RNA–Protein interactions for RNA: ENST00000503621.5

CLDND1-209, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-209ENST00000503621 FXYD7P58549 80 aa12.39□□□□□ -0.43
CLDND1-209ENST00000503621 AKR1C8PQ5T2L2 129 aa12.39□□□□□ -0.43
CLDND1-209ENST00000503621 HYLS1Q96M11 299 aa12.39□□□□□ -0.43
CLDND1-209ENST00000503621 KLK5Q9Y337 293 aaPredicted RBP12.39□□□□□ -0.43
CLDND1-209ENST00000503621 ARL2-SNX15V9GYD0 113 aa12.39□□□□□ -0.43
CLDND1-209ENST00000503621 KANTRA0A1W2PQU2 76 aa12.38□□□□□ -0.43
CLDND1-209ENST00000503621 A0A1W2PRE2 83 aa12.38□□□□□ -0.43
CLDND1-209ENST00000503621 CXorf65A6NEN9 183 aa12.38□□□□□ -0.43
CLDND1-209ENST00000503621 FBLL1A6NHQ2 334 aaKnown RBP12.38□□□□□ -0.43
CLDND1-209ENST00000503621 DIRC3C9JPN6 131 aa12.38□□□□□ -0.43
CLDND1-209ENST00000503621 SMLR1H3BR10 107 aa12.38□□□□□ -0.43
CLDND1-209ENST00000503621 SPART-AS1P0CW21 52 aa12.38□□□□□ -0.43
CLDND1-209ENST00000503621 TMEM78Q5T7P6 136 aa12.38□□□□□ -0.43
CLDND1-209ENST00000503621 DPPA3Q6W0C5 159 aa12.38□□□□□ -0.43
CLDND1-209ENST00000503621 PHLDA1Q8WV24 401 aaPredicted RBP12.38□□□□□ -0.43
CLDND1-209ENST00000503621 PYGO2Q9BRQ0 406 aa12.38□□□□□ -0.43
CLDND1-209ENST00000503621 TMEM208Q9BTX3 173 aa12.38□□□□□ -0.43
CLDND1-209ENST00000503621 LYRM9A8MSI8 78 aa12.37□□□□□ -0.43
CLDND1-209ENST00000503621 ZNF138P52744 262 aa12.37□□□□□ -0.43
CLDND1-209ENST00000503621 LGALSLQ3ZCW2 172 aaPredicted RBP12.37□□□□□ -0.43
CLDND1-209ENST00000503621 BAP18Q8IXM2 172 aa12.37□□□□□ -0.43
CLDND1-209ENST00000503621 DKK2Q9UBU2 259 aa12.37□□□□□ -0.43
CLDND1-209ENST00000503621 STARD9Q9P2P6 4700 aa12.37□□□□□ -0.43
CLDND1-209ENST00000503621 LOC102723971A0A1B0GUV8 181 aa12.36□□□□□ -0.43
CLDND1-209ENST00000503621 PGPA6NDG6 321 aa12.36□□□□□ -0.43
CLDND1-209ENST00000503621 ZNF324O75467 553 aaPredicted RBP12.36□□□□□ -0.43
CLDND1-209ENST00000503621 ZNF726P1Q15940 193 aa12.36□□□□□ -0.43
CLDND1-209ENST00000503621 GFI1BQ5VTD9 330 aa12.36□□□□□ -0.43
CLDND1-209ENST00000503621 ZFAND2AQ8N6M9 145 aa12.36□□□□□ -0.43
CLDND1-209ENST00000503621 C5orf17Q8NAS9 161 aa12.36□□□□□ -0.43
CLDND1-209ENST00000503621 TMEM263Q8WUH6 116 aaKnown RBP12.36□□□□□ -0.43
CLDND1-209ENST00000503621 C16orf74Q96GX8 76 aa12.36□□□□□ -0.43
CLDND1-209ENST00000503621 FAM210BQ96KR6 192 aa12.36□□□□□ -0.43
CLDND1-209ENST00000503621 TCEAL7Q9BRU2 100 aa12.36□□□□□ -0.43
CLDND1-209ENST00000503621 TRAV12-2A0A075B6T6 113 aa12.35□□□□□ -0.43
CLDND1-209ENST00000503621 C7orf71A4D174 169 aa12.35□□□□□ -0.43
CLDND1-209ENST00000503621 ZFAND6Q6FIF0 208 aa12.35□□□□□ -0.43
CLDND1-209ENST00000503621 TMUB2Q71RG4 321 aa12.35□□□□□ -0.43
CLDND1-209ENST00000503621 CMTM2Q8TAZ6 248 aa12.35□□□□□ -0.43
CLDND1-209ENST00000503621 RNASE8Q8TDE3 154 aaKnown RBP12.35□□□□□ -0.43
CLDND1-209ENST00000503621 NIPSNAP3BQ9BS92 247 aa12.35□□□□□ -0.43
CLDND1-209ENST00000503621 KMT2CQ8NEZ4 4911 aaKnown RBP12.35□□□□□ -0.43
CLDND1-209ENST00000503621 TRAV10A0A0B4J240 114 aa12.34□□□□□ -0.43
CLDND1-209ENST00000503621 LCE6AA0A183 80 aa12.34□□□□□ -0.43
CLDND1-209ENST00000503621 PLAC8L1A1L4L8 177 aa12.34□□□□□ -0.43
CLDND1-209ENST00000503621 DEFB4AO15263 64 aa12.34□□□□□ -0.43
CLDND1-209ENST00000503621 TPT1P13693 172 aaKnown RBP12.34□□□□□ -0.43
CLDND1-209ENST00000503621 FHITP49789 147 aa12.34□□□□□ -0.43
CLDND1-209ENST00000503621 RAB5CP51148 216 aa12.34□□□□□ -0.43
CLDND1-209ENST00000503621 NANOS2P60321 138 aaKnown RBP12.34□□□□□ -0.43
CLDND1-209ENST00000503621 C12orf74Q32Q52 190 aa12.34□□□□□ -0.43
CLDND1-209ENST00000503621 ANXA2RQ3ZCQ2 193 aa12.34□□□□□ -0.43
CLDND1-209ENST00000503621 EIF5AL1Q6IS14 154 aaKnown RBP12.34□□□□□ -0.43
CLDND1-209ENST00000503621 MBD3L1Q8WWY6 194 aa12.34□□□□□ -0.43
CLDND1-209ENST00000503621 LINC01587Q99440 93 aa12.34□□□□□ -0.43
CLDND1-209ENST00000503621 VGLL1Q99990 258 aa12.34□□□□□ -0.43
CLDND1-209ENST00000503621 TP53TG3Q9ULZ0 132 aa12.34□□□□□ -0.43
CLDND1-209ENST00000503621 IGHV3OR16-12A0A075B7B8 117 aa12.33□□□□□ -0.44
CLDND1-209ENST00000503621 IGKV2-40A0A087WW87 121 aaPredicted RBP12.33□□□□□ -0.44
CLDND1-209ENST00000503621 IGKV2D-40P01614 121 aaPredicted RBP12.33□□□□□ -0.44
CLDND1-209ENST00000503621 ERCC8Q13216 396 aa12.33□□□□□ -0.44
CLDND1-209ENST00000503621 Q6AWC8 147 aa12.33□□□□□ -0.44
CLDND1-209ENST00000503621 AKAP14Q86UN6 197 aa12.33□□□□□ -0.44
CLDND1-209ENST00000503621 ZNF471Q9BX82 626 aaPredicted RBP12.33□□□□□ -0.44
CLDND1-209ENST00000503621 CELA1Q9UNI1 258 aa12.33□□□□□ -0.44
CLDND1-209ENST00000503621 K7EQM0 130 aa12.32□□□□□ -0.44
CLDND1-209ENST00000503621 FAM222AQ5U5X8 452 aa12.32□□□□□ -0.44
CLDND1-209ENST00000503621 SSX7Q7RTT5 188 aa12.32□□□□□ -0.44
CLDND1-209ENST00000503621 C2CD4CQ8TF44 421 aa12.32□□□□□ -0.44
CLDND1-209ENST00000503621 YTHDF2Q9Y5A9 579 aaKnown RBP12.32□□□□□ -0.44
CLDND1-209ENST00000503621 TIMM8BQ9Y5J9 83 aaPredicted RBP12.32□□□□□ -0.44
CLDND1-209ENST00000503621 LYSTQ99698 3801 aa12.32□□□□□ -0.44
CLDND1-209ENST00000503621 TCRAP04437 139 aa12.31□□□□□ -0.44
CLDND1-209ENST00000503621 GPX1P07203 203 aa12.31□□□□□ -0.44
CLDND1-209ENST00000503621 DAZ2Q13117 558 aaKnown RBP12.31□□□□□ -0.44
CLDND1-209ENST00000503621 IBA57Q5T440 356 aaKnown RBP12.31□□□□□ -0.44
CLDND1-209ENST00000503621 CCDC28AQ8IWP9 274 aa12.31□□□□□ -0.44
CLDND1-209ENST00000503621 LINC00612Q8N6U2 182 aa12.31□□□□□ -0.44
CLDND1-209ENST00000503621 ZNF680Q8NEM1 530 aa12.31□□□□□ -0.44
CLDND1-209ENST00000503621 C18orf15Q96N68 181 aa12.31□□□□□ -0.44
CLDND1-209ENST00000503621 TRAV1-1A0A0B4J248 108 aa12.3□□□□□ -0.44
CLDND1-209ENST00000503621 MAP1LC3B2A6NCE7 125 aa12.3□□□□□ -0.44
CLDND1-209ENST00000503621 ZNF705GA8MUZ8 300 aaPredicted RBP12.3□□□□□ -0.44
CLDND1-209ENST00000503621 GGTLC3B5MD39 225 aa12.3□□□□□ -0.44
CLDND1-209ENST00000503621 HMGB3O15347 200 aaKnown RBP12.3□□□□□ -0.44
CLDND1-209ENST00000503621 PFDN1O60925 122 aa12.3□□□□□ -0.44
CLDND1-209ENST00000503621 KIR3DS1Q14943 382 aa12.3□□□□□ -0.44
CLDND1-209ENST00000503621 TDRG1Q3Y452 100 aa12.3□□□□□ -0.44
CLDND1-209ENST00000503621 Q6ZTC4 211 aa12.3□□□□□ -0.44
CLDND1-209ENST00000503621 SLC51BQ86UW2 128 aa12.3□□□□□ -0.44
CLDND1-209ENST00000503621 TMEM75Q8N9X5 138 aa12.3□□□□□ -0.44
CLDND1-209ENST00000503621 HIST1H2BAQ96A08 127 aa12.3□□□□□ -0.44
CLDND1-209ENST00000503621 ATG101Q9BSB4 218 aa12.3□□□□□ -0.44
CLDND1-209ENST00000503621 MAP1LC3BQ9GZQ8 125 aa12.3□□□□□ -0.44
CLDND1-209ENST00000503621 EPDR1Q9UM22 224 aa12.3□□□□□ -0.44
CLDND1-209ENST00000503621 AZU1P20160 251 aa12.29□□□□□ -0.44
CLDND1-209ENST00000503621 PPT1P50897 306 aa12.29□□□□□ -0.44
CLDND1-209ENST00000503621 SUMO1P63165 101 aaKnown RBP12.29□□□□□ -0.44
CLDND1-209ENST00000503621 PMS2P11Q13670 270 aa12.29□□□□□ -0.44
CLDND1-209ENST00000503621 TRAV12-3A0A0B4J271 114 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms