RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 C7orf71A4D174 169 aa23.42■■□□□ 1.34
CBX4-203ENST00000494546 ATP5G1P05496 136 aa23.42■■□□□ 1.34
CBX4-203ENST00000494546 ATP5G3P48201 142 aa23.42■■□□□ 1.34
CBX4-203ENST00000494546 C9orf47Q6ZRZ4 202 aa23.42■■□□□ 1.34
CBX4-203ENST00000494546 CBY3A6NI87 242 aa23.41■■□□□ 1.34
CBX4-203ENST00000494546 UBE2L3P68036 154 aaKnown RBP23.41■■□□□ 1.34
CBX4-203ENST00000494546 TMEM78Q5T7P6 136 aa23.41■■□□□ 1.34
CBX4-203ENST00000494546 FAM19A4Q96LR4 140 aa23.41■■□□□ 1.34
CBX4-203ENST00000494546 VGLL1Q99990 258 aa23.41■■□□□ 1.34
CBX4-203ENST00000494546 PYGO2Q9BRQ0 406 aa23.41■■□□□ 1.34
CBX4-203ENST00000494546 TAS2R45P59539 299 aa23.4■■□□□ 1.34
CBX4-203ENST00000494546 RANP62826 216 aaKnown RBP23.4■■□□□ 1.34
CBX4-203ENST00000494546 KHDC3LQ587J8 217 aa23.4■■□□□ 1.34
CBX4-203ENST00000494546 KLLNB2CW77 178 aa23.39■■□□□ 1.33
CBX4-203ENST00000494546 EIF3GO75821 320 aaKnown RBP eCLIP23.39■■□□□ 1.33
CBX4-203ENST00000494546 RNASE4P34096 147 aaKnown RBP23.39■■□□□ 1.33
CBX4-203ENST00000494546 CD300CQ08708 224 aa23.39■■□□□ 1.33
CBX4-203ENST00000494546 BTN1A1Q13410 526 aa23.39■■□□□ 1.33
CBX4-203ENST00000494546 C15orf53Q8NAA6 179 aa23.39■■□□□ 1.33
CBX4-203ENST00000494546 SNURFLB1AK76 121 aa23.38■■□□□ 1.33
CBX4-203ENST00000494546 GPX1P07203 203 aa23.37■■□□□ 1.33
CBX4-203ENST00000494546 CSN1S1P47710 185 aa23.37■■□□□ 1.33
CBX4-203ENST00000494546 ACOT6Q3I5F7 207 aaPredicted RBP23.37■■□□□ 1.33
CBX4-203ENST00000494546 Q9H3A6 140 aa23.37■■□□□ 1.33
CBX4-203ENST00000494546 DNAH6Q9C0G6 4158 aa23.35■■□□□ 1.33
CBX4-203ENST00000494546 M0R2N4 97 aa23.35■■□□□ 1.33
CBX4-203ENST00000494546 CRISP2P16562 243 aa23.35■■□□□ 1.33
CBX4-203ENST00000494546 M6PRP20645 277 aa23.35■■□□□ 1.33
CBX4-203ENST00000494546 LYPD1Q8N2G4 141 aa23.35■■□□□ 1.33
CBX4-203ENST00000494546 ZNF492Q9P255 531 aa23.35■■□□□ 1.33
CBX4-203ENST00000494546 A0A1W2PPV4 95 aa23.34■■□□□ 1.33
CBX4-203ENST00000494546 GAGE12BA1L429 117 aa23.34■■□□□ 1.33
CBX4-203ENST00000494546 ZNF324O75467 553 aaPredicted RBP23.34■■□□□ 1.33
CBX4-203ENST00000494546 GAGE7O76087 117 aa23.34■■□□□ 1.33
CBX4-203ENST00000494546 GAGE12FP0CL80 117 aa23.34■■□□□ 1.33
CBX4-203ENST00000494546 GAGE12GP0CL81 117 aa23.34■■□□□ 1.33
CBX4-203ENST00000494546 GAGE12IP0CL82 117 aa23.34■■□□□ 1.33
CBX4-203ENST00000494546 RAB2AP61019 212 aa23.34■■□□□ 1.33
CBX4-203ENST00000494546 NMBP08949 121 aa23.33■■□□□ 1.33
CBX4-203ENST00000494546 RNF212Q495C1 297 aa23.33■■□□□ 1.33
CBX4-203ENST00000494546 ZFAND2AQ8N6M9 145 aa23.33■■□□□ 1.33
CBX4-203ENST00000494546 Q8TAT8 98 aa23.33■■□□□ 1.33
CBX4-203ENST00000494546 FRAS1Q86XX4 4008 aa23.33■■□□□ 1.32
CBX4-203ENST00000494546 DNAH10Q8IVF4 4471 aa23.32■■□□□ 1.32
CBX4-203ENST00000494546 NUDT3O95989 172 aa23.32■■□□□ 1.32
CBX4-203ENST00000494546 ZNF138P52744 262 aa23.32■■□□□ 1.32
CBX4-203ENST00000494546 PRR9Q5T870 116 aa23.32■■□□□ 1.32
CBX4-203ENST00000494546 LINC00612Q8N6U2 182 aa23.32■■□□□ 1.32
CBX4-203ENST00000494546 AQP10Q96PS8 301 aa23.32■■□□□ 1.32
CBX4-203ENST00000494546 ZNF266Q14584 549 aa23.31■■□□□ 1.32
CBX4-203ENST00000494546 Q5BKY6 102 aa23.31■■□□□ 1.32
CBX4-203ENST00000494546 HSD17B11Q8NBQ5 300 aa23.31■■□□□ 1.32
CBX4-203ENST00000494546 GSN-AS1Q9NRJ2 163 aa23.31■■□□□ 1.32
CBX4-203ENST00000494546 IGLV2-18A0A075B6J9 118 aa23.3■■□□□ 1.32
CBX4-203ENST00000494546 GIPP09681 153 aaPredicted RBP23.3■■□□□ 1.32
CBX4-203ENST00000494546 EIF4E3Q8N5X7 224 aaKnown RBP23.3■■□□□ 1.32
CBX4-203ENST00000494546 ZNF680Q8NEM1 530 aa23.3■■□□□ 1.32
CBX4-203ENST00000494546 OR10G4Q8NGN3 311 aa23.3■■□□□ 1.32
CBX4-203ENST00000494546 OR10G9Q8NGN4 311 aa23.3■■□□□ 1.32
CBX4-203ENST00000494546 OR10G7Q8NGN6 311 aa23.3■■□□□ 1.32
CBX4-203ENST00000494546 HYLS1Q96M11 299 aa23.3■■□□□ 1.32
CBX4-203ENST00000494546 OR5I1Q13606 314 aa23.29■■□□□ 1.32
CBX4-203ENST00000494546 LINC00467Q9BRT7 94 aa23.29■■□□□ 1.32
CBX4-203ENST00000494546 ATG101Q9BSB4 218 aa23.29■■□□□ 1.32
CBX4-203ENST00000494546 RBAKDNA6NC62 111 aa23.28■■□□□ 1.32
CBX4-203ENST00000494546 HMGB3O15347 200 aaKnown RBP23.28■■□□□ 1.32
CBX4-203ENST00000494546 DAZ2Q13117 558 aaKnown RBP23.28■■□□□ 1.32
CBX4-203ENST00000494546 PQLC2Q6ZP29 291 aa23.28■■□□□ 1.32
CBX4-203ENST00000494546 RGS13O14921 159 aa23.27■■□□□ 1.32
CBX4-203ENST00000494546 ANXA2RQ3ZCQ2 193 aa23.27■■□□□ 1.32
CBX4-203ENST00000494546 Q6ZQT7 251 aa23.27■■□□□ 1.32
CBX4-203ENST00000494546 Q6ZTI0 123 aa23.27■■□□□ 1.32
CBX4-203ENST00000494546 C11orf72Q8NBR9 251 aa23.27■■□□□ 1.32
CBX4-203ENST00000494546 RXFP4Q8TDU9 374 aa23.27■■□□□ 1.32
CBX4-203ENST00000494546 OTORQ9NRC9 128 aa23.27■■□□□ 1.32
CBX4-203ENST00000494546 DIRC3C9JPN6 131 aa23.26■■□□□ 1.31
CBX4-203ENST00000494546 ASB13Q8WXK3 278 aa23.26■■□□□ 1.31
CBX4-203ENST00000494546 RPH3ALQ9UNE2 315 aa23.26■■□□□ 1.31
CBX4-203ENST00000494546 TRBV7-9A0A0J9YWB2 115 aa23.25■■□□□ 1.31
CBX4-203ENST00000494546 PGPA6NDG6 321 aa23.25■■□□□ 1.31
CBX4-203ENST00000494546 RGS21Q2M5E4 152 aa23.25■■□□□ 1.31
CBX4-203ENST00000494546 LGALS9BQ3B8N2 356 aa23.25■■□□□ 1.31
CBX4-203ENST00000494546 CMTM2Q8TAZ6 248 aa23.25■■□□□ 1.31
CBX4-203ENST00000494546 ATP6V0CP27449 155 aa23.24■■□□□ 1.31
CBX4-203ENST00000494546 FAM74A1Q5RGS3 127 aa23.24■■□□□ 1.31
CBX4-203ENST00000494546 INO80EQ8NBZ0 244 aaPredicted RBP23.24■■□□□ 1.31
CBX4-203ENST00000494546 TP53TG3Q9ULZ0 132 aa23.24■■□□□ 1.31
CBX4-203ENST00000494546 IGHV1OR15-1A0A075B7D0 117 aa23.23■■□□□ 1.31
CBX4-203ENST00000494546 TRAV26-1A0A087WT03 109 aa23.23■■□□□ 1.31
CBX4-203ENST00000494546 FXYD6-FXYD2A0A087WZ82 144 aa23.23■■□□□ 1.31
CBX4-203ENST00000494546 HOXA5P20719 270 aa23.23■■□□□ 1.31
CBX4-203ENST00000494546 CDC34P49427 236 aaPredicted RBP23.23■■□□□ 1.31
CBX4-203ENST00000494546 OR2G3Q8NGZ4 309 aa23.23■■□□□ 1.31
CBX4-203ENST00000494546 PSMG3Q9BT73 122 aaPredicted RBP23.23■■□□□ 1.31
CBX4-203ENST00000494546 TMPRSS5Q9H3S3 457 aa23.23■■□□□ 1.31
CBX4-203ENST00000494546 KLF12Q9Y4X4 402 aa23.23■■□□□ 1.31
CBX4-203ENST00000494546 GNPNAT1Q96EK6 184 aaPredicted RBP23.22■■□□□ 1.31
CBX4-203ENST00000494546 ARPC5LQ9BPX5 153 aa23.22■■□□□ 1.31
CBX4-203ENST00000494546 TRGV2A0A075B6R0 118 aa23.21■■□□□ 1.31
CBX4-203ENST00000494546 TRGV1A0A0A0MS02 117 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms