RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 FCN2Q15485 313 aa12.34□□□□□ -0.43
SEC13-218ENST00000490283 MED28Q9H204 178 aa12.34□□□□□ -0.43
SEC13-218ENST00000490283 C7orf71A4D174 169 aa12.33□□□□□ -0.44
SEC13-218ENST00000490283 RNF212Q495C1 297 aa12.33□□□□□ -0.44
SEC13-218ENST00000490283 IGKV2-40A0A087WW87 121 aaPredicted RBP12.32□□□□□ -0.44
SEC13-218ENST00000490283 IGKV2D-40P01614 121 aaPredicted RBP12.32□□□□□ -0.44
SEC13-218ENST00000490283 GPX1P07203 203 aa12.32□□□□□ -0.44
SEC13-218ENST00000490283 ACOT6Q3I5F7 207 aaPredicted RBP12.32□□□□□ -0.44
SEC13-218ENST00000490283 C9orf47Q6ZRZ4 202 aa12.32□□□□□ -0.44
SEC13-218ENST00000490283 LYPD1Q8N2G4 141 aa12.32□□□□□ -0.44
SEC13-218ENST00000490283 FXYD5Q96DB9 178 aa12.32□□□□□ -0.44
SEC13-218ENST00000490283 ATG101Q9BSB4 218 aa12.32□□□□□ -0.44
SEC13-218ENST00000490283 AGPAT4-IT1Q9H0P7 198 aa12.32□□□□□ -0.44
SEC13-218ENST00000490283 A0A1W2PPV4 95 aa12.31□□□□□ -0.44
SEC13-218ENST00000490283 NMBP08949 121 aa12.31□□□□□ -0.44
SEC13-218ENST00000490283 RNASE4P34096 147 aaKnown RBP12.31□□□□□ -0.44
SEC13-218ENST00000490283 ZNF680Q8NEM1 530 aa12.31□□□□□ -0.44
SEC13-218ENST00000490283 PHYHIPLQ96FC7 376 aa12.31□□□□□ -0.44
SEC13-218ENST00000490283 KLLNB2CW77 178 aa12.3□□□□□ -0.44
SEC13-218ENST00000490283 NUDT3O95989 172 aa12.3□□□□□ -0.44
SEC13-218ENST00000490283 RANP62826 216 aaKnown RBP12.3□□□□□ -0.44
SEC13-218ENST00000490283 ZNF266Q14584 549 aa12.3□□□□□ -0.44
SEC13-218ENST00000490283 Q9H3A6 140 aa12.3□□□□□ -0.44
SEC13-218ENST00000490283 BIRC6Q9NR09 4857 aa12.3□□□□□ -0.44
SEC13-218ENST00000490283 CRISP2P16562 243 aa12.29□□□□□ -0.44
SEC13-218ENST00000490283 M6PRP20645 277 aa12.29□□□□□ -0.44
SEC13-218ENST00000490283 ZNF138P52744 262 aa12.29□□□□□ -0.44
SEC13-218ENST00000490283 BTN1A1Q13410 526 aa12.29□□□□□ -0.44
SEC13-218ENST00000490283 FAM74A1Q5RGS3 127 aa12.29□□□□□ -0.44
SEC13-218ENST00000490283 LINC00336Q6ZUF6 198 aa12.29□□□□□ -0.44
SEC13-218ENST00000490283 EIF4E3Q8N5X7 224 aaKnown RBP12.29□□□□□ -0.44
SEC13-218ENST00000490283 FAM19A4Q96LR4 140 aa12.29□□□□□ -0.44
SEC13-218ENST00000490283 VGLL1Q99990 258 aa12.29□□□□□ -0.44
SEC13-218ENST00000490283 GAGE12BA1L429 117 aa12.28□□□□□ -0.44
SEC13-218ENST00000490283 RBAKDNA6NC62 111 aa12.28□□□□□ -0.44
SEC13-218ENST00000490283 M0R2N4 97 aa12.28□□□□□ -0.44
SEC13-218ENST00000490283 RGS13O14921 159 aa12.28□□□□□ -0.44
SEC13-218ENST00000490283 GAGE7O76087 117 aa12.28□□□□□ -0.44
SEC13-218ENST00000490283 GAGE12FP0CL80 117 aa12.28□□□□□ -0.44
SEC13-218ENST00000490283 GAGE12GP0CL81 117 aa12.28□□□□□ -0.44
SEC13-218ENST00000490283 GAGE12IP0CL82 117 aa12.28□□□□□ -0.44
SEC13-218ENST00000490283 FAM3BP58499 235 aaPredicted RBP12.28□□□□□ -0.44
SEC13-218ENST00000490283 CD300CQ08708 224 aa12.28□□□□□ -0.44
SEC13-218ENST00000490283 LGALS9BQ3B8N2 356 aa12.28□□□□□ -0.44
SEC13-218ENST00000490283 CMTM2Q8TAZ6 248 aa12.28□□□□□ -0.44
SEC13-218ENST00000490283 RXFP4Q8TDU9 374 aa12.28□□□□□ -0.44
SEC13-218ENST00000490283 ASB13Q8WXK3 278 aa12.28□□□□□ -0.44
SEC13-218ENST00000490283 LINC00467Q9BRT7 94 aa12.28□□□□□ -0.44
SEC13-218ENST00000490283 WFDC1Q9HC57 220 aa12.28□□□□□ -0.44
SEC13-218ENST00000490283 ZNF492Q9P255 531 aa12.28□□□□□ -0.44
SEC13-218ENST00000490283 VPS13DQ5THJ4 4388 aa12.28□□□□□ -0.44
SEC13-218ENST00000490283 IGLV2-18A0A075B6J9 118 aa12.27□□□□□ -0.45
SEC13-218ENST00000490283 TRBV7-9A0A0J9YWB2 115 aa12.27□□□□□ -0.45
SEC13-218ENST00000490283 DAZ2Q13117 558 aaKnown RBP12.27□□□□□ -0.45
SEC13-218ENST00000490283 OR5I1Q13606 314 aa12.27□□□□□ -0.45
SEC13-218ENST00000490283 PQLC2Q6ZP29 291 aa12.27□□□□□ -0.45
SEC13-218ENST00000490283 ZNF503Q96F45 646 aa12.27□□□□□ -0.45
SEC13-218ENST00000490283 DNAH6Q9C0G6 4158 aa12.27□□□□□ -0.45
SEC13-218ENST00000490283 ZNF324O75467 553 aaPredicted RBP12.26□□□□□ -0.45
SEC13-218ENST00000490283 CCL18P55774 89 aa12.26□□□□□ -0.45
SEC13-218ENST00000490283 ANXA2RQ3ZCQ2 193 aa12.26□□□□□ -0.45
SEC13-218ENST00000490283 LINC00612Q8N6U2 182 aa12.26□□□□□ -0.45
SEC13-218ENST00000490283 OR10G4Q8NGN3 311 aa12.26□□□□□ -0.45
SEC13-218ENST00000490283 OR10G9Q8NGN4 311 aa12.26□□□□□ -0.45
SEC13-218ENST00000490283 OR10G7Q8NGN6 311 aa12.26□□□□□ -0.45
SEC13-218ENST00000490283 HYLS1Q96M11 299 aa12.26□□□□□ -0.45
SEC13-218ENST00000490283 AQP10Q96PS8 301 aa12.26□□□□□ -0.45
SEC13-218ENST00000490283 ARPC5LQ9BPX5 153 aa12.26□□□□□ -0.45
SEC13-218ENST00000490283 TRGV2A0A075B6R0 118 aa12.25□□□□□ -0.45
SEC13-218ENST00000490283 GIPP09681 153 aaPredicted RBP12.25□□□□□ -0.45
SEC13-218ENST00000490283 RAB2AP61019 212 aa12.25□□□□□ -0.45
SEC13-218ENST00000490283 ZFAND2AQ8N6M9 145 aa12.25□□□□□ -0.45
SEC13-218ENST00000490283 HSD17B11Q8NBQ5 300 aa12.25□□□□□ -0.45
SEC13-218ENST00000490283 INO80EQ8NBZ0 244 aaPredicted RBP12.25□□□□□ -0.45
SEC13-218ENST00000490283 Q8TAT8 98 aa12.25□□□□□ -0.45
SEC13-218ENST00000490283 GNPNAT1Q96EK6 184 aaPredicted RBP12.25□□□□□ -0.45
SEC13-218ENST00000490283 OTORQ9NRC9 128 aa12.25□□□□□ -0.45
SEC13-218ENST00000490283 GSN-AS1Q9NRJ2 163 aa12.25□□□□□ -0.45
SEC13-218ENST00000490283 IGHV1OR15-1A0A075B7D0 117 aa12.24□□□□□ -0.45
SEC13-218ENST00000490283 SOHLH1Q5JUK2 328 aa12.24□□□□□ -0.45
SEC13-218ENST00000490283 IBA57Q5T440 356 aaKnown RBP12.24□□□□□ -0.45
SEC13-218ENST00000490283 RPH3ALQ9UNE2 315 aa12.24□□□□□ -0.45
SEC13-218ENST00000490283 LENEPQ9Y5L5 61 aa12.24□□□□□ -0.45
SEC13-218ENST00000490283 TRAV26-1A0A087WT03 109 aa12.23□□□□□ -0.45
SEC13-218ENST00000490283 TRGV1A0A0A0MS02 117 aa12.23□□□□□ -0.45
SEC13-218ENST00000490283 PGPA6NDG6 321 aa12.23□□□□□ -0.45
SEC13-218ENST00000490283 DIRC3C9JPN6 131 aa12.23□□□□□ -0.45
SEC13-218ENST00000490283 MBP02144 154 aa12.23□□□□□ -0.45
SEC13-218ENST00000490283 CDC34P49427 236 aaPredicted RBP12.23□□□□□ -0.45
SEC13-218ENST00000490283 RGS21Q2M5E4 152 aa12.23□□□□□ -0.45
SEC13-218ENST00000490283 Q6ZTI0 123 aa12.23□□□□□ -0.45
SEC13-218ENST00000490283 OR2G3Q8NGZ4 309 aa12.23□□□□□ -0.45
SEC13-218ENST00000490283 PSMG3Q9BT73 122 aaPredicted RBP12.23□□□□□ -0.45
SEC13-218ENST00000490283 EIF3GO75821 320 aaKnown RBP eCLIP12.22□□□□□ -0.45
SEC13-218ENST00000490283 TCL1AP56279 114 aa12.22□□□□□ -0.45
SEC13-218ENST00000490283 PRR9Q5T870 116 aa12.22□□□□□ -0.45
SEC13-218ENST00000490283 C11orf72Q8NBR9 251 aa12.22□□□□□ -0.45
SEC13-218ENST00000490283 TMPRSS5Q9H3S3 457 aa12.22□□□□□ -0.45
SEC13-218ENST00000490283 FXYD6-FXYD2A0A087WZ82 144 aa12.21□□□□□ -0.45
SEC13-218ENST00000490283 BORCS7-ASMTA0A0B4J1R7 106 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms