RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 GATD1Q8NB37 220 aa2.52□□□□□ -2.01
ECHDC1-217ENST00000488087 PPDPFLQ8WWR9 84 aa2.52□□□□□ -2.01
ECHDC1-217ENST00000488087 FAM131CQ96AQ9 280 aa2.52□□□□□ -2.01
ECHDC1-217ENST00000488087 CLDN23Q96B33 292 aa2.52□□□□□ -2.01
ECHDC1-217ENST00000488087 NPCDR1Q9BY65 106 aa2.52□□□□□ -2.01
ECHDC1-217ENST00000488087 SLC25A39Q9BZJ4 359 aaPredicted RBP2.52□□□□□ -2.01
ECHDC1-217ENST00000488087 CCL28Q9NRJ3 127 aa2.52□□□□□ -2.01
ECHDC1-217ENST00000488087 PSENENQ9NZ42 101 aa2.52□□□□□ -2.01
ECHDC1-217ENST00000488087 TAC3Q9UHF0 121 aa2.52□□□□□ -2.01
ECHDC1-217ENST00000488087 COL4A6Q14031 1691 aa2.52□□□□□ -2.01
ECHDC1-217ENST00000488087 IGKV1-8A0A0C4DH67 115 aa2.51□□□□□ -2.01
ECHDC1-217ENST00000488087 IGKV1-9A0A0C4DH69 117 aa2.51□□□□□ -2.01
ECHDC1-217ENST00000488087 TEX50A0A1B0GTY4 177 aa2.51□□□□□ -2.01
ECHDC1-217ENST00000488087 GGTLC3B5MD39 225 aa2.51□□□□□ -2.01
ECHDC1-217ENST00000488087 IGLL5B9A064 214 aa2.51□□□□□ -2.01
ECHDC1-217ENST00000488087 C4orf51C9J302 202 aa2.51□□□□□ -2.01
ECHDC1-217ENST00000488087 CCL21O00585 134 aa2.51□□□□□ -2.01
ECHDC1-217ENST00000488087 MRPS12O15235 138 aaKnown RBP2.51□□□□□ -2.01
ECHDC1-217ENST00000488087 PGLYRP1O75594 196 aaPredicted RBP2.51□□□□□ -2.01
ECHDC1-217ENST00000488087 APOMO95445 188 aa2.51□□□□□ -2.01
ECHDC1-217ENST00000488087 SLC25A5P05141 298 aaKnown RBP2.51□□□□□ -2.01
ECHDC1-217ENST00000488087 CTLA4P16410 223 aa2.51□□□□□ -2.01
ECHDC1-217ENST00000488087 ATP5G3P48201 142 aa2.51□□□□□ -2.01
ECHDC1-217ENST00000488087 SUB1P53999 127 aaKnown RBP eCLIP2.51□□□□□ -2.01
ECHDC1-217ENST00000488087 TNFAIP6P98066 277 aaPredicted RBP2.51□□□□□ -2.01
ECHDC1-217ENST00000488087 ATP5G2Q06055 141 aa2.51□□□□□ -2.01
ECHDC1-217ENST00000488087 ETDBQ3ZM63 59 aa2.51□□□□□ -2.01
ECHDC1-217ENST00000488087 SPRNQ5BIV9 151 aa2.51□□□□□ -2.01
ECHDC1-217ENST00000488087 CFAP126Q5VTH2 177 aa2.51□□□□□ -2.01
ECHDC1-217ENST00000488087 C22orf39Q6P5X5 142 aa2.51□□□□□ -2.01
ECHDC1-217ENST00000488087 MARCH3Q86UD3 253 aa2.51□□□□□ -2.01
ECHDC1-217ENST00000488087 TMEM61Q8N0U2 210 aa2.51□□□□□ -2.01
ECHDC1-217ENST00000488087 Q8N9L7 120 aa2.51□□□□□ -2.01
ECHDC1-217ENST00000488087 NUP35Q8NFH5 326 aa2.51□□□□□ -2.01
ECHDC1-217ENST00000488087 OR11H6Q8NGC7 330 aa2.51□□□□□ -2.01
ECHDC1-217ENST00000488087 OR2A1Q8NGT9 310 aa2.51□□□□□ -2.01
ECHDC1-217ENST00000488087 OR10J6PQ8NGY7 276 aa2.51□□□□□ -2.01
ECHDC1-217ENST00000488087 OR51H1Q8NH63 302 aa2.51□□□□□ -2.01
ECHDC1-217ENST00000488087 OR13C6PQ8NH95 151 aa2.51□□□□□ -2.01
ECHDC1-217ENST00000488087 MYOZ3Q8TDC0 251 aa2.51□□□□□ -2.01
ECHDC1-217ENST00000488087 C20orf78Q9BR46 151 aa2.51□□□□□ -2.01
ECHDC1-217ENST00000488087 PRTFDC1Q9NRG1 225 aa2.51□□□□□ -2.01
ECHDC1-217ENST00000488087 IDI2-AS1Q9NZ38 188 aa2.51□□□□□ -2.01
ECHDC1-217ENST00000488087 XCL2Q9UBD3 114 aa2.51□□□□□ -2.01
ECHDC1-217ENST00000488087 INSIG2Q9Y5U4 225 aa2.51□□□□□ -2.01
ECHDC1-217ENST00000488087 VWA8A3KMH1 1905 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 UBE2L5PA0A1B0GUS4 154 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 A0A1W2PQD3 144 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 C5orf49A4QMS7 147 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 J3KT08 172 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 IGLV2-8P01709 118 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 ATP5G1P05496 136 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 CRYGDP07320 174 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 ZNF688P0C7X2 276 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 CYBAP13498 195 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 ORM2P19652 201 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 PRTN3P24158 256 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 CSN1S1P47710 185 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 RPL30P62888 115 aaKnown RBP2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 HES1Q14469 280 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 GUSBP1Q15486 140 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 RRN3P1Q2M238 152 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 TTC32Q5I0X7 151 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 IBA57Q5T440 356 aaKnown RBP2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 TSPO2Q5TGU0 170 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 LYRM7Q5U5X0 104 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 AMTNQ6UX39 209 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 ACP7Q6ZNF0 438 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 C6orf201Q7Z4U5 140 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 TEN1Q86WV5 123 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 GAPTQ8N292 157 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 RPRMLQ8N4K4 120 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 WDR31Q8NA23 367 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 NPBQ8NG41 125 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 TMEM158Q8WZ71 300 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 COX14Q96I36 57 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 BMFQ96LC9 184 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 IGF2BP2-AS1Q96M15 143 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 PRELID3AQ96N28 172 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 LINC01587Q99440 93 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 CDX2Q99626 313 aaPredicted RBP2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 SLC25A2Q9BXI2 301 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 IMUPQ9GZP8 106 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 TMEM167BQ9NRX6 74 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 MPC1Q9Y5U8 109 aa2.5□□□□□ -2.01
ECHDC1-217ENST00000488087 EML5Q05BV3 1969 aa2.49□□□□□ -2.01
ECHDC1-217ENST00000488087 TRBV20-1A0A075B6N2 111 aa2.49□□□□□ -2.01
ECHDC1-217ENST00000488087 TCRBV4S1A1TA0A5B7 111 aa2.49□□□□□ -2.01
ECHDC1-217ENST00000488087 H3BSH0 61 aa2.49□□□□□ -2.01
ECHDC1-217ENST00000488087 CCDC179H3BU77 68 aa2.49□□□□□ -2.01
ECHDC1-217ENST00000488087 M0R2P5 195 aa2.49□□□□□ -2.01
ECHDC1-217ENST00000488087 PEX7O00628 323 aa2.49□□□□□ -2.01
ECHDC1-217ENST00000488087 IGKV1D-16P01601 117 aa2.49□□□□□ -2.01
ECHDC1-217ENST00000488087 ORM1P02763 201 aa2.49□□□□□ -2.01
ECHDC1-217ENST00000488087 SCTP09683 121 aa2.49□□□□□ -2.01
ECHDC1-217ENST00000488087 GCHFRP30047 84 aa2.49□□□□□ -2.01
ECHDC1-217ENST00000488087 RPS27P42677 84 aaKnown RBP2.49□□□□□ -2.01
ECHDC1-217ENST00000488087 FOXA3P55318 350 aaPredicted RBP2.49□□□□□ -2.01
ECHDC1-217ENST00000488087 FXYD4P59646 89 aa2.49□□□□□ -2.01
ECHDC1-217ENST00000488087 HBBP68871 147 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms