RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 LCN12Q6JVE5 192 aa19.99■□□□□ 0.79
SHOX2-204ENST00000483851 PRNTQ86SH4 94 aa19.99■□□□□ 0.79
SHOX2-204ENST00000483851 RHPN1-AS1Q9BWJ2 59 aa19.99■□□□□ 0.79
SHOX2-204ENST00000483851 BAHCC1Q9P281 2608 aa19.99■□□□□ 0.79
SHOX2-204ENST00000483851 RBAKDNA6NC62 111 aa19.99■□□□□ 0.79
SHOX2-204ENST00000483851 LINC00310P59036 64 aa19.99■□□□□ 0.79
SHOX2-204ENST00000483851 TM4SF20Q53R12 229 aa19.99■□□□□ 0.79
SHOX2-204ENST00000483851 WIPF2Q8TF74 440 aaPredicted RBP19.99■□□□□ 0.79
SHOX2-204ENST00000483851 Q0VG73 95 aa19.98■□□□□ 0.79
SHOX2-204ENST00000483851 C4orf3Q8WVX3 66 aa19.98■□□□□ 0.79
SHOX2-204ENST00000483851 GRIFINA4D1Z8 144 aa19.96■□□□□ 0.79
SHOX2-204ENST00000483851 CRISP2P16562 243 aa19.96■□□□□ 0.79
SHOX2-204ENST00000483851 SAMD13Q5VXD3 122 aa19.96■□□□□ 0.79
SHOX2-204ENST00000483851 IGHV4OR15-8A0A075B7B6 117 aa19.96■□□□□ 0.79
SHOX2-204ENST00000483851 A0A087WW49 117 aa19.96■□□□□ 0.79
SHOX2-204ENST00000483851 SPINK4O60575 86 aa19.96■□□□□ 0.79
SHOX2-204ENST00000483851 SAPCD1Q5SSQ6 148 aa19.96■□□□□ 0.79
SHOX2-204ENST00000483851 RASL11AQ6T310 242 aa19.96■□□□□ 0.79
SHOX2-204ENST00000483851 COX8CQ7Z4L0 72 aa19.96■□□□□ 0.79
SHOX2-204ENST00000483851 HIVEP2P31629 2446 aa19.95■□□□□ 0.78
SHOX2-204ENST00000483851 TRAV8-2A0A0B4J237 113 aa19.95■□□□□ 0.78
SHOX2-204ENST00000483851 C19orf71A6NCJ1 209 aa19.95■□□□□ 0.78
SHOX2-204ENST00000483851 TSKUQ8WUA8 353 aa19.95■□□□□ 0.78
SHOX2-204ENST00000483851 NOTCH2Q04721 2471 aa19.95■□□□□ 0.78
SHOX2-204ENST00000483851 CT83Q5H943 113 aa19.94■□□□□ 0.78
SHOX2-204ENST00000483851 LINC00322Q6ZN03 302 aaPredicted RBP19.94■□□□□ 0.78
SHOX2-204ENST00000483851 NRN1Q9NPD7 142 aa19.94■□□□□ 0.78
SHOX2-204ENST00000483851 NAT8BQ9UHF3 227 aa19.94■□□□□ 0.78
SHOX2-204ENST00000483851 HOXD3P31249 432 aaPredicted RBP19.94■□□□□ 0.78
SHOX2-204ENST00000483851 TCTEX1D4Q5JR98 221 aa19.94■□□□□ 0.78
SHOX2-204ENST00000483851 PRR27Q6MZM9 219 aa19.94■□□□□ 0.78
SHOX2-204ENST00000483851 MRPL54Q6P161 138 aaKnown RBP19.94■□□□□ 0.78
SHOX2-204ENST00000483851 NUP35Q8NFH5 326 aa19.94■□□□□ 0.78
SHOX2-204ENST00000483851 C16orf92Q96LL3 132 aa19.94■□□□□ 0.78
SHOX2-204ENST00000483851 TMEM213A2RRL7 107 aa19.93■□□□□ 0.78
SHOX2-204ENST00000483851 HLA-DQA1P01909 254 aa19.93■□□□□ 0.78
SHOX2-204ENST00000483851 DAZAP1Q96EP5 407 aaKnown RBP19.93■□□□□ 0.78
SHOX2-204ENST00000483851 NDUFA7O95182 113 aa19.92■□□□□ 0.78
SHOX2-204ENST00000483851 HLA-DMBP28068 263 aa19.92■□□□□ 0.78
SHOX2-204ENST00000483851 SOCS3O14543 225 aa19.92■□□□□ 0.78
SHOX2-204ENST00000483851 KLF5Q13887 457 aaPredicted RBP19.92■□□□□ 0.78
SHOX2-204ENST00000483851 IGFL4Q6B9Z1 124 aa19.92■□□□□ 0.78
SHOX2-204ENST00000483851 OR4B1Q8NGF8 309 aa19.92■□□□□ 0.78
SHOX2-204ENST00000483851 IGKV2-40A0A087WW87 121 aaPredicted RBP19.91■□□□□ 0.78
SHOX2-204ENST00000483851 LINC01619G3V211 115 aa19.91■□□□□ 0.78
SHOX2-204ENST00000483851 IGKV2D-40P01614 121 aaPredicted RBP19.91■□□□□ 0.78
SHOX2-204ENST00000483851 ZNF705FA8MVS1 300 aaPredicted RBP19.9■□□□□ 0.78
SHOX2-204ENST00000483851 NPIPB6E9PJ23 425 aa19.9■□□□□ 0.78
SHOX2-204ENST00000483851 P01737 135 aa19.9■□□□□ 0.78
SHOX2-204ENST00000483851 RNF182Q8N6D2 247 aa19.9■□□□□ 0.78
SHOX2-204ENST00000483851 LINC01006Q8NI28 216 aa19.9■□□□□ 0.78
SHOX2-204ENST00000483851 NEU1Q99519 415 aa19.9■□□□□ 0.78
SHOX2-204ENST00000483851 SERF1AO75920 110 aa19.9■□□□□ 0.78
SHOX2-204ENST00000483851 SYNJ2BPP57105 145 aa19.9■□□□□ 0.78
SHOX2-204ENST00000483851 PRR25Q96S07 402 aa19.9■□□□□ 0.78
SHOX2-204ENST00000483851 RPP21Q9H633 154 aaKnown RBP19.9■□□□□ 0.78
SHOX2-204ENST00000483851 PPP1R14DQ9NXH3 145 aa19.9■□□□□ 0.78
SHOX2-204ENST00000483851 F2Z2F3 143 aa19.89■□□□□ 0.77
SHOX2-204ENST00000483851 CT45A10P0DMU9 189 aa19.89■□□□□ 0.77
SHOX2-204ENST00000483851 PAFAH1B2P68402 229 aa19.89■□□□□ 0.77
SHOX2-204ENST00000483851 GDF5OSQ5U4N7 250 aa19.89■□□□□ 0.77
SHOX2-204ENST00000483851 ZC2HC1AQ96GY0 325 aa19.89■□□□□ 0.77
SHOX2-204ENST00000483851 NDFIP1Q9BT67 221 aa19.89■□□□□ 0.77
SHOX2-204ENST00000483851 ANK3Q12955 4377 aaKnown RBP19.88■□□□□ 0.77
SHOX2-204ENST00000483851 RAB4BP61018 213 aa19.88■□□□□ 0.77
SHOX2-204ENST00000483851 OR10J3Q5JRS4 329 aa19.88■□□□□ 0.77
SHOX2-204ENST00000483851 TCF24Q7RTU0 167 aa19.88■□□□□ 0.77
SHOX2-204ENST00000483851 DPF1Q92782 380 aa19.88■□□□□ 0.77
SHOX2-204ENST00000483851 OTOGQ6ZRI0 2925 aa19.88■□□□□ 0.77
SHOX2-204ENST00000483851 A0A1B0GXF2 115 aa19.88■□□□□ 0.77
SHOX2-204ENST00000483851 FAM231BA6NCW3 169 aa19.88■□□□□ 0.77
SHOX2-204ENST00000483851 HIGD1CA8MV81 97 aa19.88■□□□□ 0.77
SHOX2-204ENST00000483851 A8MWL6 223 aa19.88■□□□□ 0.77
SHOX2-204ENST00000483851 VGLL1Q99990 258 aa19.88■□□□□ 0.77
SHOX2-204ENST00000483851 PKIAP61925 76 aa19.87■□□□□ 0.77
SHOX2-204ENST00000483851 RPL11P62913 178 aaKnown RBP19.87■□□□□ 0.77
SHOX2-204ENST00000483851 C9orf47Q6ZRZ4 202 aa19.87■□□□□ 0.77
SHOX2-204ENST00000483851 ATP5L2Q7Z4Y8 100 aa19.87■□□□□ 0.77
SHOX2-204ENST00000483851 OR1N2Q8NGR9 330 aa19.87■□□□□ 0.77
SHOX2-204ENST00000483851 GFRA4Q9GZZ7 299 aa19.87■□□□□ 0.77
SHOX2-204ENST00000483851 OR11H1Q8NG94 326 aa19.86■□□□□ 0.77
SHOX2-204ENST00000483851 PRAC2D3DTV9 90 aa19.86■□□□□ 0.77
SHOX2-204ENST00000483851 M0QZ24 198 aa19.86■□□□□ 0.77
SHOX2-204ENST00000483851 APCSP02743 223 aa19.86■□□□□ 0.77
SHOX2-204ENST00000483851 KIAA1644Q3SXP7 199 aa19.86■□□□□ 0.77
SHOX2-204ENST00000483851 KHDC1LQ5JSQ8 128 aa19.86■□□□□ 0.77
SHOX2-204ENST00000483851 BAGE3Q86Y29 109 aa19.86■□□□□ 0.77
SHOX2-204ENST00000483851 KLHL30-AS1Q8NEE0 82 aa19.86■□□□□ 0.77
SHOX2-204ENST00000483851 C2orf70A6NJV1 201 aa19.85■□□□□ 0.77
SHOX2-204ENST00000483851 OVOL1O14753 267 aa19.85■□□□□ 0.77
SHOX2-204ENST00000483851 SLAQ13239 276 aa19.85■□□□□ 0.77
SHOX2-204ENST00000483851 C18orf65Q6ZTR6 163 aa19.85■□□□□ 0.77
SHOX2-204ENST00000483851 PEMTQ9UBM1 199 aa19.85■□□□□ 0.77
SHOX2-204ENST00000483851 MTORP42345 2549 aa19.85■□□□□ 0.77
SHOX2-204ENST00000483851 ID1P41134 155 aa19.84■□□□□ 0.77
SHOX2-204ENST00000483851 Q71RC1 249 aaPredicted RBP19.84■□□□□ 0.77
SHOX2-204ENST00000483851 GTSF1Q8WW33 167 aa19.84■□□□□ 0.77
SHOX2-204ENST00000483851 TMEM78Q5T7P6 136 aa19.84■□□□□ 0.77
SHOX2-204ENST00000483851 LENEPQ9Y5L5 61 aa19.84■□□□□ 0.77
SHOX2-204ENST00000483851 ZNF738Q8NE65 137 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms