RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 AGPAT4-IT1Q9H0P7 198 aa15.76■□□□□ 0.11
PTPN4-211ENST00000488279 DYNC1H1Q14204 4646 aaKnown RBP15.76■□□□□ 0.11
PTPN4-211ENST00000488279 C7orf71A4D174 169 aa15.75■□□□□ 0.11
PTPN4-211ENST00000488279 UPK1BO75841 260 aa15.75■□□□□ 0.11
PTPN4-211ENST00000488279 CYCSP99999 105 aaKnown RBP15.75■□□□□ 0.11
PTPN4-211ENST00000488279 LRRC37A5PQ49AS3 106 aa15.75■□□□□ 0.11
PTPN4-211ENST00000488279 SLC25A2Q9BXI2 301 aa15.75■□□□□ 0.11
PTPN4-211ENST00000488279 OR5AC2Q9NZP5 309 aa15.75■□□□□ 0.11
PTPN4-211ENST00000488279 KLLNB2CW77 178 aa15.74■□□□□ 0.11
PTPN4-211ENST00000488279 PRAF2O60831 178 aa15.74■□□□□ 0.11
PTPN4-211ENST00000488279 HOXA5P20719 270 aa15.74■□□□□ 0.11
PTPN4-211ENST00000488279 ICAM4Q14773 271 aa15.74■□□□□ 0.11
PTPN4-211ENST00000488279 FAM19A4Q96LR4 140 aa15.74■□□□□ 0.11
PTPN4-211ENST00000488279 PCLOQ9Y6V0 5065 aa15.74■□□□□ 0.11
PTPN4-211ENST00000488279 DNAH11Q96DT5 4516 aa15.74■□□□□ 0.11
PTPN4-211ENST00000488279 A0A0J9YY99 117 aa15.73■□□□□ 0.11
PTPN4-211ENST00000488279 ZNF324O75467 553 aaPredicted RBP15.73■□□□□ 0.11
PTPN4-211ENST00000488279 NBEAP1P0C6P0 100 aa15.73■□□□□ 0.11
PTPN4-211ENST00000488279 RNASE4P34096 147 aaKnown RBP15.73■□□□□ 0.11
PTPN4-211ENST00000488279 CD300CQ08708 224 aa15.73■□□□□ 0.11
PTPN4-211ENST00000488279 C9orf47Q6ZRZ4 202 aa15.73■□□□□ 0.11
PTPN4-211ENST00000488279 MIR17HGQ75NE6 70 aa15.73■□□□□ 0.11
PTPN4-211ENST00000488279 C6orf223Q8N319 242 aa15.73■□□□□ 0.11
PTPN4-211ENST00000488279 ZNF680Q8NEM1 530 aa15.73■□□□□ 0.11
PTPN4-211ENST00000488279 FAM167A-AS1Q96KT0 104 aa15.73■□□□□ 0.11
PTPN4-211ENST00000488279 OR51M1Q9H341 326 aa15.73■□□□□ 0.11
PTPN4-211ENST00000488279 Q9H8V8 135 aa15.73■□□□□ 0.11
PTPN4-211ENST00000488279 KCNIP2Q9NS61 270 aa15.73■□□□□ 0.11
PTPN4-211ENST00000488279 INMT-MINDY4F8WBC2 141 aa15.72■□□□□ 0.11
PTPN4-211ENST00000488279 H0YIZ8 118 aa15.72■□□□□ 0.11
PTPN4-211ENST00000488279 H3BNG1 76 aa15.72■□□□□ 0.11
PTPN4-211ENST00000488279 GPX1P07203 203 aa15.72■□□□□ 0.11
PTPN4-211ENST00000488279 NMBP08949 121 aa15.72■□□□□ 0.11
PTPN4-211ENST00000488279 BTN1A1Q13410 526 aa15.72■□□□□ 0.11
PTPN4-211ENST00000488279 TMEM78Q5T7P6 136 aa15.72■□□□□ 0.11
PTPN4-211ENST00000488279 Q6ZTI0 123 aa15.72■□□□□ 0.11
PTPN4-211ENST00000488279 LINC00467Q9BRT7 94 aa15.72■□□□□ 0.11
PTPN4-211ENST00000488279 WDR61Q9GZS3 305 aaKnown RBP15.72■□□□□ 0.11
PTPN4-211ENST00000488279 GSN-AS1Q9NRJ2 163 aa15.72■□□□□ 0.11
PTPN4-211ENST00000488279 TRGV2A0A075B6R0 118 aa15.71■□□□□ 0.11
PTPN4-211ENST00000488279 CRISP2P16562 243 aa15.71■□□□□ 0.11
PTPN4-211ENST00000488279 ANXA2RQ3ZCQ2 193 aa15.71■□□□□ 0.11
PTPN4-211ENST00000488279 FAM122CQ6P4D5 195 aa15.71■□□□□ 0.11
PTPN4-211ENST00000488279 EIF4E3Q8N5X7 224 aaKnown RBP15.71■□□□□ 0.11
PTPN4-211ENST00000488279 MRPL32Q9BYC8 188 aaKnown RBP15.71■□□□□ 0.11
PTPN4-211ENST00000488279 TMPRSS5Q9H3S3 457 aa15.71■□□□□ 0.11
PTPN4-211ENST00000488279 IFITM3Q01628 133 aa15.7■□□□□ 0.1
PTPN4-211ENST00000488279 TNP2Q05952 138 aa15.7■□□□□ 0.1
PTPN4-211ENST00000488279 C11orf72Q8NBR9 251 aa15.7■□□□□ 0.1
PTPN4-211ENST00000488279 PAXXQ9BUH6 204 aa15.7■□□□□ 0.1
PTPN4-211ENST00000488279 IGKV2-40A0A087WW87 121 aaPredicted RBP15.69■□□□□ 0.1
PTPN4-211ENST00000488279 C17orf112F2Z3M2 114 aa15.69■□□□□ 0.1
PTPN4-211ENST00000488279 IGKV2D-40P01614 121 aaPredicted RBP15.69■□□□□ 0.1
PTPN4-211ENST00000488279 FXYD5Q96DB9 178 aa15.69■□□□□ 0.1
PTPN4-211ENST00000488279 VGLL1Q99990 258 aa15.69■□□□□ 0.1
PTPN4-211ENST00000488279 FUT9Q9Y231 359 aa15.69■□□□□ 0.1
PTPN4-211ENST00000488279 TRGV1A0A0A0MS02 117 aa15.68■□□□□ 0.1
PTPN4-211ENST00000488279 OR10J4P0C629 311 aa15.68■□□□□ 0.1
PTPN4-211ENST00000488279 H2BFSP57053 126 aa15.68■□□□□ 0.1
PTPN4-211ENST00000488279 ESRGQ1W209 222 aa15.68■□□□□ 0.1
PTPN4-211ENST00000488279 ZNF575Q86XF7 245 aa15.68■□□□□ 0.1
PTPN4-211ENST00000488279 PPP1R1CQ8WVI7 109 aa15.68■□□□□ 0.1
PTPN4-211ENST00000488279 C18orf15Q96N68 181 aa15.68■□□□□ 0.1
PTPN4-211ENST00000488279 MARVELD1Q9BSK0 173 aa15.68■□□□□ 0.1
PTPN4-211ENST00000488279 ZNF492Q9P255 531 aa15.68■□□□□ 0.1
PTPN4-211ENST00000488279 RGS13O14921 159 aa15.67■□□□□ 0.1
PTPN4-211ENST00000488279 ZFAND2AQ8N6M9 145 aa15.67■□□□□ 0.1
PTPN4-211ENST00000488279 OR7C2O60412 319 aa15.66■□□□□ 0.1
PTPN4-211ENST00000488279 CSN1S1P47710 185 aa15.66■□□□□ 0.1
PTPN4-211ENST00000488279 ZNF138P52744 262 aa15.66■□□□□ 0.1
PTPN4-211ENST00000488279 ATP5SQ99766 215 aa15.66■□□□□ 0.1
PTPN4-211ENST00000488279 UPK3BQ9BT76 320 aa15.66■□□□□ 0.1
PTPN4-211ENST00000488279 KLF12Q9Y4X4 402 aa15.66■□□□□ 0.1
PTPN4-211ENST00000488279 A6NHS1 94 aa15.65■□□□□ 0.1
PTPN4-211ENST00000488279 SSNA1O43805 119 aa15.65■□□□□ 0.1
PTPN4-211ENST00000488279 SPINK4O60575 86 aa15.65■□□□□ 0.1
PTPN4-211ENST00000488279 TCL1AP56279 114 aa15.65■□□□□ 0.1
PTPN4-211ENST00000488279 RANP62826 216 aaKnown RBP15.65■□□□□ 0.1
PTPN4-211ENST00000488279 TTC32Q5I0X7 151 aa15.65■□□□□ 0.1
PTPN4-211ENST00000488279 IBA57Q5T440 356 aaKnown RBP15.65■□□□□ 0.1
PTPN4-211ENST00000488279 PTTG2Q9NZH5 202 aa15.65■□□□□ 0.1
PTPN4-211ENST00000488279 IGHV1OR15-1A0A075B7D0 117 aa15.64■□□□□ 0.09
PTPN4-211ENST00000488279 TRBV7-9A0A0J9YWB2 115 aa15.64■□□□□ 0.09
PTPN4-211ENST00000488279 PET100P0DJ07 73 aa15.64■□□□□ 0.09
PTPN4-211ENST00000488279 PRR9Q5T870 116 aa15.64■□□□□ 0.09
PTPN4-211ENST00000488279 LYPD1Q8N2G4 141 aa15.64■□□□□ 0.09
PTPN4-211ENST00000488279 SCGB1C1Q8TD33 95 aa15.64■□□□□ 0.09
PTPN4-211ENST00000488279 PHYHIPLQ96FC7 376 aa15.64■□□□□ 0.09
PTPN4-211ENST00000488279 VSIG2Q96IQ7 327 aa15.64■□□□□ 0.09
PTPN4-211ENST00000488279 MRPS16Q9Y3D3 137 aaKnown RBP15.64■□□□□ 0.09
PTPN4-211ENST00000488279 MPC2O95563 127 aa15.63■□□□□ 0.09
PTPN4-211ENST00000488279 IFNA5P01569 189 aa15.63■□□□□ 0.09
PTPN4-211ENST00000488279 DEFA1P59665 94 aa15.63■□□□□ 0.09
PTPN4-211ENST00000488279 DEFA3P59666 94 aa15.63■□□□□ 0.09
PTPN4-211ENST00000488279 FFAR4Q5NUL3 377 aa15.63■□□□□ 0.09
PTPN4-211ENST00000488279 ARPC5LQ9BPX5 153 aa15.63■□□□□ 0.09
PTPN4-211ENST00000488279 Q9H3A6 140 aa15.63■□□□□ 0.09
PTPN4-211ENST00000488279 TP53TG3Q9ULZ0 132 aa15.63■□□□□ 0.09
PTPN4-211ENST00000488279 HSPB11Q9Y547 144 aa15.63■□□□□ 0.09
PTPN4-211ENST00000488279 A0A096LPF7 62 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms