RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 PGPA6NDG6 321 aa9.17□□□□□ -0.94
SEC61A1-206ENST00000491668 PPT1P50897 306 aa9.17□□□□□ -0.94
SEC61A1-206ENST00000491668 FOXI2Q6ZQN5 318 aa9.17□□□□□ -0.94
SEC61A1-206ENST00000491668 ZNF680Q8NEM1 530 aa9.17□□□□□ -0.94
SEC61A1-206ENST00000491668 OR10J6PQ8NGY7 276 aa9.17□□□□□ -0.94
SEC61A1-206ENST00000491668 OTORQ9NRC9 128 aa9.17□□□□□ -0.94
SEC61A1-206ENST00000491668 PPP1R14DQ9NXH3 145 aa9.17□□□□□ -0.94
SEC61A1-206ENST00000491668 RPH3ALQ9UNE2 315 aa9.17□□□□□ -0.94
SEC61A1-206ENST00000491668 DNAH10Q8IVF4 4471 aa9.17□□□□□ -0.94
SEC61A1-206ENST00000491668 ZNF705FA8MVS1 300 aaPredicted RBP9.16□□□□□ -0.94
SEC61A1-206ENST00000491668 M0R3E3 92 aa9.16□□□□□ -0.94
SEC61A1-206ENST00000491668 DUSP14O95147 198 aaKnown RBP9.16□□□□□ -0.94
SEC61A1-206ENST00000491668 IGKV3-20P01619 116 aa9.16□□□□□ -0.94
SEC61A1-206ENST00000491668 SLC25A5P05141 298 aaKnown RBP9.16□□□□□ -0.94
SEC61A1-206ENST00000491668 PRB4P10163 310 aaPredicted RBP9.16□□□□□ -0.94
SEC61A1-206ENST00000491668 SUMO1P63165 101 aaKnown RBP9.16□□□□□ -0.94
SEC61A1-206ENST00000491668 HIST1H1AQ02539 215 aaPredicted RBP9.16□□□□□ -0.94
SEC61A1-206ENST00000491668 CST9LP1Q5W188 147 aa9.16□□□□□ -0.94
SEC61A1-206ENST00000491668 OR4B1Q8NGF8 309 aa9.16□□□□□ -0.94
SEC61A1-206ENST00000491668 RXFP4Q8TDU9 374 aa9.16□□□□□ -0.94
SEC61A1-206ENST00000491668 MRPL53Q96EL3 112 aaKnown RBP9.16□□□□□ -0.94
SEC61A1-206ENST00000491668 GNG13Q9P2W3 67 aa9.16□□□□□ -0.94
SEC61A1-206ENST00000491668 KLK5Q9Y337 293 aaPredicted RBP9.16□□□□□ -0.94
SEC61A1-206ENST00000491668 TRAV1-1A0A0B4J248 108 aa9.15□□□□□ -0.94
SEC61A1-206ENST00000491668 A0A1W2PRE2 83 aa9.15□□□□□ -0.94
SEC61A1-206ENST00000491668 F6UB75 175 aa9.15□□□□□ -0.94
SEC61A1-206ENST00000491668 IFNA1P01562 189 aa9.15□□□□□ -0.94
SEC61A1-206ENST00000491668 ZNF705DP0CH99 300 aaPredicted RBP9.15□□□□□ -0.94
SEC61A1-206ENST00000491668 ZNF705BP0CI00 300 aaPredicted RBP9.15□□□□□ -0.94
SEC61A1-206ENST00000491668 HLA-DRB4P13762 266 aa9.15□□□□□ -0.94
SEC61A1-206ENST00000491668 NUTF2P61970 127 aaKnown RBP9.15□□□□□ -0.94
SEC61A1-206ENST00000491668 OR8A1Q8NGG7 326 aa9.15□□□□□ -0.94
SEC61A1-206ENST00000491668 SUN5Q8TC36 379 aa9.15□□□□□ -0.94
SEC61A1-206ENST00000491668 NKX6-2Q9C056 277 aaPredicted RBP9.15□□□□□ -0.94
SEC61A1-206ENST00000491668 SAV1Q9H4B6 383 aaPredicted RBP9.15□□□□□ -0.94
SEC61A1-206ENST00000491668 XCL2Q9UBD3 114 aa9.15□□□□□ -0.94
SEC61A1-206ENST00000491668 HLA-DRB4X5D2U9 266 aa9.15□□□□□ -0.94
SEC61A1-206ENST00000491668 A0A0J9YX75 114 aa9.14□□□□□ -0.95
SEC61A1-206ENST00000491668 PAGE4O60829 102 aa9.14□□□□□ -0.95
SEC61A1-206ENST00000491668 MIFP14174 115 aa9.14□□□□□ -0.95
SEC61A1-206ENST00000491668 RAB14P61106 215 aa9.14□□□□□ -0.95
SEC61A1-206ENST00000491668 MANBALQ9NQG1 85 aa9.14□□□□□ -0.95
SEC61A1-206ENST00000491668 YTHDF2Q9Y5A9 579 aaKnown RBP9.14□□□□□ -0.95
SEC61A1-206ENST00000491668 FAM74A7A6NL05 159 aa9.13□□□□□ -0.95
SEC61A1-206ENST00000491668 PRAC2D3DTV9 90 aa9.13□□□□□ -0.95
SEC61A1-206ENST00000491668 K7EQM0 130 aa9.13□□□□□ -0.95
SEC61A1-206ENST00000491668 CNN1P51911 297 aaKnown RBP9.13□□□□□ -0.95
SEC61A1-206ENST00000491668 CCL20P78556 96 aa9.13□□□□□ -0.95
SEC61A1-206ENST00000491668 C5orf17Q8NAS9 161 aa9.13□□□□□ -0.95
SEC61A1-206ENST00000491668 CELA1Q9UNI1 258 aa9.13□□□□□ -0.95
SEC61A1-206ENST00000491668 IGKV2-40A0A087WW87 121 aaPredicted RBP9.12□□□□□ -0.95
SEC61A1-206ENST00000491668 GGTLC3B5MD39 225 aa9.12□□□□□ -0.95
SEC61A1-206ENST00000491668 F6UZH7 168 aa9.12□□□□□ -0.95
SEC61A1-206ENST00000491668 IGKV2D-40P01614 121 aaPredicted RBP9.12□□□□□ -0.95
SEC61A1-206ENST00000491668 TMEM78Q5T7P6 136 aa9.12□□□□□ -0.95
SEC61A1-206ENST00000491668 LGALS9CQ6DKI2 356 aa9.12□□□□□ -0.95
SEC61A1-206ENST00000491668 ZNF705AQ6ZN79 300 aaPredicted RBP9.12□□□□□ -0.95
SEC61A1-206ENST00000491668 Q6ZTC4 211 aa9.12□□□□□ -0.95
SEC61A1-206ENST00000491668 GOLT1AQ6ZVE7 132 aa9.12□□□□□ -0.95
SEC61A1-206ENST00000491668 ZNF767PQ75MW2 155 aa9.12□□□□□ -0.95
SEC61A1-206ENST00000491668 PCNPQ8WW12 178 aaKnown RBP9.12□□□□□ -0.95
SEC61A1-206ENST00000491668 EPDR1Q9UM22 224 aa9.12□□□□□ -0.95
SEC61A1-206ENST00000491668 ARL2-SNX15V9GYD0 113 aa9.12□□□□□ -0.95
SEC61A1-206ENST00000491668 DNAH6Q9C0G6 4158 aa9.12□□□□□ -0.95
SEC61A1-206ENST00000491668 DIRC3C9JPN6 131 aa9.11□□□□□ -0.95
SEC61A1-206ENST00000491668 C11orf94C9JXX5 98 aa9.11□□□□□ -0.95
SEC61A1-206ENST00000491668 TAGLN2P37802 199 aaKnown RBP9.11□□□□□ -0.95
SEC61A1-206ENST00000491668 FXYD7P58549 80 aa9.11□□□□□ -0.95
SEC61A1-206ENST00000491668 GNG5P63218 68 aa9.11□□□□□ -0.95
SEC61A1-206ENST00000491668 ERCC8Q13216 396 aa9.11□□□□□ -0.95
SEC61A1-206ENST00000491668 DMRTA1Q5VZB9 504 aa9.11□□□□□ -0.95
SEC61A1-206ENST00000491668 ARL6IP6Q8N6S5 226 aa9.11□□□□□ -0.95
SEC61A1-206ENST00000491668 C2CD4CQ8TF44 421 aa9.11□□□□□ -0.95
SEC61A1-206ENST00000491668 CLUHP3Q96NS8 147 aa9.11□□□□□ -0.95
SEC61A1-206ENST00000491668 SLC35B3Q9H1N7 401 aa9.11□□□□□ -0.95
SEC61A1-206ENST00000491668 APLNQ9ULZ1 77 aa9.11□□□□□ -0.95
SEC61A1-206ENST00000491668 SERTM2A0A1B0GWG4 89 aa9.1□□□□□ -0.95
SEC61A1-206ENST00000491668 TCRAP04437 139 aa9.1□□□□□ -0.95
SEC61A1-206ENST00000491668 ATP5G3P48201 142 aa9.1□□□□□ -0.95
SEC61A1-206ENST00000491668 C12orf74Q32Q52 190 aa9.1□□□□□ -0.95
SEC61A1-206ENST00000491668 CYB561D1Q8N8Q1 229 aa9.1□□□□□ -0.95
SEC61A1-206ENST00000491668 LINC00477Q96M19 166 aa9.1□□□□□ -0.95
SEC61A1-206ENST00000491668 ATG101Q9BSB4 218 aa9.1□□□□□ -0.95
SEC61A1-206ENST00000491668 C1QTNF4Q9BXJ3 329 aa9.1□□□□□ -0.95
SEC61A1-206ENST00000491668 RBAKDNA6NC62 111 aa9.09□□□□□ -0.95
SEC61A1-206ENST00000491668 A8MTW9 85 aa9.09□□□□□ -0.95
SEC61A1-206ENST00000491668 IGLL5B9A064 214 aa9.09□□□□□ -0.95
SEC61A1-206ENST00000491668 NPIPB6E9PJ23 425 aa9.09□□□□□ -0.95
SEC61A1-206ENST00000491668 PEX7O00628 323 aa9.09□□□□□ -0.95
SEC61A1-206ENST00000491668 BCL2P10415 239 aa9.09□□□□□ -0.95
SEC61A1-206ENST00000491668 TSPOP30536 169 aa9.09□□□□□ -0.95
SEC61A1-206ENST00000491668 AMTNQ6UX39 209 aa9.09□□□□□ -0.95
SEC61A1-206ENST00000491668 C9orf47Q6ZRZ4 202 aa9.09□□□□□ -0.95
SEC61A1-206ENST00000491668 HIST1H2BAQ96A08 127 aa9.09□□□□□ -0.95
SEC61A1-206ENST00000491668 VGLL1Q99990 258 aa9.09□□□□□ -0.95
SEC61A1-206ENST00000491668 TXNDC17Q9BRA2 123 aa9.09□□□□□ -0.95
SEC61A1-206ENST00000491668 TCEAL7Q9BRU2 100 aa9.09□□□□□ -0.95
SEC61A1-206ENST00000491668 EIF5A2Q9GZV4 153 aaKnown RBP9.09□□□□□ -0.95
SEC61A1-206ENST00000491668 VAX2Q9UIW0 290 aa9.09□□□□□ -0.95
SEC61A1-206ENST00000491668 AMBPP02760 352 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms