RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 TMEM88Q6PEY1 159 aa6.5□□□□□ -1.37
HDAC6-232ENST00000489053 POM121L12Q8N7R1 296 aa6.5□□□□□ -1.37
HDAC6-232ENST00000489053 ARPC5LQ9BPX5 153 aa6.5□□□□□ -1.37
HDAC6-232ENST00000489053 PYGO2Q9BRQ0 406 aa6.5□□□□□ -1.37
HDAC6-232ENST00000489053 IGKV2-40A0A087WW87 121 aaPredicted RBP6.49□□□□□ -1.37
HDAC6-232ENST00000489053 C7orf71A4D174 169 aa6.49□□□□□ -1.37
HDAC6-232ENST00000489053 RGS13O14921 159 aa6.49□□□□□ -1.37
HDAC6-232ENST00000489053 NUDT3O95989 172 aa6.49□□□□□ -1.37
HDAC6-232ENST00000489053 IGKV2D-40P01614 121 aaPredicted RBP6.49□□□□□ -1.37
HDAC6-232ENST00000489053 AZU1P20160 251 aa6.49□□□□□ -1.37
HDAC6-232ENST00000489053 OR5I1Q13606 314 aa6.49□□□□□ -1.37
HDAC6-232ENST00000489053 RGS21Q2M5E4 152 aa6.49□□□□□ -1.37
HDAC6-232ENST00000489053 ZNF680Q8NEM1 530 aa6.49□□□□□ -1.37
HDAC6-232ENST00000489053 RXFP4Q8TDU9 374 aa6.49□□□□□ -1.37
HDAC6-232ENST00000489053 ASB13Q8WXK3 278 aa6.49□□□□□ -1.37
HDAC6-232ENST00000489053 HYLS1Q96M11 299 aa6.49□□□□□ -1.37
HDAC6-232ENST00000489053 RPH3ALQ9UNE2 315 aa6.49□□□□□ -1.37
HDAC6-232ENST00000489053 HYDINQ4G0P3 5121 aa6.49□□□□□ -1.37
HDAC6-232ENST00000489053 TRGV2A0A075B6R0 118 aa6.48□□□□□ -1.37
HDAC6-232ENST00000489053 NDUFB4O95168 129 aa6.48□□□□□ -1.37
HDAC6-232ENST00000489053 MBP02144 154 aa6.48□□□□□ -1.37
HDAC6-232ENST00000489053 M6PRP20645 277 aa6.48□□□□□ -1.37
HDAC6-232ENST00000489053 ZNF138P52744 262 aa6.48□□□□□ -1.37
HDAC6-232ENST00000489053 FCN2Q15485 313 aa6.48□□□□□ -1.37
HDAC6-232ENST00000489053 SOHLH1Q5JUK2 328 aa6.48□□□□□ -1.37
HDAC6-232ENST00000489053 LYPD1Q8N2G4 141 aa6.48□□□□□ -1.37
HDAC6-232ENST00000489053 HSD17B11Q8NBQ5 300 aa6.48□□□□□ -1.37
HDAC6-232ENST00000489053 OR10G4Q8NGN3 311 aa6.48□□□□□ -1.37
HDAC6-232ENST00000489053 OR10G9Q8NGN4 311 aa6.48□□□□□ -1.37
HDAC6-232ENST00000489053 OR10G7Q8NGN6 311 aa6.48□□□□□ -1.37
HDAC6-232ENST00000489053 FXYD5Q96DB9 178 aa6.48□□□□□ -1.37
HDAC6-232ENST00000489053 PHYHIPLQ96FC7 376 aa6.48□□□□□ -1.37
HDAC6-232ENST00000489053 FAM167A-AS1Q96KT0 104 aa6.48□□□□□ -1.37
HDAC6-232ENST00000489053 DNAH10Q8IVF4 4471 aa6.47□□□□□ -1.37
HDAC6-232ENST00000489053 FXYD6-FXYD2A0A087WZ82 144 aa6.47□□□□□ -1.37
HDAC6-232ENST00000489053 BORCS7-ASMTA0A0B4J1R7 106 aa6.47□□□□□ -1.37
HDAC6-232ENST00000489053 GAGE12BA1L429 117 aa6.47□□□□□ -1.37
HDAC6-232ENST00000489053 GAGE7O76087 117 aa6.47□□□□□ -1.37
HDAC6-232ENST00000489053 NMBP08949 121 aa6.47□□□□□ -1.37
HDAC6-232ENST00000489053 GIPP09681 153 aaPredicted RBP6.47□□□□□ -1.37
HDAC6-232ENST00000489053 GAGE12FP0CL80 117 aa6.47□□□□□ -1.37
HDAC6-232ENST00000489053 GAGE12GP0CL81 117 aa6.47□□□□□ -1.37
HDAC6-232ENST00000489053 GAGE12IP0CL82 117 aa6.47□□□□□ -1.37
HDAC6-232ENST00000489053 CCL18P55774 89 aa6.47□□□□□ -1.37
HDAC6-232ENST00000489053 BTN1A1Q13410 526 aa6.47□□□□□ -1.37
HDAC6-232ENST00000489053 KIR3DS1Q14943 382 aa6.47□□□□□ -1.37
HDAC6-232ENST00000489053 PQLC2Q6ZP29 291 aa6.47□□□□□ -1.37
HDAC6-232ENST00000489053 IQCF2Q8IXL9 164 aa6.47□□□□□ -1.37
HDAC6-232ENST00000489053 EIF4E3Q8N5X7 224 aaKnown RBP6.47□□□□□ -1.37
HDAC6-232ENST00000489053 RNASE8Q8TDE3 154 aaKnown RBP6.47□□□□□ -1.37
HDAC6-232ENST00000489053 AGPAT4-IT1Q9H0P7 198 aa6.47□□□□□ -1.37
HDAC6-232ENST00000489053 Q9H3A6 140 aa6.47□□□□□ -1.37
HDAC6-232ENST00000489053 EPPK1P58107 5090 aaKnown RBP6.46□□□□□ -1.38
HDAC6-232ENST00000489053 TRGV1A0A0A0MS02 117 aa6.46□□□□□ -1.38
HDAC6-232ENST00000489053 K7EQM0 130 aa6.46□□□□□ -1.38
HDAC6-232ENST00000489053 M0R2N4 97 aa6.46□□□□□ -1.38
HDAC6-232ENST00000489053 CDC34P49427 236 aaPredicted RBP6.46□□□□□ -1.38
HDAC6-232ENST00000489053 RAB2AP61019 212 aa6.46□□□□□ -1.38
HDAC6-232ENST00000489053 RNF212Q495C1 297 aa6.46□□□□□ -1.38
HDAC6-232ENST00000489053 C9orf47Q6ZRZ4 202 aa6.46□□□□□ -1.38
HDAC6-232ENST00000489053 Q8TAT8 98 aa6.46□□□□□ -1.38
HDAC6-232ENST00000489053 GNPNAT1Q96EK6 184 aaPredicted RBP6.46□□□□□ -1.38
HDAC6-232ENST00000489053 VGLL1Q99990 258 aa6.46□□□□□ -1.38
HDAC6-232ENST00000489053 NDFIP1Q9BT67 221 aa6.46□□□□□ -1.38
HDAC6-232ENST00000489053 OTORQ9NRC9 128 aa6.46□□□□□ -1.38
HDAC6-232ENST00000489053 KMT2AQ03164 3969 aa6.46□□□□□ -1.38
HDAC6-232ENST00000489053 IGLV2-18A0A075B6J9 118 aa6.45□□□□□ -1.38
HDAC6-232ENST00000489053 IGHV1OR15-1A0A075B7D0 117 aa6.45□□□□□ -1.38
HDAC6-232ENST00000489053 RBAKDNA6NC62 111 aa6.45□□□□□ -1.38
HDAC6-232ENST00000489053 PGPA6NDG6 321 aa6.45□□□□□ -1.38
HDAC6-232ENST00000489053 KLLNB2CW77 178 aa6.45□□□□□ -1.38
HDAC6-232ENST00000489053 CRISP2P16562 243 aa6.45□□□□□ -1.38
HDAC6-232ENST00000489053 FAM3BP58499 235 aaPredicted RBP6.45□□□□□ -1.38
HDAC6-232ENST00000489053 CD300CQ08708 224 aa6.45□□□□□ -1.38
HDAC6-232ENST00000489053 ZNF415Q09FC8 603 aa6.45□□□□□ -1.38
HDAC6-232ENST00000489053 LINC00336Q6ZUF6 198 aa6.45□□□□□ -1.38
HDAC6-232ENST00000489053 OR2T35Q8NGX2 323 aa6.45□□□□□ -1.38
HDAC6-232ENST00000489053 AQP10Q96PS8 301 aa6.45□□□□□ -1.38
HDAC6-232ENST00000489053 ACTR3CQ9C0K3 210 aaPredicted RBP6.45□□□□□ -1.38
HDAC6-232ENST00000489053 WFDC1Q9HC57 220 aa6.45□□□□□ -1.38
HDAC6-232ENST00000489053 GSN-AS1Q9NRJ2 163 aa6.45□□□□□ -1.38
HDAC6-232ENST00000489053 ZNF492Q9P255 531 aa6.45□□□□□ -1.38
HDAC6-232ENST00000489053 NAGKQ9UJ70 344 aa6.45□□□□□ -1.38
HDAC6-232ENST00000489053 DNAH6Q9C0G6 4158 aa6.44□□□□□ -1.38
HDAC6-232ENST00000489053 BIRC6Q9NR09 4857 aa6.44□□□□□ -1.38
HDAC6-232ENST00000489053 TRAV26-1A0A087WT03 109 aa6.44□□□□□ -1.38
HDAC6-232ENST00000489053 TRBV7-9A0A0J9YWB2 115 aa6.44□□□□□ -1.38
HDAC6-232ENST00000489053 PLAC8L1A1L4L8 177 aa6.44□□□□□ -1.38
HDAC6-232ENST00000489053 HMGB3O15347 200 aaKnown RBP6.44□□□□□ -1.38
HDAC6-232ENST00000489053 EIF3GO75821 320 aaKnown RBP eCLIP6.44□□□□□ -1.38
HDAC6-232ENST00000489053 ARL14EPLP0DKL9 152 aa6.44□□□□□ -1.38
HDAC6-232ENST00000489053 DAZ2Q13117 558 aaKnown RBP6.44□□□□□ -1.38
HDAC6-232ENST00000489053 ANXA2RQ3ZCQ2 193 aa6.44□□□□□ -1.38
HDAC6-232ENST00000489053 FAM159AQ6UWV7 190 aa6.44□□□□□ -1.38
HDAC6-232ENST00000489053 GOLT1AQ6ZVE7 132 aa6.44□□□□□ -1.38
HDAC6-232ENST00000489053 PSMG3Q9BT73 122 aaPredicted RBP6.44□□□□□ -1.38
HDAC6-232ENST00000489053 TRGV11A0A075B6L2 103 aa6.43□□□□□ -1.38
HDAC6-232ENST00000489053 A0A0J9YY99 117 aa6.43□□□□□ -1.38
HDAC6-232ENST00000489053 DIRC3C9JPN6 131 aa6.43□□□□□ -1.38
HDAC6-232ENST00000489053 CXorf1O96002 111 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms