RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 OR11H2Q8NH07 326 aa11.63□□□□□ -0.55
HDAC7-224ENST00000488927 TCEAL7Q9BRU2 100 aa11.63□□□□□ -0.55
HDAC7-224ENST00000488927 AGPAT4-IT1Q9H0P7 198 aa11.63□□□□□ -0.55
HDAC7-224ENST00000488927 BOLA1Q9Y3E2 137 aa11.63□□□□□ -0.55
HDAC7-224ENST00000488927 COL7A1Q02388 2944 aa11.63□□□□□ -0.55
HDAC7-224ENST00000488927 NBEAL2Q6ZNJ1 2754 aa11.62□□□□□ -0.55
HDAC7-224ENST00000488927 FAM74A7A6NL05 159 aa11.62□□□□□ -0.55
HDAC7-224ENST00000488927 ZNF705EA8MWA4 302 aaPredicted RBP11.62□□□□□ -0.55
HDAC7-224ENST00000488927 GGTLC3B5MD39 225 aa11.62□□□□□ -0.55
HDAC7-224ENST00000488927 M0R2Z0 102 aa11.62□□□□□ -0.55
HDAC7-224ENST00000488927 NMBP08949 121 aa11.62□□□□□ -0.55
HDAC7-224ENST00000488927 CT45A10P0DMU9 189 aa11.62□□□□□ -0.55
HDAC7-224ENST00000488927 PRB4P10163 310 aaPredicted RBP11.62□□□□□ -0.55
HDAC7-224ENST00000488927 ZNF138P52744 262 aa11.62□□□□□ -0.55
HDAC7-224ENST00000488927 UBE2G2P60604 165 aa11.62□□□□□ -0.55
HDAC7-224ENST00000488927 ERCC8Q13216 396 aa11.62□□□□□ -0.55
HDAC7-224ENST00000488927 ALKAL2Q6UX46 152 aa11.62□□□□□ -0.55
HDAC7-224ENST00000488927 LENEPQ9Y5L5 61 aa11.62□□□□□ -0.55
HDAC7-224ENST00000488927 FBLL1A6NHQ2 334 aaKnown RBP11.61□□□□□ -0.55
HDAC7-224ENST00000488927 IFNA7P01567 189 aa11.61□□□□□ -0.55
HDAC7-224ENST00000488927 TCRAP04437 139 aa11.61□□□□□ -0.55
HDAC7-224ENST00000488927 BLOC1S1P78537 153 aa11.61□□□□□ -0.55
HDAC7-224ENST00000488927 ZNF705AQ6ZN79 300 aaPredicted RBP11.61□□□□□ -0.55
HDAC7-224ENST00000488927 GOLT1AQ6ZVE7 132 aa11.61□□□□□ -0.55
HDAC7-224ENST00000488927 VGLL1Q99990 258 aa11.61□□□□□ -0.55
HDAC7-224ENST00000488927 C20orf144Q9BQM9 153 aa11.61□□□□□ -0.55
HDAC7-224ENST00000488927 ATG101Q9BSB4 218 aa11.61□□□□□ -0.55
HDAC7-224ENST00000488927 ZNF492Q9P255 531 aa11.61□□□□□ -0.55
HDAC7-224ENST00000488927 EPDR1Q9UM22 224 aa11.61□□□□□ -0.55
HDAC7-224ENST00000488927 RPH3ALQ9UNE2 315 aa11.61□□□□□ -0.55
HDAC7-224ENST00000488927 YTHDF2Q9Y5A9 579 aaKnown RBP11.61□□□□□ -0.55
HDAC7-224ENST00000488927 A0A1B0GV50 99 aa11.6□□□□□ -0.55
HDAC7-224ENST00000488927 SMIM9A6NGZ8 99 aa11.6□□□□□ -0.55
HDAC7-224ENST00000488927 F6UZH7 168 aa11.6□□□□□ -0.55
HDAC7-224ENST00000488927 CRXO43186 299 aaPredicted RBP11.6□□□□□ -0.55
HDAC7-224ENST00000488927 MIFP14174 115 aa11.6□□□□□ -0.55
HDAC7-224ENST00000488927 CRISP2P16562 243 aa11.6□□□□□ -0.55
HDAC7-224ENST00000488927 TMEM256Q8N2U0 113 aa11.6□□□□□ -0.55
HDAC7-224ENST00000488927 HIST1H2BAQ96A08 127 aa11.6□□□□□ -0.55
HDAC7-224ENST00000488927 FAM19A4Q96LR4 140 aa11.6□□□□□ -0.55
HDAC7-224ENST00000488927 NEU1Q99519 415 aa11.6□□□□□ -0.55
HDAC7-224ENST00000488927 TMEM208Q9BTX3 173 aa11.6□□□□□ -0.55
HDAC7-224ENST00000488927 MANBALQ9NQG1 85 aa11.6□□□□□ -0.55
HDAC7-224ENST00000488927 TRAV12-2A0A075B6T6 113 aa11.59□□□□□ -0.55
HDAC7-224ENST00000488927 GNG5P63218 68 aa11.59□□□□□ -0.55
HDAC7-224ENST00000488927 CST9LP1Q5W188 147 aa11.59□□□□□ -0.55
HDAC7-224ENST00000488927 CYB561D1Q8N8Q1 229 aa11.59□□□□□ -0.55
HDAC7-224ENST00000488927 KLLNB2CW77 178 aa11.58□□□□□ -0.56
HDAC7-224ENST00000488927 PAGE4O60829 102 aa11.58□□□□□ -0.56
HDAC7-224ENST00000488927 IFNA1P01562 189 aa11.58□□□□□ -0.56
HDAC7-224ENST00000488927 PMS2P11Q13670 270 aa11.58□□□□□ -0.56
HDAC7-224ENST00000488927 TMEM75Q8N9X5 138 aa11.58□□□□□ -0.56
HDAC7-224ENST00000488927 TXNDC17Q9BRA2 123 aa11.58□□□□□ -0.56
HDAC7-224ENST00000488927 C11orf68Q9H3H3 251 aaKnown RBP11.58□□□□□ -0.56
HDAC7-224ENST00000488927 X6R8D5 127 aa11.58□□□□□ -0.56
HDAC7-224ENST00000488927 IGHV3OR16-12A0A075B7B8 117 aa11.57□□□□□ -0.56
HDAC7-224ENST00000488927 PEX7O00628 323 aa11.57□□□□□ -0.56
HDAC7-224ENST00000488927 GPX1P07203 203 aa11.57□□□□□ -0.56
HDAC7-224ENST00000488927 TAGLN2P37802 199 aaKnown RBP11.57□□□□□ -0.56
HDAC7-224ENST00000488927 GFI1BQ5VTD9 330 aa11.57□□□□□ -0.56
HDAC7-224ENST00000488927 CCDC28AQ8IWP9 274 aa11.57□□□□□ -0.56
HDAC7-224ENST00000488927 C1orf158Q8N1D5 194 aa11.57□□□□□ -0.56
HDAC7-224ENST00000488927 WWC2-AS2Q96NR7 200 aa11.57□□□□□ -0.56
HDAC7-224ENST00000488927 NIPSNAP3BQ9BS92 247 aa11.57□□□□□ -0.56
HDAC7-224ENST00000488927 NDFIP1Q9BT67 221 aa11.57□□□□□ -0.56
HDAC7-224ENST00000488927 EDA2RQ9HAV5 297 aa11.57□□□□□ -0.56
HDAC7-224ENST00000488927 GNG13Q9P2W3 67 aa11.57□□□□□ -0.56
HDAC7-224ENST00000488927 C7orf71A4D174 169 aa11.56□□□□□ -0.56
HDAC7-224ENST00000488927 H7BYZ3 331 aa11.56□□□□□ -0.56
HDAC7-224ENST00000488927 TEX261Q6UWH6 196 aa11.56□□□□□ -0.56
HDAC7-224ENST00000488927 Q8NAQ8 132 aa11.56□□□□□ -0.56
HDAC7-224ENST00000488927 Q8TAT8 98 aa11.56□□□□□ -0.56
HDAC7-224ENST00000488927 LINC01587Q99440 93 aa11.56□□□□□ -0.56
HDAC7-224ENST00000488927 TENM3Q9P273 2699 aa11.55□□□□□ -0.56
HDAC7-224ENST00000488927 STAB2Q8WWQ8 2551 aa11.55□□□□□ -0.56
HDAC7-224ENST00000488927 TMEM189A5PLL7 270 aa11.55□□□□□ -0.56
HDAC7-224ENST00000488927 C11orf94C9JXX5 98 aa11.55□□□□□ -0.56
HDAC7-224ENST00000488927 TAS2R60P59551 318 aa11.55□□□□□ -0.56
HDAC7-224ENST00000488927 CCL20P78556 96 aa11.55□□□□□ -0.56
HDAC7-224ENST00000488927 FLI1Q01543 452 aaPredicted RBP11.55□□□□□ -0.56
HDAC7-224ENST00000488927 RRN3P1Q2M238 152 aa11.55□□□□□ -0.56
HDAC7-224ENST00000488927 ZFAND2AQ8N6M9 145 aa11.55□□□□□ -0.56
HDAC7-224ENST00000488927 TRAV8-1A0A0A6YYK1 113 aa11.54□□□□□ -0.56
HDAC7-224ENST00000488927 IGHV4-28A0A0C4DH34 117 aa11.54□□□□□ -0.56
HDAC7-224ENST00000488927 A0A0J9YWU9 116 aa11.54□□□□□ -0.56
HDAC7-224ENST00000488927 J3KRW8 73 aa11.54□□□□□ -0.56
HDAC7-224ENST00000488927 RNASE4P34096 147 aaKnown RBP11.54□□□□□ -0.56
HDAC7-224ENST00000488927 ATP5G3P48201 142 aa11.54□□□□□ -0.56
HDAC7-224ENST00000488927 SAPCD1Q5SSQ6 148 aa11.54□□□□□ -0.56
HDAC7-224ENST00000488927 IL17DQ8TAD2 202 aa11.54□□□□□ -0.56
HDAC7-224ENST00000488927 TREM1Q9NP99 234 aa11.54□□□□□ -0.56
HDAC7-224ENST00000488927 PSG8Q9UQ74 426 aa11.54□□□□□ -0.56
HDAC7-224ENST00000488927 TRAV12-3A0A0B4J271 114 aa11.53□□□□□ -0.56
HDAC7-224ENST00000488927 S100A9P06702 114 aaKnown RBP11.53□□□□□ -0.56
HDAC7-224ENST00000488927 RBMY1A1P0DJD3 496 aaKnown RBP11.53□□□□□ -0.56
HDAC7-224ENST00000488927 RBMY1CP0DJD4 496 aa11.53□□□□□ -0.56
HDAC7-224ENST00000488927 KIR3DS1Q14943 382 aa11.53□□□□□ -0.56
HDAC7-224ENST00000488927 RBMY1FQ15415 496 aaKnown RBP11.53□□□□□ -0.56
HDAC7-224ENST00000488927 LYPD6BQ8NI32 183 aa11.53□□□□□ -0.56
HDAC7-224ENST00000488927 FMC1Q96HJ9 113 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms