RNA–Protein interactions for RNA: ENST00000487939.1

PTEN-204, Transcript of phosphatase and tensin homolog, humanhuman

TSL 3

Gene PTEN, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-204ENST00000487939 A0A0J9YY99 117 aa0.07□□□□□ -2.4
PTEN-204ENST00000487939 C3orf85A0A1B0GTC6 90 aa0.07□□□□□ -2.4
PTEN-204ENST00000487939 GLRXP35754 106 aa0.07□□□□□ -2.4
PTEN-204ENST00000487939 TAS2R41P59536 307 aa0.07□□□□□ -2.4
PTEN-204ENST00000487939 SPINK6Q6UWN8 80 aa0.07□□□□□ -2.4
PTEN-204ENST00000487939 ANGPTL5Q86XS5 388 aa0.07□□□□□ -2.4
PTEN-204ENST00000487939 C10orf111Q8N326 155 aa0.07□□□□□ -2.4
PTEN-204ENST00000487939 BORCS8Q96FH0 119 aa0.07□□□□□ -2.4
PTEN-204ENST00000487939 OTORQ9NRC9 128 aa0.07□□□□□ -2.4
PTEN-204ENST00000487939 AFDNP55196 1824 aaKnown RBP0.07□□□□□ -2.4
PTEN-204ENST00000487939 TPRP12270 2363 aaKnown RBP0.07□□□□□ -2.4
PTEN-204ENST00000487939 KIAA1107Q9UPP5 1409 aa0.06□□□□□ -2.4
PTEN-204ENST00000487939 C5orf58C9J3I9 102 aa0.06□□□□□ -2.4
PTEN-204ENST00000487939 FABP2P12104 132 aa0.06□□□□□ -2.4
PTEN-204ENST00000487939 CAV3P56539 151 aa0.06□□□□□ -2.4
PTEN-204ENST00000487939 PHF5AQ7RTV0 110 aaKnown RBP0.06□□□□□ -2.4
PTEN-204ENST00000487939 PRR15Q8IV56 129 aa0.06□□□□□ -2.4
PTEN-204ENST00000487939 NUP35Q8NFH5 326 aa0.06□□□□□ -2.4
PTEN-204ENST00000487939 CARD19Q96LW7 228 aa0.06□□□□□ -2.4
PTEN-204ENST00000487939 AP1S3Q96PC3 154 aa0.06□□□□□ -2.4
PTEN-204ENST00000487939 NABP2Q9BQ15 211 aa0.06□□□□□ -2.4
PTEN-204ENST00000487939 MED11Q9P086 117 aa0.06□□□□□ -2.4
PTEN-204ENST00000487939 STOML2Q9UJZ1 356 aa0.06□□□□□ -2.4
PTEN-204ENST00000487939 LRP1Q07954 4544 aaKnown RBP0.05□□□□□ -2.4
PTEN-204ENST00000487939 A0A1W2PRS3 328 aa0.05□□□□□ -2.4
PTEN-204ENST00000487939 PRORSD1PA6NEY8 169 aa0.05□□□□□ -2.4
PTEN-204ENST00000487939 KPNA4O00629 521 aaPredicted RBP0.05□□□□□ -2.4
PTEN-204ENST00000487939 SULT1C4O75897 302 aa0.05□□□□□ -2.4
PTEN-204ENST00000487939 CD3DP04234 171 aa0.05□□□□□ -2.4
PTEN-204ENST00000487939 RPS3P23396 243 aaKnown RBP eCLIP0.05□□□□□ -2.4
PTEN-204ENST00000487939 BASP1P80723 227 aaKnown RBP0.05□□□□□ -2.4
PTEN-204ENST00000487939 GLYATL3Q5SZD4 288 aa0.05□□□□□ -2.4
PTEN-204ENST00000487939 C5orf17Q8NAS9 161 aa0.05□□□□□ -2.4
PTEN-204ENST00000487939 OR4B1Q8NGF8 309 aa0.05□□□□□ -2.4
PTEN-204ENST00000487939 OR5AK2Q8NH90 309 aa0.05□□□□□ -2.4
PTEN-204ENST00000487939 CLEC2BQ92478 149 aa0.05□□□□□ -2.4
PTEN-204ENST00000487939 PLEKHB2Q96CS7 222 aa0.05□□□□□ -2.4
PTEN-204ENST00000487939 HOPXQ9BPY8 73 aaPredicted RBP0.05□□□□□ -2.4
PTEN-204ENST00000487939 DSPPQ9NZW4 1301 aa0.05□□□□□ -2.4
PTEN-204ENST00000487939 CACNA1HO95180 2353 aa0.04□□□□□ -2.4
PTEN-204ENST00000487939 ESPL1Q14674 2120 aa0.04□□□□□ -2.4
PTEN-204ENST00000487939 H3BQV1 296 aa0.04□□□□□ -2.4
PTEN-204ENST00000487939 TRACP01848 142 aa0.04□□□□□ -2.4
PTEN-204ENST00000487939 SNRPD3P62318 126 aaKnown RBP0.04□□□□□ -2.4
PTEN-204ENST00000487939 CSAG1Q6PB30 78 aa0.04□□□□□ -2.4
PTEN-204ENST00000487939 TMED4Q7Z7H5 227 aa0.04□□□□□ -2.4
PTEN-204ENST00000487939 OR5H6Q8NGV6 325 aa0.04□□□□□ -2.4
PTEN-204ENST00000487939 DYDC1Q8WWB3 177 aa0.04□□□□□ -2.4
PTEN-204ENST00000487939 AP3S1Q92572 193 aa0.04□□□□□ -2.4
PTEN-204ENST00000487939 MYH1P12882 1939 aa0.04□□□□□ -2.4
PTEN-204ENST00000487939 TRAPPC8Q9Y2L5 1435 aa0.04□□□□□ -2.4
PTEN-204ENST00000487939 PIEZO1Q92508 2521 aa0.04□□□□□ -2.4
PTEN-204ENST00000487939 ABCA1O95477 2261 aa0.03□□□□□ -2.4
PTEN-204ENST00000487939 DLC1Q96QB1 1528 aa0.03□□□□□ -2.4
PTEN-204ENST00000487939 TTC28Q96AY4 2481 aa0.03□□□□□ -2.4
PTEN-204ENST00000487939 LOC107984156A0A0G2JMH3 177 aa0.03□□□□□ -2.4
PTEN-204ENST00000487939 TRDV1A0A1B0GX56 115 aa0.03□□□□□ -2.4
PTEN-204ENST00000487939 GABARAPH6UMI1 98 aa0.03□□□□□ -2.4
PTEN-204ENST00000487939 MRPS36P82909 103 aaKnown RBP0.03□□□□□ -2.4
PTEN-204ENST00000487939 XAF1Q6GPH4 301 aa0.03□□□□□ -2.4
PTEN-204ENST00000487939 LYG2Q86SG7 212 aa0.03□□□□□ -2.4
PTEN-204ENST00000487939 ARL17AQ8IVW1 177 aa0.03□□□□□ -2.4
PTEN-204ENST00000487939 STX19Q8N4C7 294 aa0.03□□□□□ -2.4
PTEN-204ENST00000487939 FAM24BQ8N5W8 94 aa0.03□□□□□ -2.4
PTEN-204ENST00000487939 CCL4L1Q8NHW4 92 aa0.03□□□□□ -2.4
PTEN-204ENST00000487939 MCEEQ96PE7 176 aa0.03□□□□□ -2.4
PTEN-204ENST00000487939 LRTM1Q9HBL6 345 aa0.03□□□□□ -2.4
PTEN-204ENST00000487939 UFC1Q9Y3C8 167 aa0.03□□□□□ -2.4
PTEN-204ENST00000487939 EIF3AQ14152 1382 aaKnown RBP0.03□□□□□ -2.4
PTEN-204ENST00000487939 FGD6Q6ZV73 1430 aa0.03□□□□□ -2.41
PTEN-204ENST00000487939 TCOF1Q13428 1488 aaKnown RBP0.03□□□□□ -2.41
PTEN-204ENST00000487939 SYNMO15061 1565 aa0.02□□□□□ -2.41
PTEN-204ENST00000487939 ANK2Q01484 3957 aa0.02□□□□□ -2.41
PTEN-204ENST00000487939 NCOR2Q9Y618 2525 aa0.02□□□□□ -2.41
PTEN-204ENST00000487939 H7BYZ3 331 aa0.02□□□□□ -2.41
PTEN-204ENST00000487939 FXYD1O00168 92 aa0.02□□□□□ -2.41
PTEN-204ENST00000487939 IGHV3-30P01768 117 aa0.02□□□□□ -2.41
PTEN-204ENST00000487939 IGHV3-30-5P0DP03 117 aa0.02□□□□□ -2.41
PTEN-204ENST00000487939 EVI2AP22794 236 aa0.02□□□□□ -2.41
PTEN-204ENST00000487939 TCTAP57738 103 aa0.02□□□□□ -2.41
PTEN-204ENST00000487939 ZNF56Q15929 161 aa0.02□□□□□ -2.41
PTEN-204ENST00000487939 TEX29Q8N6K0 151 aa0.02□□□□□ -2.41
PTEN-204ENST00000487939 GRPEL2Q8TAA5 225 aa0.02□□□□□ -2.41
PTEN-204ENST00000487939 DIRC1Q969H9 104 aa0.02□□□□□ -2.41
PTEN-204ENST00000487939 LINC00208Q96KT6 92 aa0.02□□□□□ -2.41
PTEN-204ENST00000487939 CIB3Q96Q77 187 aaPredicted RBP0.02□□□□□ -2.41
PTEN-204ENST00000487939 FKBP11Q9NYL4 201 aa0.02□□□□□ -2.41
PTEN-204ENST00000487939 IGSF10Q6WRI0 2623 aa0.01□□□□□ -2.41
PTEN-204ENST00000487939 FER1L6Q2WGJ9 1857 aa0.01□□□□□ -2.41
PTEN-204ENST00000487939 BBIP1A8MTZ0 92 aa0.01□□□□□ -2.41
PTEN-204ENST00000487939 SERPINB1P30740 379 aa0.01□□□□□ -2.41
PTEN-204ENST00000487939 NDUFA6P56556 154 aa0.01□□□□□ -2.41
PTEN-204ENST00000487939 RPL37P61927 97 aaKnown RBP0.01□□□□□ -2.41
PTEN-204ENST00000487939 FXYD3Q14802 87 aa0.01□□□□□ -2.41
PTEN-204ENST00000487939 SPINK13Q1W4C9 94 aa0.01□□□□□ -2.41
PTEN-204ENST00000487939 ASB16-AS1Q495Z4 193 aa0.01□□□□□ -2.41
PTEN-204ENST00000487939 C10orf99Q6UWK7 81 aa0.01□□□□□ -2.41
PTEN-204ENST00000487939 C3orf62Q6ZUJ4 267 aa0.01□□□□□ -2.41
PTEN-204ENST00000487939 PRELID3AQ96N28 172 aa0.01□□□□□ -2.41
PTEN-204ENST00000487939 SPRR2GQ9BYE4 73 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms