RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 ANKRD39Q53RE8 183 aa13.75□□□□□ -0.21
HMGXB3-201ENST00000502717 SRD5A1P18405 259 aa13.75□□□□□ -0.21
HMGXB3-201ENST00000502717 C15orf32Q32M92 178 aa13.75□□□□□ -0.21
HMGXB3-201ENST00000502717 C2orf70A6NJV1 201 aa13.75□□□□□ -0.21
HMGXB3-201ENST00000502717 IGFL4Q6B9Z1 124 aa13.75□□□□□ -0.21
HMGXB3-201ENST00000502717 LINC00311Q8N616 119 aa13.75□□□□□ -0.21
HMGXB3-201ENST00000502717 Q8TCH9 128 aa13.75□□□□□ -0.21
HMGXB3-201ENST00000502717 KMT2EQ8IZD2 1858 aa13.74□□□□□ -0.21
HMGXB3-201ENST00000502717 MBD3L4A6NDZ8 208 aaPredicted RBP13.74□□□□□ -0.21
HMGXB3-201ENST00000502717 MBD3L3A6NE82 208 aaPredicted RBP13.74□□□□□ -0.21
HMGXB3-201ENST00000502717 MBD3L5A6NJ08 208 aaPredicted RBP13.74□□□□□ -0.21
HMGXB3-201ENST00000502717 H3BRN7 92 aa13.74□□□□□ -0.21
HMGXB3-201ENST00000502717 P0C879 139 aa13.74□□□□□ -0.21
HMGXB3-201ENST00000502717 FAM120AOSQ5T036 256 aa13.74□□□□□ -0.21
HMGXB3-201ENST00000502717 MBD3L2Q8NHZ7 208 aaPredicted RBP13.74□□□□□ -0.21
HMGXB3-201ENST00000502717 LINC00477Q96M19 166 aa13.74□□□□□ -0.21
HMGXB3-201ENST00000502717 USF3Q68DE3 2245 aa13.74□□□□□ -0.21
HMGXB3-201ENST00000502717 C9orf139Q6ZV77 190 aa13.74□□□□□ -0.21
HMGXB3-201ENST00000502717 GLMPQ8WWB7 406 aa13.74□□□□□ -0.21
HMGXB3-201ENST00000502717 SRCAPQ6ZRS2 3230 aa13.74□□□□□ -0.21
HMGXB3-201ENST00000502717 YLPM1P49750 1951 aaKnown RBP13.74□□□□□ -0.21
HMGXB3-201ENST00000502717 CTRLP40313 264 aa13.74□□□□□ -0.21
HMGXB3-201ENST00000502717 RBX1P62877 108 aa13.73□□□□□ -0.21
HMGXB3-201ENST00000502717 OR11H6Q8NGC7 330 aa13.73□□□□□ -0.21
HMGXB3-201ENST00000502717 DPH3Q96FX2 82 aa13.73□□□□□ -0.21
HMGXB3-201ENST00000502717 PEMTQ9UBM1 199 aa13.73□□□□□ -0.21
HMGXB3-201ENST00000502717 G3V4G9 280 aa13.73□□□□□ -0.21
HMGXB3-201ENST00000502717 NDUFB8O95169 186 aa13.73□□□□□ -0.21
HMGXB3-201ENST00000502717 C14orf178Q8N769 122 aaPredicted RBP13.73□□□□□ -0.21
HMGXB3-201ENST00000502717 PLA2G2CQ5R387 149 aa13.73□□□□□ -0.21
HMGXB3-201ENST00000502717 ARHGAP21Q5T5U3 1957 aa13.73□□□□□ -0.21
HMGXB3-201ENST00000502717 PKDREJQ9NTG1 2253 aa13.73□□□□□ -0.21
HMGXB3-201ENST00000502717 AMTNQ6UX39 209 aa13.73□□□□□ -0.21
HMGXB3-201ENST00000502717 FAM167A-AS1Q96KT0 104 aa13.73□□□□□ -0.21
HMGXB3-201ENST00000502717 OOSP1A8MZH6 123 aa13.72□□□□□ -0.21
HMGXB3-201ENST00000502717 F8VRH5 84 aa13.72□□□□□ -0.21
HMGXB3-201ENST00000502717 PAX8Q06710 450 aa13.72□□□□□ -0.21
HMGXB3-201ENST00000502717 C2orf16Q68DN1 1984 aa13.72□□□□□ -0.21
HMGXB3-201ENST00000502717 SHISA9B4DS77 424 aa13.72□□□□□ -0.21
HMGXB3-201ENST00000502717 LYNX1G3V0Z9 82 aa13.72□□□□□ -0.21
HMGXB3-201ENST00000502717 LYNX1P0DP58 116 aa13.72□□□□□ -0.21
HMGXB3-201ENST00000502717 LYPD2Q6UXB3 125 aa13.72□□□□□ -0.21
HMGXB3-201ENST00000502717 CD28P10747 220 aa13.72□□□□□ -0.21
HMGXB3-201ENST00000502717 ERCC8Q13216 396 aa13.71□□□□□ -0.21
HMGXB3-201ENST00000502717 C2orf66Q6UXQ4 117 aa13.71□□□□□ -0.21
HMGXB3-201ENST00000502717 TP53TG3Q9ULZ0 132 aa13.71□□□□□ -0.21
HMGXB3-201ENST00000502717 DOCK10Q96BY6 2186 aa13.71□□□□□ -0.21
HMGXB3-201ENST00000502717 A0A1W2PRX2 142 aa13.71□□□□□ -0.21
HMGXB3-201ENST00000502717 IGHV3-64A0A075B6Q5 118 aa13.71□□□□□ -0.21
HMGXB3-201ENST00000502717 IGLV1-44P01699 117 aa13.71□□□□□ -0.21
HMGXB3-201ENST00000502717 HLA-DRB4P13762 266 aa13.71□□□□□ -0.22
HMGXB3-201ENST00000502717 HLA-DRB4X5D2U9 266 aa13.71□□□□□ -0.22
HMGXB3-201ENST00000502717 NOTCH3Q9UM47 2321 aa13.7□□□□□ -0.22
HMGXB3-201ENST00000502717 DUX4L9Q6RFH8 374 aaPredicted RBP13.7□□□□□ -0.22
HMGXB3-201ENST00000502717 MORN5Q5VZ52 161 aa13.7□□□□□ -0.22
HMGXB3-201ENST00000502717 BOD1L2Q8IYS8 172 aa13.7□□□□□ -0.22
HMGXB3-201ENST00000502717 TRAV12-3A0A0B4J271 114 aa13.7□□□□□ -0.22
HMGXB3-201ENST00000502717 TRBV25-1A0A075B6N4 114 aa13.7□□□□□ -0.22
HMGXB3-201ENST00000502717 ZNF474Q6S9Z5 364 aaPredicted RBP13.7□□□□□ -0.22
HMGXB3-201ENST00000502717 IGLL5B9A064 214 aa13.69□□□□□ -0.22
HMGXB3-201ENST00000502717 C3orf36Q3SXR2 165 aa13.69□□□□□ -0.22
HMGXB3-201ENST00000502717 PATE2Q6UY27 113 aa13.69□□□□□ -0.22
HMGXB3-201ENST00000502717 GTSF1Q8WW33 167 aa13.69□□□□□ -0.22
HMGXB3-201ENST00000502717 A0A087WX48 190 aa13.69□□□□□ -0.22
HMGXB3-201ENST00000502717 CNTFRP26992 372 aa13.69□□□□□ -0.22
HMGXB3-201ENST00000502717 SRSF6Q13247 344 aaKnown RBP13.69□□□□□ -0.22
HMGXB3-201ENST00000502717 FOXI2Q6ZQN5 318 aa13.69□□□□□ -0.22
HMGXB3-201ENST00000502717 OR13C6PQ8NH95 151 aa13.69□□□□□ -0.22
HMGXB3-201ENST00000502717 PRADC1Q9BSG0 188 aa13.69□□□□□ -0.22
HMGXB3-201ENST00000502717 DTX2Q86UW9 622 aa13.69□□□□□ -0.22
HMGXB3-201ENST00000502717 TEX36Q5VZQ5 186 aa13.69□□□□□ -0.22
HMGXB3-201ENST00000502717 HIGD1BQ9P298 99 aa13.69□□□□□ -0.22
HMGXB3-201ENST00000502717 TPSG1Q9NRR2 321 aa13.68□□□□□ -0.22
HMGXB3-201ENST00000502717 ZNF688P0C7X2 276 aa13.68□□□□□ -0.22
HMGXB3-201ENST00000502717 PCNX2A6NKB5 2137 aa13.68□□□□□ -0.22
HMGXB3-201ENST00000502717 GP9P14770 177 aa13.67□□□□□ -0.22
HMGXB3-201ENST00000502717 MINOS1Q5TGZ0 78 aa13.67□□□□□ -0.22
HMGXB3-201ENST00000502717 MINOS1-NBL1R4GNA1 71 aa13.67□□□□□ -0.22
HMGXB3-201ENST00000502717 ZNF672Q499Z4 452 aaPredicted RBP13.67□□□□□ -0.22
HMGXB3-201ENST00000502717 MOB4Q9Y3A3 225 aa13.67□□□□□ -0.22
HMGXB3-201ENST00000502717 IGHV3-11P01762 117 aa13.67□□□□□ -0.22
HMGXB3-201ENST00000502717 TRBV7-1A0A0A6YYK4 115 aa13.66□□□□□ -0.22
HMGXB3-201ENST00000502717 SPATA12Q7Z6I5 190 aa13.66□□□□□ -0.22
HMGXB3-201ENST00000502717 SMIM2Q9BVW6 85 aa13.66□□□□□ -0.22
HMGXB3-201ENST00000502717 TRBV7-9A0A0J9YWB2 115 aa13.66□□□□□ -0.22
HMGXB3-201ENST00000502717 SH2D6Q7Z4S9 175 aa13.66□□□□□ -0.22
HMGXB3-201ENST00000502717 TMEM101Q96IK0 257 aa13.66□□□□□ -0.22
HMGXB3-201ENST00000502717 TMEM141Q96I45 108 aa13.66□□□□□ -0.22
HMGXB3-201ENST00000502717 C1QTNF4Q9BXJ3 329 aa13.66□□□□□ -0.22
HMGXB3-201ENST00000502717 PRO1854Q9UHT4 67 aa13.66□□□□□ -0.22
HMGXB3-201ENST00000502717 IGKV1OR2-108A0A075B7D4 117 aa13.66□□□□□ -0.22
HMGXB3-201ENST00000502717 PLA2G5P39877 138 aa13.66□□□□□ -0.22
HMGXB3-201ENST00000502717 NEGR1Q7Z3B1 354 aa13.65□□□□□ -0.22
HMGXB3-201ENST00000502717 RNF114Q9Y508 228 aa13.65□□□□□ -0.22
HMGXB3-201ENST00000502717 IGLV3-9A0A075B6K5 115 aa13.65□□□□□ -0.22
HMGXB3-201ENST00000502717 PMVKQ15126 192 aa13.65□□□□□ -0.22
HMGXB3-201ENST00000502717 A0A1B0GXF2 115 aa13.65□□□□□ -0.22
HMGXB3-201ENST00000502717 DUSP14O95147 198 aaKnown RBP13.65□□□□□ -0.22
HMGXB3-201ENST00000502717 DUX3Q96PT4 197 aa13.65□□□□□ -0.22
HMGXB3-201ENST00000502717 H3BMM0 161 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms