RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 MRPL32Q9BYC8 188 aaKnown RBP4.08□□□□□ -1.76
CUX1-208ENST00000485792 KRTAP3-1Q9BYR8 98 aa4.08□□□□□ -1.76
CUX1-208ENST00000485792 MED28Q9H204 178 aa4.08□□□□□ -1.76
CUX1-208ENST00000485792 TNFSF18Q9UNG2 199 aa4.08□□□□□ -1.76
CUX1-208ENST00000485792 FUT9Q9Y231 359 aa4.08□□□□□ -1.76
CUX1-208ENST00000485792 TRBV7-9A0A0J9YWB2 115 aa4.07□□□□□ -1.76
CUX1-208ENST00000485792 NUPR2A6NF83 97 aa4.07□□□□□ -1.76
CUX1-208ENST00000485792 KLLNB2CW77 178 aa4.07□□□□□ -1.76
CUX1-208ENST00000485792 SMLR1H3BR10 107 aa4.07□□□□□ -1.76
CUX1-208ENST00000485792 ZNF324O75467 553 aaPredicted RBP4.07□□□□□ -1.76
CUX1-208ENST00000485792 NBEAP1P0C6P0 100 aa4.07□□□□□ -1.76
CUX1-208ENST00000485792 PYYP10082 97 aa4.07□□□□□ -1.76
CUX1-208ENST00000485792 CRISP2P16562 243 aa4.07□□□□□ -1.76
CUX1-208ENST00000485792 TCTAP57738 103 aa4.07□□□□□ -1.76
CUX1-208ENST00000485792 SERF2P84101 59 aa4.07□□□□□ -1.76
CUX1-208ENST00000485792 C12orf74Q32Q52 190 aa4.07□□□□□ -1.76
CUX1-208ENST00000485792 MIR17HGQ75NE6 70 aa4.07□□□□□ -1.76
CUX1-208ENST00000485792 RPP25LQ8N5L8 163 aaKnown RBP4.07□□□□□ -1.76
CUX1-208ENST00000485792 LINC00612Q8N6U2 182 aa4.07□□□□□ -1.76
CUX1-208ENST00000485792 RPUSD4Q96CM3 377 aaKnown RBP4.07□□□□□ -1.76
CUX1-208ENST00000485792 C20orf144Q9BQM9 153 aa4.07□□□□□ -1.76
CUX1-208ENST00000485792 CYTL1Q9NRR1 136 aa4.07□□□□□ -1.76
CUX1-208ENST00000485792 KCNIP2Q9NS61 270 aa4.07□□□□□ -1.76
CUX1-208ENST00000485792 DKK2Q9UBU2 259 aa4.07□□□□□ -1.76
CUX1-208ENST00000485792 PRELID1Q9Y255 219 aa4.07□□□□□ -1.76
CUX1-208ENST00000485792 RYR1P21817 5038 aa4.06□□□□□ -1.76
CUX1-208ENST00000485792 TMEM189A5PLL7 270 aa4.06□□□□□ -1.76
CUX1-208ENST00000485792 RBAKDNA6NC62 111 aa4.06□□□□□ -1.76
CUX1-208ENST00000485792 B5MCH6 92 aa4.06□□□□□ -1.76
CUX1-208ENST00000485792 C11orf94C9JXX5 98 aa4.06□□□□□ -1.76
CUX1-208ENST00000485792 C17orf112F2Z3M2 114 aa4.06□□□□□ -1.76
CUX1-208ENST00000485792 BOLA2-SMG1P6H3BVE0 249 aa4.06□□□□□ -1.76
CUX1-208ENST00000485792 M0R2Z0 102 aa4.06□□□□□ -1.76
CUX1-208ENST00000485792 M0R3E3 92 aa4.06□□□□□ -1.76
CUX1-208ENST00000485792 IGKV3-20P01619 116 aa4.06□□□□□ -1.76
CUX1-208ENST00000485792 SLC25A5P05141 298 aaKnown RBP4.06□□□□□ -1.76
CUX1-208ENST00000485792 CT45A10P0DMU9 189 aa4.06□□□□□ -1.76
CUX1-208ENST00000485792 M6PRP20645 277 aa4.06□□□□□ -1.76
CUX1-208ENST00000485792 CDKN1BP46527 198 aa4.06□□□□□ -1.76
CUX1-208ENST00000485792 NANOS2P60321 138 aaKnown RBP4.06□□□□□ -1.76
CUX1-208ENST00000485792 CD300CQ08708 224 aa4.06□□□□□ -1.76
CUX1-208ENST00000485792 ZNF767PQ75MW2 155 aa4.06□□□□□ -1.76
CUX1-208ENST00000485792 BAP18Q8IXM2 172 aa4.06□□□□□ -1.76
CUX1-208ENST00000485792 TMEM256Q8N2U0 113 aa4.06□□□□□ -1.76
CUX1-208ENST00000485792 OR11H4Q8NGC9 324 aa4.06□□□□□ -1.76
CUX1-208ENST00000485792 OR4B1Q8NGF8 309 aa4.06□□□□□ -1.76
CUX1-208ENST00000485792 C11orf45Q8TAV5 145 aa4.06□□□□□ -1.76
CUX1-208ENST00000485792 PHLDA1Q8WV24 401 aaPredicted RBP4.06□□□□□ -1.76
CUX1-208ENST00000485792 PHYHIPLQ96FC7 376 aa4.06□□□□□ -1.76
CUX1-208ENST00000485792 LINC00477Q96M19 166 aa4.06□□□□□ -1.76
CUX1-208ENST00000485792 LINC00467Q9BRT7 94 aa4.06□□□□□ -1.76
CUX1-208ENST00000485792 MFFQ9GZY8 342 aa4.06□□□□□ -1.76
CUX1-208ENST00000485792 AGPAT4-IT1Q9H0P7 198 aa4.06□□□□□ -1.76
CUX1-208ENST00000485792 OR51M1Q9H341 326 aa4.06□□□□□ -1.76
CUX1-208ENST00000485792 APLNQ9ULZ1 77 aa4.06□□□□□ -1.76
CUX1-208ENST00000485792 APOBP04114 4563 aaKnown RBP4.05□□□□□ -1.76
CUX1-208ENST00000485792 HMSDA8MTL9 139 aa4.05□□□□□ -1.76
CUX1-208ENST00000485792 IFNA5P01569 189 aa4.05□□□□□ -1.76
CUX1-208ENST00000485792 STAG3L2P0CL84 134 aa4.05□□□□□ -1.76
CUX1-208ENST00000485792 STAG3L3P0CL85 134 aa4.05□□□□□ -1.76
CUX1-208ENST00000485792 AZU1P20160 251 aa4.05□□□□□ -1.76
CUX1-208ENST00000485792 ATP6V0CP27449 155 aa4.05□□□□□ -1.76
CUX1-208ENST00000485792 RHOBP62745 196 aa4.05□□□□□ -1.76
CUX1-208ENST00000485792 ZNF266Q14584 549 aa4.05□□□□□ -1.76
CUX1-208ENST00000485792 ZNF345Q14585 488 aa4.05□□□□□ -1.76
CUX1-208ENST00000485792 ZNF726P1Q15940 193 aa4.05□□□□□ -1.76
CUX1-208ENST00000485792 SPINK13Q1W4C9 94 aa4.05□□□□□ -1.76
CUX1-208ENST00000485792 FFAR4Q5NUL3 377 aa4.05□□□□□ -1.76
CUX1-208ENST00000485792 LCE5AQ5TCM9 118 aa4.05□□□□□ -1.76
CUX1-208ENST00000485792 PQLC2Q6ZP29 291 aa4.05□□□□□ -1.76
CUX1-208ENST00000485792 Q6ZTC4 211 aa4.05□□□□□ -1.76
CUX1-208ENST00000485792 EXOC3-AS1Q8N2X6 119 aa4.05□□□□□ -1.76
CUX1-208ENST00000485792 ZFAND2AQ8N6M9 145 aa4.05□□□□□ -1.76
CUX1-208ENST00000485792 ZNF738Q8NE65 137 aa4.05□□□□□ -1.76
CUX1-208ENST00000485792 OR2T35Q8NGX2 323 aa4.05□□□□□ -1.76
CUX1-208ENST00000485792 RNASE8Q8TDE3 154 aaKnown RBP4.05□□□□□ -1.76
CUX1-208ENST00000485792 TMED6Q8WW62 240 aa4.05□□□□□ -1.76
CUX1-208ENST00000485792 LINC00476Q8WZB0 136 aa4.05□□□□□ -1.76
CUX1-208ENST00000485792 PAXXQ9BUH6 204 aa4.05□□□□□ -1.76
CUX1-208ENST00000485792 KRTAP9-3Q9BYQ3 159 aa4.05□□□□□ -1.76
CUX1-208ENST00000485792 SMIM3Q9BZL3 60 aa4.05□□□□□ -1.76
CUX1-208ENST00000485792 SH3BGRL3Q9H299 93 aa4.05□□□□□ -1.76
CUX1-208ENST00000485792 ZNF492Q9P255 531 aa4.05□□□□□ -1.76
CUX1-208ENST00000485792 TP53TG3Q9ULZ0 132 aa4.05□□□□□ -1.76
CUX1-208ENST00000485792 LENEPQ9Y5L5 61 aa4.05□□□□□ -1.76
CUX1-208ENST00000485792 ABCA13Q86UQ4 5058 aa4.05□□□□□ -1.76
CUX1-208ENST00000485792 PCLOQ9Y6V0 5065 aa4.04□□□□□ -1.76
CUX1-208ENST00000485792 LRP1BQ9NZR2 4599 aa4.04□□□□□ -1.76
CUX1-208ENST00000485792 TRAV12-2A0A075B6T6 113 aa4.04□□□□□ -1.76
CUX1-208ENST00000485792 TEX48A0A1B0GUV7 120 aa4.04□□□□□ -1.76
CUX1-208ENST00000485792 TAAR5O14804 337 aa4.04□□□□□ -1.76
CUX1-208ENST00000485792 INSP01308 110 aa4.04□□□□□ -1.76
CUX1-208ENST00000485792 TAS2R60P59551 318 aa4.04□□□□□ -1.76
CUX1-208ENST00000485792 RAB2AP61019 212 aa4.04□□□□□ -1.76
CUX1-208ENST00000485792 HIST1H1AQ02539 215 aaPredicted RBP4.04□□□□□ -1.76
CUX1-208ENST00000485792 PMS2P11Q13670 270 aa4.04□□□□□ -1.76
CUX1-208ENST00000485792 ACOT6Q3I5F7 207 aaPredicted RBP4.04□□□□□ -1.76
CUX1-208ENST00000485792 GFI1BQ5VTD9 330 aa4.04□□□□□ -1.76
CUX1-208ENST00000485792 RPL7L1Q6DKI1 246 aaKnown RBP4.04□□□□□ -1.76
CUX1-208ENST00000485792 LGALS9CQ6DKI2 356 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms