RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-218ENST00000498136 SMLR1H3BR10 107 aa11.93□□□□□ -0.5
ABCF3-218ENST00000498136 ARPC5O15511 151 aa11.93□□□□□ -0.5
ABCF3-218ENST00000498136 HTN3P15516 51 aa11.93□□□□□ -0.5
ABCF3-218ENST00000498136 OR2G3Q8NGZ4 309 aa11.93□□□□□ -0.5
ABCF3-218ENST00000498136 C16orf74Q96GX8 76 aa11.93□□□□□ -0.5
ABCF3-218ENST00000498136 HYLS1Q96M11 299 aa11.93□□□□□ -0.5
ABCF3-218ENST00000498136 SH3BGRL3Q9H299 93 aa11.93□□□□□ -0.5
ABCF3-218ENST00000498136 PLECQ15149 4684 aaKnown RBP11.93□□□□□ -0.5
ABCF3-218ENST00000498136 ALMS1Q8TCU4 4167 aa11.92□□□□□ -0.5
ABCF3-218ENST00000498136 IGHV4-4A0A075B6R2 117 aa11.92□□□□□ -0.5
ABCF3-218ENST00000498136 MBP02144 154 aa11.92□□□□□ -0.5
ABCF3-218ENST00000498136 TCTAP57738 103 aa11.92□□□□□ -0.5
ABCF3-218ENST00000498136 SERF2P84101 59 aa11.92□□□□□ -0.5
ABCF3-218ENST00000498136 C9orf47Q6ZRZ4 202 aa11.92□□□□□ -0.5
ABCF3-218ENST00000498136 CCDC28AQ8IWP9 274 aa11.92□□□□□ -0.5
ABCF3-218ENST00000498136 GNPNAT1Q96EK6 184 aaPredicted RBP11.92□□□□□ -0.5
ABCF3-218ENST00000498136 VGLL1Q99990 258 aa11.92□□□□□ -0.5
ABCF3-218ENST00000498136 RPH3ALQ9UNE2 315 aa11.92□□□□□ -0.5
ABCF3-218ENST00000498136 LYRM9A8MSI8 78 aa11.91□□□□□ -0.5
ABCF3-218ENST00000498136 G3V3Q6 166 aa11.91□□□□□ -0.5
ABCF3-218ENST00000498136 SLC25A5P05141 298 aaKnown RBP11.91□□□□□ -0.5
ABCF3-218ENST00000498136 ARL14EPLP0DKL9 152 aa11.91□□□□□ -0.5
ABCF3-218ENST00000498136 FAM74A1Q5RGS3 127 aa11.91□□□□□ -0.5
ABCF3-218ENST00000498136 CMTM2Q8TAZ6 248 aa11.91□□□□□ -0.5
ABCF3-218ENST00000498136 C7orf71A4D174 169 aa11.9□□□□□ -0.5
ABCF3-218ENST00000498136 PGPA6NDG6 321 aa11.9□□□□□ -0.5
ABCF3-218ENST00000498136 GPX1P07203 203 aa11.9□□□□□ -0.5
ABCF3-218ENST00000498136 DEFB130BP0DP73 79 aa11.9□□□□□ -0.5
ABCF3-218ENST00000498136 DEFB130AP0DP74 79 aa11.9□□□□□ -0.5
ABCF3-218ENST00000498136 RXFP4Q8TDU9 374 aa11.9□□□□□ -0.5
ABCF3-218ENST00000498136 TMEM263Q8WUH6 116 aaKnown RBP11.9□□□□□ -0.5
ABCF3-218ENST00000498136 RAB24Q969Q5 203 aa11.9□□□□□ -0.5
ABCF3-218ENST00000498136 OTORQ9NRC9 128 aa11.9□□□□□ -0.5
ABCF3-218ENST00000498136 APLNQ9ULZ1 77 aa11.9□□□□□ -0.5
ABCF3-218ENST00000498136 TIMM8BQ9Y5J9 83 aaPredicted RBP11.9□□□□□ -0.5
ABCF3-218ENST00000498136 TAAR5O14804 337 aa11.89□□□□□ -0.51
ABCF3-218ENST00000498136 RNASE4P34096 147 aaKnown RBP11.89□□□□□ -0.51
ABCF3-218ENST00000498136 ZNF138P52744 262 aa11.89□□□□□ -0.51
ABCF3-218ENST00000498136 BTN1A1Q13410 526 aa11.89□□□□□ -0.51
ABCF3-218ENST00000498136 LGALS9CQ6DKI2 356 aa11.89□□□□□ -0.51
ABCF3-218ENST00000498136 ZNF493Q6ZR52 646 aa11.89□□□□□ -0.51
ABCF3-218ENST00000498136 Q8TAT8 98 aa11.89□□□□□ -0.51
ABCF3-218ENST00000498136 ACTR3CQ9C0K3 210 aaPredicted RBP11.89□□□□□ -0.51
ABCF3-218ENST00000498136 ZNF492Q9P255 531 aa11.89□□□□□ -0.51
ABCF3-218ENST00000498136 PLAC8L1A1L4L8 177 aa11.88□□□□□ -0.51
ABCF3-218ENST00000498136 RBAKDNA6NC62 111 aa11.88□□□□□ -0.51
ABCF3-218ENST00000498136 DIRC3C9JPN6 131 aa11.88□□□□□ -0.51
ABCF3-218ENST00000498136 STAG3L2P0CL84 134 aa11.88□□□□□ -0.51
ABCF3-218ENST00000498136 STAG3L3P0CL85 134 aa11.88□□□□□ -0.51
ABCF3-218ENST00000498136 CD300CQ08708 224 aa11.88□□□□□ -0.51
ABCF3-218ENST00000498136 IQCF2Q8IXL9 164 aa11.88□□□□□ -0.51
ABCF3-218ENST00000498136 RNASE8Q8TDE3 154 aaKnown RBP11.88□□□□□ -0.51
ABCF3-218ENST00000498136 FAM19A4Q96LR4 140 aa11.88□□□□□ -0.51
ABCF3-218ENST00000498136 PYGO2Q9BRQ0 406 aa11.88□□□□□ -0.51
ABCF3-218ENST00000498136 NDUFAF3Q9BU61 184 aa11.88□□□□□ -0.51
ABCF3-218ENST00000498136 NOP10Q9NPE3 64 aaKnown RBP11.88□□□□□ -0.51
ABCF3-218ENST00000498136 RYR2Q92736 4967 aa11.88□□□□□ -0.51
ABCF3-218ENST00000498136 SNURFLB1AK76 121 aa11.87□□□□□ -0.51
ABCF3-218ENST00000498136 KLLNB2CW77 178 aa11.87□□□□□ -0.51
ABCF3-218ENST00000498136 CRISP2P16562 243 aa11.87□□□□□ -0.51
ABCF3-218ENST00000498136 CXorf1O96002 111 aa11.86□□□□□ -0.51
ABCF3-218ENST00000498136 NMBP08949 121 aa11.86□□□□□ -0.51
ABCF3-218ENST00000498136 GCHFRP30047 84 aa11.86□□□□□ -0.51
ABCF3-218ENST00000498136 AKR1C8PQ5T2L2 129 aa11.86□□□□□ -0.51
ABCF3-218ENST00000498136 DNAH1Q9P2D7 4330 aa11.85□□□□□ -0.51
ABCF3-218ENST00000498136 CBY3A6NI87 242 aa11.85□□□□□ -0.51
ABCF3-218ENST00000498136 RGS13O14921 159 aa11.85□□□□□ -0.51
ABCF3-218ENST00000498136 PRR9Q5T870 116 aa11.85□□□□□ -0.51
ABCF3-218ENST00000498136 GOLT1AQ6ZVE7 132 aa11.85□□□□□ -0.51
ABCF3-218ENST00000498136 ZFAND2AQ8N6M9 145 aa11.85□□□□□ -0.51
ABCF3-218ENST00000498136 ARPC5LQ9BPX5 153 aa11.85□□□□□ -0.51
ABCF3-218ENST00000498136 HYDINQ4G0P3 5121 aa11.84□□□□□ -0.51
ABCF3-218ENST00000498136 ZNF324O75467 553 aaPredicted RBP11.84□□□□□ -0.51
ABCF3-218ENST00000498136 GNG5P63218 68 aa11.84□□□□□ -0.51
ABCF3-218ENST00000498136 ZNF345Q14585 488 aa11.84□□□□□ -0.51
ABCF3-218ENST00000498136 SSX7Q7RTT5 188 aa11.84□□□□□ -0.51
ABCF3-218ENST00000498136 KCNRGQ8N5I3 272 aa11.84□□□□□ -0.51
ABCF3-218ENST00000498136 EIF4E3Q8N5X7 224 aaKnown RBP11.84□□□□□ -0.51
ABCF3-218ENST00000498136 CYTL1Q9NRR1 136 aa11.84□□□□□ -0.51
ABCF3-218ENST00000498136 TMEM167BQ9NRX6 74 aa11.84□□□□□ -0.51
ABCF3-218ENST00000498136 TRBV7-9A0A0J9YWB2 115 aa11.83□□□□□ -0.52
ABCF3-218ENST00000498136 CTXND1A0A1B0GTU2 59 aa11.83□□□□□ -0.52
ABCF3-218ENST00000498136 HMSDA8MTL9 139 aa11.83□□□□□ -0.52
ABCF3-218ENST00000498136 F5H768 121 aa11.83□□□□□ -0.52
ABCF3-218ENST00000498136 ATP5G1P05496 136 aa11.83□□□□□ -0.52
ABCF3-218ENST00000498136 ATP5G3P48201 142 aa11.83□□□□□ -0.52
ABCF3-218ENST00000498136 ZNF680Q8NEM1 530 aa11.83□□□□□ -0.52
ABCF3-218ENST00000498136 OR11H4Q8NGC9 324 aa11.83□□□□□ -0.52
ABCF3-218ENST00000498136 FAM210BQ96KR6 192 aa11.83□□□□□ -0.52
ABCF3-218ENST00000498136 A0A0D9SG52 128 aa11.82□□□□□ -0.52
ABCF3-218ENST00000498136 SUMO1P63165 101 aaKnown RBP11.82□□□□□ -0.52
ABCF3-218ENST00000498136 TMEM88Q6PEY1 159 aa11.82□□□□□ -0.52
ABCF3-218ENST00000498136 ARL6IP6Q8N6S5 226 aa11.82□□□□□ -0.52
ABCF3-218ENST00000498136 ST6GAL2Q96JF0 529 aa11.82□□□□□ -0.52
ABCF3-218ENST00000498136 GSN-AS1Q9NRJ2 163 aa11.82□□□□□ -0.52
ABCF3-218ENST00000498136 LENEPQ9Y5L5 61 aa11.82□□□□□ -0.52
ABCF3-218ENST00000498136 IGHV1OR15-1A0A075B7D0 117 aa11.81□□□□□ -0.52
ABCF3-218ENST00000498136 TRAV8-1A0A0A6YYK1 113 aa11.81□□□□□ -0.52
ABCF3-218ENST00000498136 KANTRA0A1W2PQU2 76 aa11.81□□□□□ -0.52
ABCF3-218ENST00000498136 GAGE12BA1L429 117 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms