RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 HOXB5P09067 269 aa10.34□□□□□ -0.75
HDAC6-236ENST00000498808 VAMP1P23763 118 aa10.34□□□□□ -0.75
HDAC6-236ENST00000498808 POLR2GP62487 172 aaKnown RBP eCLIP10.34□□□□□ -0.75
HDAC6-236ENST00000498808 LINC01556Q5JQF7 62 aa10.34□□□□□ -0.75
HDAC6-236ENST00000498808 PRR9Q5T870 116 aa10.34□□□□□ -0.75
HDAC6-236ENST00000498808 IQCF2Q8IXL9 164 aa10.34□□□□□ -0.75
HDAC6-236ENST00000498808 PSENENQ9NZ42 101 aa10.34□□□□□ -0.75
HDAC6-236ENST00000498808 RGS13O14921 159 aa10.33□□□□□ -0.76
HDAC6-236ENST00000498808 COX7A2P2O60397 106 aa10.33□□□□□ -0.76
HDAC6-236ENST00000498808 ORM1P02763 201 aa10.33□□□□□ -0.76
HDAC6-236ENST00000498808 ID3Q02535 119 aa10.33□□□□□ -0.76
HDAC6-236ENST00000498808 IL18Q14116 193 aa10.33□□□□□ -0.76
HDAC6-236ENST00000498808 ZNF546Q86UE3 836 aa10.33□□□□□ -0.76
HDAC6-236ENST00000498808 TXNDC17Q9BRA2 123 aa10.33□□□□□ -0.76
HDAC6-236ENST00000498808 AGPAT4-IT1Q9H0P7 198 aa10.33□□□□□ -0.76
HDAC6-236ENST00000498808 CCDC59Q9P031 241 aaKnown RBP10.33□□□□□ -0.76
HDAC6-236ENST00000498808 RNF213Q63HN8 5207 aa10.32□□□□□ -0.76
HDAC6-236ENST00000498808 IGHV1OR15-1A0A075B7D0 117 aa10.32□□□□□ -0.76
HDAC6-236ENST00000498808 FNDC10F2Z333 226 aa10.32□□□□□ -0.76
HDAC6-236ENST00000498808 GOSR2O14653 212 aa10.32□□□□□ -0.76
HDAC6-236ENST00000498808 AGPAT2O15120 278 aa10.32□□□□□ -0.76
HDAC6-236ENST00000498808 METTL15P1P0C7V9 234 aa10.32□□□□□ -0.76
HDAC6-236ENST00000498808 CRISP2P16562 243 aa10.32□□□□□ -0.76
HDAC6-236ENST00000498808 LINC01620Q4KN68 170 aa10.32□□□□□ -0.76
HDAC6-236ENST00000498808 TMEM14EPQ6UXP3 125 aa10.32□□□□□ -0.76
HDAC6-236ENST00000498808 ZFAND2AQ8N6M9 145 aa10.32□□□□□ -0.76
HDAC6-236ENST00000498808 BLNKQ8WV28 456 aa10.32□□□□□ -0.76
HDAC6-236ENST00000498808 MRPL53Q96EL3 112 aaKnown RBP10.32□□□□□ -0.76
HDAC6-236ENST00000498808 ARPC5LQ9BPX5 153 aa10.32□□□□□ -0.76
HDAC6-236ENST00000498808 LOC100131303A0A0U1RQF7 123 aa10.31□□□□□ -0.76
HDAC6-236ENST00000498808 GPX1P07203 203 aa10.31□□□□□ -0.76
HDAC6-236ENST00000498808 GUK1Q16774 197 aa10.31□□□□□ -0.76
HDAC6-236ENST00000498808 C10orf113Q5VZT2 155 aa10.31□□□□□ -0.76
HDAC6-236ENST00000498808 OR10P1Q8NGE3 313 aa10.31□□□□□ -0.76
HDAC6-236ENST00000498808 OR10G4Q8NGN3 311 aa10.31□□□□□ -0.76
HDAC6-236ENST00000498808 LINC00477Q96M19 166 aa10.31□□□□□ -0.76
HDAC6-236ENST00000498808 LRP2P98164 4655 aa10.3□□□□□ -0.76
HDAC6-236ENST00000498808 C9JCJ5 164 aa10.3□□□□□ -0.76
HDAC6-236ENST00000498808 SSSCA1O60232 199 aa10.3□□□□□ -0.76
HDAC6-236ENST00000498808 ZNF253O75346 499 aa10.3□□□□□ -0.76
HDAC6-236ENST00000498808 SFT2D2O95562 160 aa10.3□□□□□ -0.76
HDAC6-236ENST00000498808 TIRAPP58753 221 aa10.3□□□□□ -0.76
HDAC6-236ENST00000498808 PPP1R1AQ13522 171 aa10.3□□□□□ -0.76
HDAC6-236ENST00000498808 DIRAS2Q96HU8 199 aa10.3□□□□□ -0.76
HDAC6-236ENST00000498808 SMIM8Q96KF7 97 aa10.3□□□□□ -0.76
HDAC6-236ENST00000498808 MGST2Q99735 147 aa10.3□□□□□ -0.76
HDAC6-236ENST00000498808 MGAT4CQ9UBM8 478 aa10.3□□□□□ -0.76
HDAC6-236ENST00000498808 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-236ENST00000498808 ARL16Q0P5N6 197 aa10.29□□□□□ -0.76
HDAC6-236ENST00000498808 LECT2O14960 151 aa10.28□□□□□ -0.76
HDAC6-236ENST00000498808 NDUFB4O95168 129 aa10.28□□□□□ -0.76
HDAC6-236ENST00000498808 NMBP08949 121 aa10.28□□□□□ -0.76
HDAC6-236ENST00000498808 C9orf47Q6ZRZ4 202 aa10.28□□□□□ -0.76
HDAC6-236ENST00000498808 RASL10AQ92737 203 aa10.28□□□□□ -0.76
HDAC6-236ENST00000498808 CHAC1Q9BUX1 264 aa10.28□□□□□ -0.76
HDAC6-236ENST00000498808 SLC25A31Q9H0C2 315 aa10.28□□□□□ -0.76
HDAC6-236ENST00000498808 TRBV19A0A075B6N1 114 aa10.27□□□□□ -0.77
HDAC6-236ENST00000498808 IGHV3-30P01768 117 aa10.27□□□□□ -0.77
HDAC6-236ENST00000498808 IGHV3-33P01772 117 aa10.27□□□□□ -0.77
HDAC6-236ENST00000498808 IGHV3-30-3P0DP02 117 aa10.27□□□□□ -0.77
HDAC6-236ENST00000498808 IGHV3-30-5P0DP03 117 aa10.27□□□□□ -0.77
HDAC6-236ENST00000498808 PPT1P50897 306 aa10.27□□□□□ -0.77
HDAC6-236ENST00000498808 CIRBP-AS1Q8TBR5 109 aa10.27□□□□□ -0.77
HDAC6-236ENST00000498808 RAB2BQ8WUD1 216 aa10.27□□□□□ -0.77
HDAC6-236ENST00000498808 DNAJC4Q9NNZ3 241 aa10.27□□□□□ -0.77
HDAC6-236ENST00000498808 RABL2AQ9UBK7 228 aaPredicted RBP10.27□□□□□ -0.77
HDAC6-236ENST00000498808 IGKV2-40A0A087WW87 121 aaPredicted RBP10.26□□□□□ -0.77
HDAC6-236ENST00000498808 IGKV2D-40P01614 121 aaPredicted RBP10.26□□□□□ -0.77
HDAC6-236ENST00000498808 HNRNPA3P51991 378 aaKnown RBP10.26□□□□□ -0.77
HDAC6-236ENST00000498808 ZNF846Q147U1 533 aa10.26□□□□□ -0.77
HDAC6-236ENST00000498808 SH2D6Q7Z4S9 175 aa10.26□□□□□ -0.77
HDAC6-236ENST00000498808 NHLRC2Q8NBF2 726 aa10.26□□□□□ -0.77
HDAC6-236ENST00000498808 TM2D2Q9BX73 214 aa10.26□□□□□ -0.77
HDAC6-236ENST00000498808 SRRQ9GZT4 340 aa10.26□□□□□ -0.77
HDAC6-236ENST00000498808 PRELID1Q9Y255 219 aa10.26□□□□□ -0.77
HDAC6-236ENST00000498808 TRAV8-6A0A0B4J262 113 aa10.25□□□□□ -0.77
HDAC6-236ENST00000498808 TRAV4A0A0B4J268 109 aa10.25□□□□□ -0.77
HDAC6-236ENST00000498808 MT1HL1P0DM35 61 aa10.25□□□□□ -0.77
HDAC6-236ENST00000498808 LAGE3Q14657 143 aa10.25□□□□□ -0.77
HDAC6-236ENST00000498808 MUC21Q5SSG8 566 aa10.25□□□□□ -0.77
HDAC6-236ENST00000498808 MIC13Q5XKP0 118 aa10.25□□□□□ -0.77
HDAC6-236ENST00000498808 EXOC3-AS1Q8N2X6 119 aa10.25□□□□□ -0.77
HDAC6-236ENST00000498808 SOSTQ9BQB4 213 aa10.25□□□□□ -0.77
HDAC6-236ENST00000498808 ZNF492Q9P255 531 aa10.25□□□□□ -0.77
HDAC6-236ENST00000498808 RS1O15537 224 aa10.24□□□□□ -0.77
HDAC6-236ENST00000498808 TNFSF8P32971 234 aa10.24□□□□□ -0.77
HDAC6-236ENST00000498808 OR10J3Q5JRS4 329 aa10.24□□□□□ -0.77
HDAC6-236ENST00000498808 TMEM78Q5T7P6 136 aa10.24□□□□□ -0.77
HDAC6-236ENST00000498808 GGACTQ9BVM4 153 aa10.24□□□□□ -0.77
HDAC6-236ENST00000498808 RSL24D1Q9UHA3 163 aaKnown RBP10.24□□□□□ -0.77
HDAC6-236ENST00000498808 TSC22D2O75157 780 aa10.23□□□□□ -0.77
HDAC6-236ENST00000498808 IGLV2-8P01709 118 aa10.23□□□□□ -0.77
HDAC6-236ENST00000498808 FAUP35544 74 aaKnown RBP10.23□□□□□ -0.77
HDAC6-236ENST00000498808 CAMLGP49069 296 aa10.23□□□□□ -0.77
HDAC6-236ENST00000498808 ASAH1Q13510 395 aa10.23□□□□□ -0.77
HDAC6-236ENST00000498808 SPCS2Q15005 226 aa10.23□□□□□ -0.77
HDAC6-236ENST00000498808 TDRG1Q3Y452 100 aa10.23□□□□□ -0.77
HDAC6-236ENST00000498808 Q6ZRG5 221 aa10.23□□□□□ -0.77
HDAC6-236ENST00000498808 Q8N3U1 123 aa10.23□□□□□ -0.77
HDAC6-236ENST00000498808 MCFD2Q8NI22 146 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms