RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 RPL12P30050 165 aaKnown RBP12.65□□□□□ -0.38
PTPRU-207ENST00000492954 LGALS9BQ3B8N2 356 aa12.65□□□□□ -0.38
PTPRU-207ENST00000492954 FXYD5Q96DB9 178 aa12.65□□□□□ -0.38
PTPRU-207ENST00000492954 LINC00477Q96M19 166 aa12.65□□□□□ -0.38
PTPRU-207ENST00000492954 KLLNB2CW77 178 aa12.64□□□□□ -0.39
PTPRU-207ENST00000492954 OR7C2O60412 319 aa12.64□□□□□ -0.39
PTPRU-207ENST00000492954 NUDT3O95989 172 aa12.64□□□□□ -0.39
PTPRU-207ENST00000492954 CD300CQ08708 224 aa12.64□□□□□ -0.39
PTPRU-207ENST00000492954 BTN1A1Q13410 526 aa12.64□□□□□ -0.39
PTPRU-207ENST00000492954 FFAR4Q5NUL3 377 aa12.64□□□□□ -0.39
PTPRU-207ENST00000492954 C9orf47Q6ZRZ4 202 aa12.64□□□□□ -0.39
PTPRU-207ENST00000492954 LINC00336Q6ZUF6 198 aa12.64□□□□□ -0.39
PTPRU-207ENST00000492954 LINC00612Q8N6U2 182 aa12.64□□□□□ -0.39
PTPRU-207ENST00000492954 RNF141Q8WVD5 230 aa12.64□□□□□ -0.39
PTPRU-207ENST00000492954 PHYHIPLQ96FC7 376 aa12.64□□□□□ -0.39
PTPRU-207ENST00000492954 FAM19A4Q96LR4 140 aa12.64□□□□□ -0.39
PTPRU-207ENST00000492954 PYGO2Q9BRQ0 406 aa12.64□□□□□ -0.39
PTPRU-207ENST00000492954 GAGE12BA1L429 117 aa12.63□□□□□ -0.39
PTPRU-207ENST00000492954 SNURFLB1AK76 121 aa12.63□□□□□ -0.39
PTPRU-207ENST00000492954 RTL8CO15255 209 aa12.63□□□□□ -0.39
PTPRU-207ENST00000492954 GAGE7O76087 117 aa12.63□□□□□ -0.39
PTPRU-207ENST00000492954 IFNA5P01569 189 aa12.63□□□□□ -0.39
PTPRU-207ENST00000492954 GAGE12FP0CL80 117 aa12.63□□□□□ -0.39
PTPRU-207ENST00000492954 GAGE12GP0CL81 117 aa12.63□□□□□ -0.39
PTPRU-207ENST00000492954 GAGE12IP0CL82 117 aa12.63□□□□□ -0.39
PTPRU-207ENST00000492954 Q6ZR54 194 aa12.63□□□□□ -0.39
PTPRU-207ENST00000492954 SCGB1C1Q8TD33 95 aa12.63□□□□□ -0.39
PTPRU-207ENST00000492954 ZNF503Q96F45 646 aa12.63□□□□□ -0.39
PTPRU-207ENST00000492954 VGLL1Q99990 258 aa12.63□□□□□ -0.39
PTPRU-207ENST00000492954 ATG101Q9BSB4 218 aa12.63□□□□□ -0.39
PTPRU-207ENST00000492954 WFDC1Q9HC57 220 aa12.63□□□□□ -0.39
PTPRU-207ENST00000492954 ALG5Q9Y673 324 aa12.63□□□□□ -0.39
PTPRU-207ENST00000492954 ZNF324O75467 553 aaPredicted RBP12.62□□□□□ -0.39
PTPRU-207ENST00000492954 RNASE4P34096 147 aaKnown RBP12.62□□□□□ -0.39
PTPRU-207ENST00000492954 EIF3GO75821 320 aaKnown RBP eCLIP12.61□□□□□ -0.39
PTPRU-207ENST00000492954 CRISP2P16562 243 aa12.61□□□□□ -0.39
PTPRU-207ENST00000492954 UBE2L3P68036 154 aaKnown RBP12.61□□□□□ -0.39
PTPRU-207ENST00000492954 TMEM78Q5T7P6 136 aa12.61□□□□□ -0.39
PTPRU-207ENST00000492954 PRR9Q5T870 116 aa12.61□□□□□ -0.39
PTPRU-207ENST00000492954 ZFAND2AQ8N6M9 145 aa12.61□□□□□ -0.39
PTPRU-207ENST00000492954 DNAH17Q9UFH2 4485 aa12.6□□□□□ -0.39
PTPRU-207ENST00000492954 NACAE9PAV3 2078 aa12.6□□□□□ -0.39
PTPRU-207ENST00000492954 GPX1P07203 203 aa12.6□□□□□ -0.39
PTPRU-207ENST00000492954 RANP62826 216 aaKnown RBP12.6□□□□□ -0.39
PTPRU-207ENST00000492954 DAZ2Q13117 558 aaKnown RBP12.6□□□□□ -0.39
PTPRU-207ENST00000492954 OR5I1Q13606 314 aa12.6□□□□□ -0.39
PTPRU-207ENST00000492954 Q8TAT8 98 aa12.6□□□□□ -0.39
PTPRU-207ENST00000492954 GSN-AS1Q9NRJ2 163 aa12.6□□□□□ -0.39
PTPRU-207ENST00000492954 ZNF492Q9P255 531 aa12.6□□□□□ -0.39
PTPRU-207ENST00000492954 PRSS29PA6NIE9 313 aa12.59□□□□□ -0.39
PTPRU-207ENST00000492954 FAM3BP58499 235 aaPredicted RBP12.59□□□□□ -0.39
PTPRU-207ENST00000492954 KHDC3LQ587J8 217 aa12.59□□□□□ -0.39
PTPRU-207ENST00000492954 Q6ZQT7 251 aa12.59□□□□□ -0.39
PTPRU-207ENST00000492954 Q6ZTI0 123 aa12.59□□□□□ -0.39
PTPRU-207ENST00000492954 C11orf72Q8NBR9 251 aa12.59□□□□□ -0.39
PTPRU-207ENST00000492954 LINC00467Q9BRT7 94 aa12.59□□□□□ -0.39
PTPRU-207ENST00000492954 Q9H3A6 140 aa12.59□□□□□ -0.39
PTPRU-207ENST00000492954 TRAV26-1A0A087WT03 109 aa12.58□□□□□ -0.4
PTPRU-207ENST00000492954 A0A1B0GVY2 172 aa12.58□□□□□ -0.4
PTPRU-207ENST00000492954 NMBP08949 121 aa12.58□□□□□ -0.4
PTPRU-207ENST00000492954 HOXA5P20719 270 aa12.58□□□□□ -0.4
PTPRU-207ENST00000492954 TAS2R45P59539 299 aa12.58□□□□□ -0.4
PTPRU-207ENST00000492954 ANXA2RQ3ZCQ2 193 aa12.58□□□□□ -0.4
PTPRU-207ENST00000492954 EIF4E3Q8N5X7 224 aaKnown RBP12.58□□□□□ -0.4
PTPRU-207ENST00000492954 ZNF680Q8NEM1 530 aa12.58□□□□□ -0.4
PTPRU-207ENST00000492954 A0A0J9YY99 117 aa12.57□□□□□ -0.4
PTPRU-207ENST00000492954 PTTG1O95997 202 aa12.57□□□□□ -0.4
PTPRU-207ENST00000492954 M6PRP20645 277 aa12.57□□□□□ -0.4
PTPRU-207ENST00000492954 CSN1S1P47710 185 aa12.57□□□□□ -0.4
PTPRU-207ENST00000492954 ZNF138P52744 262 aa12.57□□□□□ -0.4
PTPRU-207ENST00000492954 LYPD1Q8N2G4 141 aa12.57□□□□□ -0.4
PTPRU-207ENST00000492954 ZNRF2Q8NHG8 242 aa12.57□□□□□ -0.4
PTPRU-207ENST00000492954 GNPNAT1Q96EK6 184 aaPredicted RBP12.57□□□□□ -0.4
PTPRU-207ENST00000492954 TMPRSS5Q9H3S3 457 aa12.57□□□□□ -0.4
PTPRU-207ENST00000492954 PKHD1P08F94 4074 aa12.57□□□□□ -0.4
PTPRU-207ENST00000492954 CCL18P55774 89 aa12.56□□□□□ -0.4
PTPRU-207ENST00000492954 TP53TG3Q9ULZ0 132 aa12.56□□□□□ -0.4
PTPRU-207ENST00000492954 LINC00588Q9Y4M8 146 aa12.56□□□□□ -0.4
PTPRU-207ENST00000492954 KLF12Q9Y4X4 402 aa12.56□□□□□ -0.4
PTPRU-207ENST00000492954 TRGV1A0A0A0MS02 117 aa12.55□□□□□ -0.4
PTPRU-207ENST00000492954 RBAKDNA6NC62 111 aa12.55□□□□□ -0.4
PTPRU-207ENST00000492954 RGS13O14921 159 aa12.55□□□□□ -0.4
PTPRU-207ENST00000492954 TCL1AP56279 114 aa12.55□□□□□ -0.4
PTPRU-207ENST00000492954 RAB2AP61019 212 aa12.55□□□□□ -0.4
PTPRU-207ENST00000492954 ACOT6Q3I5F7 207 aaPredicted RBP12.55□□□□□ -0.4
PTPRU-207ENST00000492954 RXFP4Q8TDU9 374 aa12.55□□□□□ -0.4
PTPRU-207ENST00000492954 HYLS1Q96M11 299 aa12.55□□□□□ -0.4
PTPRU-207ENST00000492954 MED28Q9H204 178 aa12.55□□□□□ -0.4
PTPRU-207ENST00000492954 TRGV2A0A075B6R0 118 aa12.54□□□□□ -0.4
PTPRU-207ENST00000492954 IGHV1OR15-1A0A075B7D0 117 aa12.54□□□□□ -0.4
PTPRU-207ENST00000492954 TRBV7-9A0A0J9YWB2 115 aa12.54□□□□□ -0.4
PTPRU-207ENST00000492954 DIRC3C9JPN6 131 aa12.54□□□□□ -0.4
PTPRU-207ENST00000492954 C1orf134Q5TEV5 83 aa12.54□□□□□ -0.4
PTPRU-207ENST00000492954 SSX7Q7RTT5 188 aa12.54□□□□□ -0.4
PTPRU-207ENST00000492954 OTORQ9NRC9 128 aa12.54□□□□□ -0.4
PTPRU-207ENST00000492954 A0A1W2PPV4 95 aa12.53□□□□□ -0.4
PTPRU-207ENST00000492954 ZNF266Q14584 549 aa12.53□□□□□ -0.4
PTPRU-207ENST00000492954 SOHLH1Q5JUK2 328 aa12.53□□□□□ -0.4
PTPRU-207ENST00000492954 IBA57Q5T440 356 aaKnown RBP12.53□□□□□ -0.4
PTPRU-207ENST00000492954 HERC2O95714 4834 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 539.7 ms