RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 FXYD5Q96DB9 178 aa12.58□□□□□ -0.4
HMGN1-219ENST00000491183 ATG101Q9BSB4 218 aa12.58□□□□□ -0.4
HMGN1-219ENST00000491183 HERC2O95714 4834 aa12.57□□□□□ -0.4
HMGN1-219ENST00000491183 IGKV2-40A0A087WW87 121 aaPredicted RBP12.57□□□□□ -0.4
HMGN1-219ENST00000491183 GAGE12BA1L429 117 aa12.57□□□□□ -0.4
HMGN1-219ENST00000491183 SNURFLB1AK76 121 aa12.57□□□□□ -0.4
HMGN1-219ENST00000491183 SSNA1O43805 119 aa12.57□□□□□ -0.4
HMGN1-219ENST00000491183 GAGE7O76087 117 aa12.57□□□□□ -0.4
HMGN1-219ENST00000491183 IGKV2D-40P01614 121 aaPredicted RBP12.57□□□□□ -0.4
HMGN1-219ENST00000491183 OR10J4P0C629 311 aa12.57□□□□□ -0.4
HMGN1-219ENST00000491183 GAGE12FP0CL80 117 aa12.57□□□□□ -0.4
HMGN1-219ENST00000491183 GAGE12GP0CL81 117 aa12.57□□□□□ -0.4
HMGN1-219ENST00000491183 GAGE12IP0CL82 117 aa12.57□□□□□ -0.4
HMGN1-219ENST00000491183 DEFA1P59665 94 aa12.57□□□□□ -0.4
HMGN1-219ENST00000491183 DEFA3P59666 94 aa12.57□□□□□ -0.4
HMGN1-219ENST00000491183 MRPL32Q9BYC8 188 aaKnown RBP12.57□□□□□ -0.4
HMGN1-219ENST00000491183 AAMDCQ9H7C9 122 aa12.57□□□□□ -0.4
HMGN1-219ENST00000491183 FUT9Q9Y231 359 aa12.57□□□□□ -0.4
HMGN1-219ENST00000491183 HSPB11Q9Y547 144 aa12.57□□□□□ -0.4
HMGN1-219ENST00000491183 CRISP2P16562 243 aa12.56□□□□□ -0.4
HMGN1-219ENST00000491183 HOXA5P20719 270 aa12.56□□□□□ -0.4
HMGN1-219ENST00000491183 BTN1A1Q13410 526 aa12.56□□□□□ -0.4
HMGN1-219ENST00000491183 FAM122CQ6P4D5 195 aa12.56□□□□□ -0.4
HMGN1-219ENST00000491183 ZNRF2Q8NHG8 242 aa12.56□□□□□ -0.4
HMGN1-219ENST00000491183 ZNF503Q96F45 646 aa12.56□□□□□ -0.4
HMGN1-219ENST00000491183 ATP5SQ99766 215 aa12.56□□□□□ -0.4
HMGN1-219ENST00000491183 VGLL1Q99990 258 aa12.56□□□□□ -0.4
HMGN1-219ENST00000491183 PAXXQ9BUH6 204 aa12.56□□□□□ -0.4
HMGN1-219ENST00000491183 KCNIP2Q9NS61 270 aa12.56□□□□□ -0.4
HMGN1-219ENST00000491183 C17orf112F2Z3M2 114 aa12.55□□□□□ -0.4
HMGN1-219ENST00000491183 RNASE4P34096 147 aaKnown RBP12.55□□□□□ -0.4
HMGN1-219ENST00000491183 DAZ2Q13117 558 aaKnown RBP12.55□□□□□ -0.4
HMGN1-219ENST00000491183 OR5I1Q13606 314 aa12.55□□□□□ -0.4
HMGN1-219ENST00000491183 ZFAND2AQ8N6M9 145 aa12.55□□□□□ -0.4
HMGN1-219ENST00000491183 C11orf72Q8NBR9 251 aa12.55□□□□□ -0.4
HMGN1-219ENST00000491183 PHYHIPLQ96FC7 376 aa12.55□□□□□ -0.4
HMGN1-219ENST00000491183 LINC00467Q9BRT7 94 aa12.55□□□□□ -0.4
HMGN1-219ENST00000491183 GSN-AS1Q9NRJ2 163 aa12.55□□□□□ -0.4
HMGN1-219ENST00000491183 LINC00588Q9Y4M8 146 aa12.55□□□□□ -0.4
HMGN1-219ENST00000491183 RPL12P30050 165 aaKnown RBP12.54□□□□□ -0.4
HMGN1-219ENST00000491183 PRR9Q5T870 116 aa12.54□□□□□ -0.4
HMGN1-219ENST00000491183 Q6ZQT7 251 aa12.54□□□□□ -0.4
HMGN1-219ENST00000491183 Q6ZTI0 123 aa12.54□□□□□ -0.4
HMGN1-219ENST00000491183 SMIM3Q9BZL3 60 aa12.54□□□□□ -0.4
HMGN1-219ENST00000491183 ZNF492Q9P255 531 aa12.54□□□□□ -0.4
HMGN1-219ENST00000491183 KIAA1109Q2LD37 5005 aa12.53□□□□□ -0.4
HMGN1-219ENST00000491183 TRAV26-1A0A087WT03 109 aa12.53□□□□□ -0.4
HMGN1-219ENST00000491183 GPX1P07203 203 aa12.53□□□□□ -0.4
HMGN1-219ENST00000491183 NMBP08949 121 aa12.53□□□□□ -0.4
HMGN1-219ENST00000491183 CCL18P55774 89 aa12.53□□□□□ -0.4
HMGN1-219ENST00000491183 ANXA2RQ3ZCQ2 193 aa12.53□□□□□ -0.4
HMGN1-219ENST00000491183 FFAR4Q5NUL3 377 aa12.53□□□□□ -0.4
HMGN1-219ENST00000491183 C1orf134Q5TEV5 83 aa12.53□□□□□ -0.4
HMGN1-219ENST00000491183 GNPNAT1Q96EK6 184 aaPredicted RBP12.53□□□□□ -0.4
HMGN1-219ENST00000491183 WFDC1Q9HC57 220 aa12.53□□□□□ -0.4
HMGN1-219ENST00000491183 MBD2Q9UBB5 411 aa12.53□□□□□ -0.4
HMGN1-219ENST00000491183 A0A0J9YY99 117 aa12.52□□□□□ -0.41
HMGN1-219ENST00000491183 OR7C2O60412 319 aa12.52□□□□□ -0.41
HMGN1-219ENST00000491183 PET100P0DJ07 73 aa12.52□□□□□ -0.41
HMGN1-219ENST00000491183 M6PRP20645 277 aa12.52□□□□□ -0.41
HMGN1-219ENST00000491183 TMEM78Q5T7P6 136 aa12.52□□□□□ -0.41
HMGN1-219ENST00000491183 EIF4E3Q8N5X7 224 aaKnown RBP12.52□□□□□ -0.41
HMGN1-219ENST00000491183 RXFP4Q8TDU9 374 aa12.52□□□□□ -0.41
HMGN1-219ENST00000491183 TMPRSS5Q9H3S3 457 aa12.52□□□□□ -0.41
HMGN1-219ENST00000491183 KLF12Q9Y4X4 402 aa12.52□□□□□ -0.41
HMGN1-219ENST00000491183 NBDYA0A0U1RRE5 68 aa12.51□□□□□ -0.41
HMGN1-219ENST00000491183 EIF3GO75821 320 aaKnown RBP eCLIP12.51□□□□□ -0.41
HMGN1-219ENST00000491183 IFNA5P01569 189 aa12.51□□□□□ -0.41
HMGN1-219ENST00000491183 RANP62826 216 aaKnown RBP12.51□□□□□ -0.41
HMGN1-219ENST00000491183 SOHLH1Q5JUK2 328 aa12.51□□□□□ -0.41
HMGN1-219ENST00000491183 SSX7Q7RTT5 188 aa12.51□□□□□ -0.41
HMGN1-219ENST00000491183 ZNF680Q8NEM1 530 aa12.51□□□□□ -0.41
HMGN1-219ENST00000491183 SCGB1C1Q8TD33 95 aa12.51□□□□□ -0.41
HMGN1-219ENST00000491183 BATF3Q9NR55 127 aa12.51□□□□□ -0.41
HMGN1-219ENST00000491183 TP53TG3Q9ULZ0 132 aa12.51□□□□□ -0.41
HMGN1-219ENST00000491183 PKD1P98161 4303 aa12.51□□□□□ -0.41
HMGN1-219ENST00000491183 ZNF138P52744 262 aa12.5□□□□□ -0.41
HMGN1-219ENST00000491183 LYPD1Q8N2G4 141 aa12.5□□□□□ -0.41
HMGN1-219ENST00000491183 Q8TAT8 98 aa12.5□□□□□ -0.41
HMGN1-219ENST00000491183 KRTAP17-1Q9BYP8 105 aa12.5□□□□□ -0.41
HMGN1-219ENST00000491183 Q9H3A6 140 aa12.5□□□□□ -0.41
HMGN1-219ENST00000491183 H3BNG1 76 aa12.49□□□□□ -0.41
HMGN1-219ENST00000491183 TCL1AP56279 114 aa12.49□□□□□ -0.41
HMGN1-219ENST00000491183 C18orf15Q96N68 181 aa12.49□□□□□ -0.41
HMGN1-219ENST00000491183 ALG5Q9Y673 324 aa12.49□□□□□ -0.41
HMGN1-219ENST00000491183 PKHD1P08F94 4074 aa12.48□□□□□ -0.41
HMGN1-219ENST00000491183 IGHV1OR15-1A0A075B7D0 117 aa12.48□□□□□ -0.41
HMGN1-219ENST00000491183 TRGV1A0A0A0MS02 117 aa12.48□□□□□ -0.41
HMGN1-219ENST00000491183 TRBV7-9A0A0J9YWB2 115 aa12.48□□□□□ -0.41
HMGN1-219ENST00000491183 SPINK4O60575 86 aa12.48□□□□□ -0.41
HMGN1-219ENST00000491183 UBE2L3P68036 154 aaKnown RBP12.48□□□□□ -0.41
HMGN1-219ENST00000491183 ESRGQ1W209 222 aa12.48□□□□□ -0.41
HMGN1-219ENST00000491183 VSIG2Q96IQ7 327 aa12.48□□□□□ -0.41
HMGN1-219ENST00000491183 TRGV2A0A075B6R0 118 aa12.47□□□□□ -0.41
HMGN1-219ENST00000491183 RBAKDNA6NC62 111 aa12.47□□□□□ -0.41
HMGN1-219ENST00000491183 RGS13O14921 159 aa12.47□□□□□ -0.41
HMGN1-219ENST00000491183 CSN1S1P47710 185 aa12.47□□□□□ -0.41
HMGN1-219ENST00000491183 KHDC3LQ587J8 217 aa12.47□□□□□ -0.41
HMGN1-219ENST00000491183 IBA57Q5T440 356 aaKnown RBP12.47□□□□□ -0.41
HMGN1-219ENST00000491183 Q9H8V8 135 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms