGS3 127 aa17.01■□□□□ 0.31
SRPK1-210ENST00000508473 GNPNAT1Q96EK6 184 aaPredicted RBP17.01■□□□□ 0.31
SRPK1-210ENST00000508473 GAGE12BA1L429 117 aa17■□□□□ 0.31
SRPK1-210ENST00000508473 GAGE7O76087 117 aa17■□□□□ 0.31
SRPK1-210ENST00000508473 GAGE12FP0CL80 117 aa17■□□□□ 0.31
SRPK1-210ENST00000508473 GAGE12GP0CL81 117 aa17■□□□□ 0.31
SRPK1-210ENST00000508473 GAGE12IP0CL82 117 aa17■□□□□ 0.31
SRPK1-210ENST00000508473 EIF4E3Q8N5X7 224 aaKnown RBP17■□□□□ 0.31
SRPK1-210ENST00000508473 GSN-AS1Q9NRJ2 163 aa17■□□□□ 0.31
SRPK1-210ENST00000508473 RGS13O14921 159 aa16.99■□□□□ 0.31
SRPK1-210ENST00000508473 GCHFRP30047 84 aa16.99■□□□□ 0.31
SRPK1-210ENST00000508473 GNG5P63218 68 aa16.99■□□□□ 0.31
SRPK1-210ENST00000508473 GOLT1AQ6ZVE7 132 aa16.99■□□□□ 0.31
SRPK1-210ENST00000508473 POM121L12Q8N7R1 296 aa16.99■□□□□ 0.31
SRPK1-210ENST00000508473 ACTR3CQ9C0K3 210 aaPredicted RBP16.99■□□□□ 0.31
SRPK1-210ENST00000508473 SSX7Q7RTT5 188 aa16.98■□□□□ 0.31
SRPK1-210ENST00000508473 LINC00612Q8N6U2 182 aa16.98■□□□□ 0.31
SRPK1-210ENST00000508473 C11orf72Q8NBR9 251 aa16.98■□□□□ 0.31
SRPK1-210ENST00000508473 LINC00467Q9BRT7 94 aa16.98■□□□□ 0.31
SRPK1-210ENST00000508473 TP53TG3Q9ULZ0 132 aa16.98■□□□□ 0.31
SRPK1-210ENST00000508473 TRBV7-9A0A0J9YWB2 115 aa16.97■□□□□ 0.31
SRPK1-210ENST00000508473 ANXA2RQ3ZCQ2 193 aa16.97■□□□□ 0.31
SRPK1-210ENST00000508473 UBE2DNLQ8IWF7 75 aa16.97■□□□□ 0.31
SRPK1-210ENST00000508473 ZNF680Q8NEM1 530 aa16.97■□□□□ 0.31
SRPK1-210ENST00000508473 IGHV1OR15-1A0A075B7D0 117 aa16.96■□□□□ 0.31
SRPK1-210ENST00000508473 DAZ2Q13117 558 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 150.8 ms