RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 BCL2L11O43521 198 aa13.84□□□□□ -0.19
CTDSP1-213ENST00000496785 PFDN1O60925 122 aa13.84□□□□□ -0.19
CTDSP1-213ENST00000496785 GCHFRP30047 84 aa13.84□□□□□ -0.19
CTDSP1-213ENST00000496785 ERCC8Q13216 396 aa13.84□□□□□ -0.19
CTDSP1-213ENST00000496785 NIPSNAP3BQ9BS92 247 aa13.84□□□□□ -0.19
CTDSP1-213ENST00000496785 AGPAT4-IT1Q9H0P7 198 aa13.84□□□□□ -0.19
CTDSP1-213ENST00000496785 IGKV2-40A0A087WW87 121 aaPredicted RBP13.83□□□□□ -0.2
CTDSP1-213ENST00000496785 PGPA6NDG6 321 aa13.83□□□□□ -0.2
CTDSP1-213ENST00000496785 EIF3GO75821 320 aaKnown RBP eCLIP13.83□□□□□ -0.2
CTDSP1-213ENST00000496785 IGKV2D-40P01614 121 aaPredicted RBP13.83□□□□□ -0.2
CTDSP1-213ENST00000496785 EMP1P54849 157 aa13.83□□□□□ -0.2
CTDSP1-213ENST00000496785 GFI1BQ5VTD9 330 aa13.83□□□□□ -0.2
CTDSP1-213ENST00000496785 ST6GAL2Q96JF0 529 aa13.83□□□□□ -0.2
CTDSP1-213ENST00000496785 ZNF471Q9BX82 626 aaPredicted RBP13.83□□□□□ -0.2
CTDSP1-213ENST00000496785 TRAV10A0A0B4J240 114 aa13.82□□□□□ -0.2
CTDSP1-213ENST00000496785 SEC11BP0C7V7 166 aa13.82□□□□□ -0.2
CTDSP1-213ENST00000496785 CRISP2P16562 243 aa13.82□□□□□ -0.2
CTDSP1-213ENST00000496785 ZNF138P52744 262 aa13.82□□□□□ -0.2
CTDSP1-213ENST00000496785 ZNF493Q6ZR52 646 aa13.82□□□□□ -0.2
CTDSP1-213ENST00000496785 CCDC28AQ8IWP9 274 aa13.82□□□□□ -0.2
CTDSP1-213ENST00000496785 SUN5Q8TC36 379 aa13.82□□□□□ -0.2
CTDSP1-213ENST00000496785 C16orf74Q96GX8 76 aa13.82□□□□□ -0.2
CTDSP1-213ENST00000496785 HYLS1Q96M11 299 aa13.82□□□□□ -0.2
CTDSP1-213ENST00000496785 ZNF492Q9P255 531 aa13.82□□□□□ -0.2
CTDSP1-213ENST00000496785 YTHDF2Q9Y5A9 579 aaKnown RBP13.82□□□□□ -0.2
CTDSP1-213ENST00000496785 LENEPQ9Y5L5 61 aa13.82□□□□□ -0.2
CTDSP1-213ENST00000496785 SERTM2A0A1B0GWG4 89 aa13.81□□□□□ -0.2
CTDSP1-213ENST00000496785 ZNF705GA8MUZ8 300 aaPredicted RBP13.81□□□□□ -0.2
CTDSP1-213ENST00000496785 DIRC3C9JPN6 131 aa13.81□□□□□ -0.2
CTDSP1-213ENST00000496785 IQCF2Q8IXL9 164 aa13.81□□□□□ -0.2
CTDSP1-213ENST00000496785 TMED6Q8WW62 240 aa13.81□□□□□ -0.2
CTDSP1-213ENST00000496785 FAM19A4Q96LR4 140 aa13.81□□□□□ -0.2
CTDSP1-213ENST00000496785 DKK2Q9UBU2 259 aa13.81□□□□□ -0.2
CTDSP1-213ENST00000496785 CELA1Q9UNI1 258 aa13.81□□□□□ -0.2
CTDSP1-213ENST00000496785 C7orf71A4D174 169 aa13.8□□□□□ -0.2
CTDSP1-213ENST00000496785 KLLNB2CW77 178 aa13.8□□□□□ -0.2
CTDSP1-213ENST00000496785 UMAD1C9J7I0 102 aa13.8□□□□□ -0.2
CTDSP1-213ENST00000496785 J3KRW8 73 aa13.8□□□□□ -0.2
CTDSP1-213ENST00000496785 GPX1P07203 203 aa13.8□□□□□ -0.2
CTDSP1-213ENST00000496785 FAM222AQ5U5X8 452 aa13.8□□□□□ -0.2
CTDSP1-213ENST00000496785 Q6ZTC4 211 aa13.8□□□□□ -0.2
CTDSP1-213ENST00000496785 AKAP14Q86UN6 197 aa13.8□□□□□ -0.2
CTDSP1-213ENST00000496785 C5orf17Q8NAS9 161 aa13.8□□□□□ -0.2
CTDSP1-213ENST00000496785 STOML3Q8TAV4 291 aa13.8□□□□□ -0.2
CTDSP1-213ENST00000496785 C2CD4CQ8TF44 421 aa13.8□□□□□ -0.2
CTDSP1-213ENST00000496785 VGLL1Q99990 258 aa13.8□□□□□ -0.2
CTDSP1-213ENST00000496785 PYGO2Q9BRQ0 406 aa13.8□□□□□ -0.2
CTDSP1-213ENST00000496785 TRAV12-3A0A0B4J271 114 aa13.79□□□□□ -0.2
CTDSP1-213ENST00000496785 LYRM9A8MSI8 78 aa13.79□□□□□ -0.2
CTDSP1-213ENST00000496785 K7EQM0 130 aa13.79□□□□□ -0.2
CTDSP1-213ENST00000496785 C1QBP02746 253 aa13.79□□□□□ -0.2
CTDSP1-213ENST00000496785 TPT1P13693 172 aaKnown RBP13.79□□□□□ -0.2
CTDSP1-213ENST00000496785 HTN1P15515 57 aa13.79□□□□□ -0.2
CTDSP1-213ENST00000496785 TCTAP57738 103 aa13.79□□□□□ -0.2
CTDSP1-213ENST00000496785 TMUB2Q71RG4 321 aa13.79□□□□□ -0.2
CTDSP1-213ENST00000496785 TMEM263Q8WUH6 116 aaKnown RBP13.79□□□□□ -0.2
CTDSP1-213ENST00000496785 RPH3ALQ9UNE2 315 aa13.79□□□□□ -0.2
CTDSP1-213ENST00000496785 hCG_2014768A0A024R1R8 64 aa13.78□□□□□ -0.2
CTDSP1-213ENST00000496785 LCE6AA0A183 80 aa13.78□□□□□ -0.2
CTDSP1-213ENST00000496785 KIR3DS1Q14943 382 aa13.78□□□□□ -0.2
CTDSP1-213ENST00000496785 C12orf74Q32Q52 190 aa13.78□□□□□ -0.2
CTDSP1-213ENST00000496785 A0A1W2PRE2 83 aa13.77□□□□□ -0.21
CTDSP1-213ENST00000496785 MAP1LC3B2A6NCE7 125 aa13.77□□□□□ -0.21
CTDSP1-213ENST00000496785 ZNF726P1Q15940 193 aa13.77□□□□□ -0.21
CTDSP1-213ENST00000496785 EIF5AL1Q6IS14 154 aaKnown RBP13.77□□□□□ -0.21
CTDSP1-213ENST00000496785 GOLT1AQ6ZVE7 132 aa13.77□□□□□ -0.21
CTDSP1-213ENST00000496785 SSX7Q7RTT5 188 aa13.77□□□□□ -0.21
CTDSP1-213ENST00000496785 NKX6-2Q9C056 277 aaPredicted RBP13.77□□□□□ -0.21
CTDSP1-213ENST00000496785 MAP1LC3BQ9GZQ8 125 aa13.77□□□□□ -0.21
CTDSP1-213ENST00000496785 RNASE4P34096 147 aaKnown RBP13.76□□□□□ -0.21
CTDSP1-213ENST00000496785 DAD1P61803 113 aa13.76□□□□□ -0.21
CTDSP1-213ENST00000496785 DPPA3Q6W0C5 159 aa13.76□□□□□ -0.21
CTDSP1-213ENST00000496785 ZFAND2AQ8N6M9 145 aa13.76□□□□□ -0.21
CTDSP1-213ENST00000496785 Q8TAT8 98 aa13.76□□□□□ -0.21
CTDSP1-213ENST00000496785 TIMM8BQ9Y5J9 83 aaPredicted RBP13.76□□□□□ -0.21
CTDSP1-213ENST00000496785 DEFB131BA0A096LNP1 70 aa13.75□□□□□ -0.21
CTDSP1-213ENST00000496785 FBLL1A6NHQ2 334 aaKnown RBP13.75□□□□□ -0.21
CTDSP1-213ENST00000496785 AZU1P20160 251 aa13.75□□□□□ -0.21
CTDSP1-213ENST00000496785 SUMO1P63165 101 aaKnown RBP13.75□□□□□ -0.21
CTDSP1-213ENST00000496785 BTN1A1Q13410 526 aa13.75□□□□□ -0.21
CTDSP1-213ENST00000496785 ZNF680Q8NEM1 530 aa13.75□□□□□ -0.21
CTDSP1-213ENST00000496785 RNASE8Q8TDE3 154 aaKnown RBP13.75□□□□□ -0.21
CTDSP1-213ENST00000496785 LINC00467Q9BRT7 94 aa13.75□□□□□ -0.21
CTDSP1-213ENST00000496785 NDFIP1Q9BT67 221 aa13.75□□□□□ -0.21
CTDSP1-213ENST00000496785 SNURFLB1AK76 121 aa13.74□□□□□ -0.21
CTDSP1-213ENST00000496785 TCRAP04437 139 aa13.74□□□□□ -0.21
CTDSP1-213ENST00000496785 CD300CQ08708 224 aa13.74□□□□□ -0.21
CTDSP1-213ENST00000496785 ZNF767PQ75MW2 155 aa13.74□□□□□ -0.21
CTDSP1-213ENST00000496785 GGTLC3B5MD39 225 aa13.73□□□□□ -0.21
CTDSP1-213ENST00000496785 RGS13O14921 159 aa13.73□□□□□ -0.21
CTDSP1-213ENST00000496785 ZNF324O75467 553 aaPredicted RBP13.73□□□□□ -0.21
CTDSP1-213ENST00000496785 FGF8P55075 233 aaPredicted RBP13.73□□□□□ -0.21
CTDSP1-213ENST00000496785 GNG5P63218 68 aa13.73□□□□□ -0.21
CTDSP1-213ENST00000496785 EIF4E3Q8N5X7 224 aaKnown RBP13.73□□□□□ -0.21
CTDSP1-213ENST00000496785 ATG101Q9BSB4 218 aa13.73□□□□□ -0.21
CTDSP1-213ENST00000496785 EPDR1Q9UM22 224 aa13.73□□□□□ -0.21
CTDSP1-213ENST00000496785 STARD9Q9P2P6 4700 aa13.73□□□□□ -0.21
CTDSP1-213ENST00000496785 PLAC8L1A1L4L8 177 aa13.72□□□□□ -0.21
CTDSP1-213ENST00000496785 IGLL5B9A064 214 aa13.72□□□□□ -0.21
CTDSP1-213ENST00000496785 IFNA7P01567 189 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms