RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 IL17DQ8TAD2 202 aa9.04□□□□□ -0.96
TRA2A-209ENST00000494255 SFT2D1Q8WV19 159 aa9.04□□□□□ -0.96
TRA2A-209ENST00000494255 NEU1Q99519 415 aa9.04□□□□□ -0.96
TRA2A-209ENST00000494255 VGLL1Q99990 258 aa9.04□□□□□ -0.96
TRA2A-209ENST00000494255 C11orf68Q9H3H3 251 aaKnown RBP9.04□□□□□ -0.96
TRA2A-209ENST00000494255 X6R8D5 127 aa9.04□□□□□ -0.96
TRA2A-209ENST00000494255 TENM3Q9P273 2699 aa9.04□□□□□ -0.96
TRA2A-209ENST00000494255 IGHV4-28A0A0C4DH34 117 aa9.04□□□□□ -0.96
TRA2A-209ENST00000494255 A0A1W2PRE2 83 aa9.04□□□□□ -0.96
TRA2A-209ENST00000494255 SMIM9A6NGZ8 99 aa9.04□□□□□ -0.96
TRA2A-209ENST00000494255 CRXO43186 299 aaPredicted RBP9.04□□□□□ -0.96
TRA2A-209ENST00000494255 HBE1P02100 147 aa9.04□□□□□ -0.96
TRA2A-209ENST00000494255 H2AFB1P0C5Y9 115 aa9.04□□□□□ -0.96
TRA2A-209ENST00000494255 NKX2-5P52952 324 aaPredicted RBP9.04□□□□□ -0.96
TRA2A-209ENST00000494255 C1orf158Q8N1D5 194 aa9.04□□□□□ -0.96
TRA2A-209ENST00000494255 TMEM256Q8N2U0 113 aa9.04□□□□□ -0.96
TRA2A-209ENST00000494255 MUC7Q8TAX7 377 aa9.04□□□□□ -0.96
TRA2A-209ENST00000494255 TMPRSS5Q9H3S3 457 aa9.04□□□□□ -0.96
TRA2A-209ENST00000494255 J3KRW8 73 aa9.03□□□□□ -0.96
TRA2A-209ENST00000494255 K7EQM0 130 aa9.03□□□□□ -0.96
TRA2A-209ENST00000494255 DEFB4AO15263 64 aa9.03□□□□□ -0.96
TRA2A-209ENST00000494255 ZNF138P52744 262 aa9.03□□□□□ -0.96
TRA2A-209ENST00000494255 UBE2G2P60604 165 aa9.03□□□□□ -0.96
TRA2A-209ENST00000494255 SUMO1P63165 101 aaKnown RBP9.03□□□□□ -0.96
TRA2A-209ENST00000494255 GOLT1AQ6ZVE7 132 aa9.03□□□□□ -0.96
TRA2A-209ENST00000494255 Q8NAQ8 132 aa9.03□□□□□ -0.96
TRA2A-209ENST00000494255 MBD3L1Q8WWY6 194 aa9.03□□□□□ -0.96
TRA2A-209ENST00000494255 C20orf144Q9BQM9 153 aa9.03□□□□□ -0.96
TRA2A-209ENST00000494255 ZNF492Q9P255 531 aa9.03□□□□□ -0.96
TRA2A-209ENST00000494255 SERTM2A0A1B0GWG4 89 aa9.02□□□□□ -0.97
TRA2A-209ENST00000494255 GNG5P63218 68 aa9.02□□□□□ -0.97
TRA2A-209ENST00000494255 NKX6-2Q9C056 277 aaPredicted RBP9.02□□□□□ -0.97
TRA2A-209ENST00000494255 A0A1B0GV50 99 aa9.01□□□□□ -0.97
TRA2A-209ENST00000494255 TMEM189A5PLL7 270 aa9.01□□□□□ -0.97
TRA2A-209ENST00000494255 GGTLC3B5MD39 225 aa9.01□□□□□ -0.97
TRA2A-209ENST00000494255 TEX46H3BTG2 121 aa9.01□□□□□ -0.97
TRA2A-209ENST00000494255 IFNA7P01567 189 aa9.01□□□□□ -0.97
TRA2A-209ENST00000494255 SULT1A2P50226 295 aa9.01□□□□□ -0.97
TRA2A-209ENST00000494255 RRN3P1Q2M238 152 aa9.01□□□□□ -0.97
TRA2A-209ENST00000494255 GFI1BQ5VTD9 330 aa9.01□□□□□ -0.97
TRA2A-209ENST00000494255 LINC01587Q99440 93 aa9.01□□□□□ -0.97
TRA2A-209ENST00000494255 YTHDF2Q9Y5A9 579 aaKnown RBP9.01□□□□□ -0.97
TRA2A-209ENST00000494255 HUWE1Q7Z6Z7 4374 aaKnown RBP9.01□□□□□ -0.97
TRA2A-209ENST00000494255 TRBV7-9A0A0J9YWB2 115 aa9□□□□□ -0.97
TRA2A-209ENST00000494255 FAM74A7A6NL05 159 aa9□□□□□ -0.97
TRA2A-209ENST00000494255 TCRAP04437 139 aa9□□□□□ -0.97
TRA2A-209ENST00000494255 GPX1P07203 203 aa9□□□□□ -0.97
TRA2A-209ENST00000494255 NMBP08949 121 aa9□□□□□ -0.97
TRA2A-209ENST00000494255 RBMY1A1P0DJD3 496 aaKnown RBP9□□□□□ -0.97
TRA2A-209ENST00000494255 RBMY1CP0DJD4 496 aa9□□□□□ -0.97
TRA2A-209ENST00000494255 KIR3DS1Q14943 382 aa9□□□□□ -0.97
TRA2A-209ENST00000494255 RBMY1FQ15415 496 aaKnown RBP9□□□□□ -0.97
TRA2A-209ENST00000494255 Q8TAT8 98 aa9□□□□□ -0.97
TRA2A-209ENST00000494255 FAM19A4Q96LR4 140 aa9□□□□□ -0.97
TRA2A-209ENST00000494255 NIPSNAP3BQ9BS92 247 aa9□□□□□ -0.97
TRA2A-209ENST00000494255 EPDR1Q9UM22 224 aa9□□□□□ -0.97
TRA2A-209ENST00000494255 LENEPQ9Y5L5 61 aa9□□□□□ -0.97
TRA2A-209ENST00000494255 TRAV12-3A0A0B4J271 114 aa9□□□□□ -0.97
TRA2A-209ENST00000494255 LOC102723971A0A1B0GUV8 181 aa9□□□□□ -0.97
TRA2A-209ENST00000494255 C7orf71A4D174 169 aa9□□□□□ -0.97
TRA2A-209ENST00000494255 ZNF705GA8MUZ8 300 aaPredicted RBP9□□□□□ -0.97
TRA2A-209ENST00000494255 KLLNB2CW77 178 aa9□□□□□ -0.97
TRA2A-209ENST00000494255 C3orf84H3BNL1 204 aa9□□□□□ -0.97
TRA2A-209ENST00000494255 H7BYZ3 331 aa9□□□□□ -0.97
TRA2A-209ENST00000494255 CRISP2P16562 243 aa9□□□□□ -0.97
TRA2A-209ENST00000494255 RNASE4P34096 147 aaKnown RBP9□□□□□ -0.97
TRA2A-209ENST00000494255 PPT1P50897 306 aa9□□□□□ -0.97
TRA2A-209ENST00000494255 CST9LP1Q5W188 147 aa9□□□□□ -0.97
TRA2A-209ENST00000494255 ARL2-SNX15V9GYD0 113 aa9□□□□□ -0.97
TRA2A-209ENST00000494255 STAB2Q8WWQ8 2551 aa8.99□□□□□ -0.97
TRA2A-209ENST00000494255 HTN1P15515 57 aa8.99□□□□□ -0.97
TRA2A-209ENST00000494255 TAS2R60P59551 318 aa8.99□□□□□ -0.97
TRA2A-209ENST00000494255 ZFAND2AQ8N6M9 145 aa8.99□□□□□ -0.97
TRA2A-209ENST00000494255 CYB561D1Q8N8Q1 229 aa8.99□□□□□ -0.97
TRA2A-209ENST00000494255 C11orf45Q8TAV5 145 aa8.99□□□□□ -0.97
TRA2A-209ENST00000494255 ATG101Q9BSB4 218 aa8.99□□□□□ -0.97
TRA2A-209ENST00000494255 NDFIP1Q9BT67 221 aa8.99□□□□□ -0.97
TRA2A-209ENST00000494255 TRAV8-1A0A0A6YYK1 113 aa8.98□□□□□ -0.97
TRA2A-209ENST00000494255 F6UZH7 168 aa8.98□□□□□ -0.97
TRA2A-209ENST00000494255 PAGE4O60829 102 aa8.98□□□□□ -0.97
TRA2A-209ENST00000494255 EMP1P54849 157 aa8.98□□□□□ -0.97
TRA2A-209ENST00000494255 BTN1A1Q13410 526 aa8.98□□□□□ -0.97
TRA2A-209ENST00000494255 ALKAL2Q6UX46 152 aa8.98□□□□□ -0.97
TRA2A-209ENST00000494255 BOLA1Q9Y3E2 137 aa8.98□□□□□ -0.97
TRA2A-209ENST00000494255 TRAV1-1A0A0B4J248 108 aa8.97□□□□□ -0.97
TRA2A-209ENST00000494255 CXorf65A6NEN9 183 aa8.97□□□□□ -0.97
TRA2A-209ENST00000494255 FBLL1A6NHQ2 334 aaKnown RBP8.97□□□□□ -0.97
TRA2A-209ENST00000494255 PEX7O00628 323 aa8.97□□□□□ -0.97
TRA2A-209ENST00000494255 ZFAND6Q6FIF0 208 aa8.97□□□□□ -0.97
TRA2A-209ENST00000494255 CCDC28AQ8IWP9 274 aa8.97□□□□□ -0.97
TRA2A-209ENST00000494255 HIST1H2BAQ96A08 127 aa8.97□□□□□ -0.97
TRA2A-209ENST00000494255 PYGO2Q9BRQ0 406 aa8.97□□□□□ -0.97
TRA2A-209ENST00000494255 TCEAL7Q9BRU2 100 aa8.97□□□□□ -0.97
TRA2A-209ENST00000494255 TEX48A0A1B0GUV7 120 aa8.97□□□□□ -0.97
TRA2A-209ENST00000494255 FLI1Q01543 452 aaPredicted RBP8.97□□□□□ -0.97
TRA2A-209ENST00000494255 PMS2P11Q13670 270 aa8.97□□□□□ -0.97
TRA2A-209ENST00000494255 TMEM75Q8N9X5 138 aa8.97□□□□□ -0.97
TRA2A-209ENST00000494255 SGK494Q96LW2 274 aa8.97□□□□□ -0.97
TRA2A-209ENST00000494255 TREM1Q9NP99 234 aa8.97□□□□□ -0.97
TRA2A-209ENST00000494255 MANBALQ9NQG1 85 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms