RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 G0S2P27469 103 aa11.18□□□□□ -0.62
CHD3-211ENST00000481999 BATFQ16520 125 aa11.18□□□□□ -0.62
CHD3-211ENST00000481999 SIGLEC15Q6ZMC9 328 aa11.18□□□□□ -0.62
CHD3-211ENST00000481999 ZNF502Q8TBZ5 544 aa11.18□□□□□ -0.62
CHD3-211ENST00000481999 SELENOKQ9Y6D0 94 aa11.18□□□□□ -0.62
CHD3-211ENST00000481999 MTORP42345 2549 aa11.18□□□□□ -0.62
CHD3-211ENST00000481999 NOTCH2Q04721 2471 aa11.18□□□□□ -0.62
CHD3-211ENST00000481999 LOC102724200A0A096LPH7 203 aaPredicted RBP11.18□□□□□ -0.62
CHD3-211ENST00000481999 C20orf202A1L168 122 aa11.18□□□□□ -0.62
CHD3-211ENST00000481999 MRPS12O15235 138 aaKnown RBP11.18□□□□□ -0.62
CHD3-211ENST00000481999 TRBV12-3P01733 135 aa11.18□□□□□ -0.62
CHD3-211ENST00000481999 IGHV4-59P01825 116 aa11.18□□□□□ -0.62
CHD3-211ENST00000481999 ZNF25P17030 456 aaPredicted RBP11.18□□□□□ -0.62
CHD3-211ENST00000481999 Q5PR19 223 aa11.18□□□□□ -0.62
CHD3-211ENST00000481999 Q6ZN92 141 aa11.18□□□□□ -0.62
CHD3-211ENST00000481999 NDFIP1Q9BT67 221 aa11.18□□□□□ -0.62
CHD3-211ENST00000481999 HNRNPA3P51991 378 aaKnown RBP11.17□□□□□ -0.62
CHD3-211ENST00000481999 DEFB112Q30KQ8 113 aa11.17□□□□□ -0.62
CHD3-211ENST00000481999 COL5A1-AS1Q5SY13 56 aa11.17□□□□□ -0.62
CHD3-211ENST00000481999 ATOH7Q8N100 152 aa11.17□□□□□ -0.62
CHD3-211ENST00000481999 KLK15Q9H2R5 256 aa11.17□□□□□ -0.62
CHD3-211ENST00000481999 TRAV9-2A0A087WT02 112 aa11.17□□□□□ -0.62
CHD3-211ENST00000481999 TRAV41A0A0B4J266 112 aa11.17□□□□□ -0.62
CHD3-211ENST00000481999 APOHP02749 345 aaPredicted RBP11.17□□□□□ -0.62
CHD3-211ENST00000481999 ZC2HC1AQ96GY0 325 aa11.17□□□□□ -0.62
CHD3-211ENST00000481999 ZNF48Q96MX3 618 aaPredicted RBP11.17□□□□□ -0.62
CHD3-211ENST00000481999 TMEM70Q9BUB7 260 aa11.17□□□□□ -0.62
CHD3-211ENST00000481999 PSG8Q9UQ74 426 aa11.17□□□□□ -0.62
CHD3-211ENST00000481999 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.16□□□□□ -0.62
CHD3-211ENST00000481999 SLC25A16P16260 332 aa11.16□□□□□ -0.62
CHD3-211ENST00000481999 HLA-DMBP28068 263 aa11.16□□□□□ -0.62
CHD3-211ENST00000481999 PSG3Q16557 428 aa11.16□□□□□ -0.62
CHD3-211ENST00000481999 LINC01356Q8N9X3 169 aa11.16□□□□□ -0.62
CHD3-211ENST00000481999 A0A1B0GUT8 65 aa11.16□□□□□ -0.62
CHD3-211ENST00000481999 IGHV3-11P01762 117 aa11.16□□□□□ -0.62
CHD3-211ENST00000481999 PDE6HQ13956 83 aa11.16□□□□□ -0.62
CHD3-211ENST00000481999 ZNF124Q15973 351 aa11.16□□□□□ -0.62
CHD3-211ENST00000481999 DMRTA1Q5VZB9 504 aa11.16□□□□□ -0.62
CHD3-211ENST00000481999 CYB5R2Q6BCY4 276 aa11.16□□□□□ -0.62
CHD3-211ENST00000481999 C10orf99Q6UWK7 81 aa11.16□□□□□ -0.62
CHD3-211ENST00000481999 A6NDX4 124 aa11.15□□□□□ -0.62
CHD3-211ENST00000481999 ZNF785A8K8V0 405 aa11.15□□□□□ -0.62
CHD3-211ENST00000481999 DEFB113Q30KQ7 82 aa11.15□□□□□ -0.62
CHD3-211ENST00000481999 Q96MF0 132 aa11.15□□□□□ -0.62
CHD3-211ENST00000481999 DUX5Q96PT3 197 aa11.15□□□□□ -0.62
CHD3-211ENST00000481999 TMEM208Q9BTX3 173 aa11.15□□□□□ -0.62
CHD3-211ENST00000481999 IGHV1-24A0A0C4DH33 117 aa11.15□□□□□ -0.62
CHD3-211ENST00000481999 A0A1B0GW15 77 aa11.15□□□□□ -0.62
CHD3-211ENST00000481999 LINC00614P0C842 121 aa11.15□□□□□ -0.62
CHD3-211ENST00000481999 RIGQ13278 110 aa11.15□□□□□ -0.62
CHD3-211ENST00000481999 CLEC5AQ9NY25 188 aa11.15□□□□□ -0.62
CHD3-211ENST00000481999 M0QZ24 198 aa11.14□□□□□ -0.63
CHD3-211ENST00000481999 CRXO43186 299 aaPredicted RBP11.14□□□□□ -0.63
CHD3-211ENST00000481999 DSCR9P59020 149 aa11.14□□□□□ -0.63
CHD3-211ENST00000481999 MAJINQ3KP22 176 aa11.14□□□□□ -0.63
CHD3-211ENST00000481999 Q6AWC8 147 aa11.14□□□□□ -0.63
CHD3-211ENST00000481999 AAMDCQ9H7C9 122 aa11.14□□□□□ -0.63
CHD3-211ENST00000481999 LAMTOR2Q9Y2Q5 125 aa11.14□□□□□ -0.63
CHD3-211ENST00000481999 SMAD5-AS1Q9Y6J3 95 aa11.14□□□□□ -0.63
CHD3-211ENST00000481999 DLEU1O43261 78 aa11.14□□□□□ -0.63
CHD3-211ENST00000481999 TRGV3P03979 118 aa11.14□□□□□ -0.63
CHD3-211ENST00000481999 OR5AL1P0C617 328 aa11.14□□□□□ -0.63
CHD3-211ENST00000481999 GAGE1Q13065 139 aa11.14□□□□□ -0.63
CHD3-211ENST00000481999 C19orf54Q5BKX5 351 aa11.14□□□□□ -0.63
CHD3-211ENST00000481999 ZFAND3Q9H8U3 227 aa11.14□□□□□ -0.63
CHD3-211ENST00000481999 CLPSL1A2RUU4 121 aa11.13□□□□□ -0.63
CHD3-211ENST00000481999 LEPROTL1O95214 131 aa11.13□□□□□ -0.63
CHD3-211ENST00000481999 IGHV4-31P0DP07 118 aa11.13□□□□□ -0.63
CHD3-211ENST00000481999 IL17RELQ6ZVW7 336 aa11.13□□□□□ -0.63
CHD3-211ENST00000481999 KRTAP1-3Q8IUG1 177 aa11.13□□□□□ -0.63
CHD3-211ENST00000481999 MRPS16Q9Y3D3 137 aaKnown RBP11.13□□□□□ -0.63
CHD3-211ENST00000481999 SERTM2A0A1B0GWG4 89 aa11.13□□□□□ -0.63
CHD3-211ENST00000481999 CT45A10P0DMU9 189 aa11.13□□□□□ -0.63
CHD3-211ENST00000481999 TSPOP30536 169 aa11.13□□□□□ -0.63
CHD3-211ENST00000481999 GATD1Q8NB37 220 aa11.13□□□□□ -0.63
CHD3-211ENST00000481999 SYS1-DBNDD2H3BUS1 97 aa11.12□□□□□ -0.63
CHD3-211ENST00000481999 SCGB2A1O75556 95 aa11.12□□□□□ -0.63
CHD3-211ENST00000481999 ARMS2P0C7Q2 107 aa11.12□□□□□ -0.63
CHD3-211ENST00000481999 CSN1S1P47710 185 aa11.12□□□□□ -0.63
CHD3-211ENST00000481999 RABAC1Q9UI14 185 aa11.12□□□□□ -0.63
CHD3-211ENST00000481999 IGLL1P15814 213 aa11.12□□□□□ -0.63
CHD3-211ENST00000481999 UNQ9165/PRO28630Q6UXU0 137 aa11.12□□□□□ -0.63
CHD3-211ENST00000481999 ARL6IP6Q8N6S5 226 aa11.12□□□□□ -0.63
CHD3-211ENST00000481999 WFDC11Q8NEX6 87 aa11.12□□□□□ -0.63
CHD3-211ENST00000481999 IGHG2P01859 326 aa11.11□□□□□ -0.63
CHD3-211ENST00000481999 PPIFP30405 207 aaKnown RBP11.11□□□□□ -0.63
CHD3-211ENST00000481999 CRIP1P50238 77 aa11.11□□□□□ -0.63
CHD3-211ENST00000481999 PSG9Q00887 426 aa11.11□□□□□ -0.63
CHD3-211ENST00000481999 SPATA12Q7Z6I5 190 aa11.11□□□□□ -0.63
CHD3-211ENST00000481999 NIPBLQ6KC79 2804 aaeCLIP11.11□□□□□ -0.63
CHD3-211ENST00000481999 IGKV2-40A0A087WW87 121 aaPredicted RBP11.11□□□□□ -0.63
CHD3-211ENST00000481999 OR4C46A6NHA9 309 aa11.11□□□□□ -0.63
CHD3-211ENST00000481999 IGKV2D-40P01614 121 aaPredicted RBP11.11□□□□□ -0.63
CHD3-211ENST00000481999 RPL7P18124 248 aaKnown RBP11.11□□□□□ -0.63
CHD3-211ENST00000481999 ATP5G2Q06055 141 aa11.11□□□□□ -0.63
CHD3-211ENST00000481999 RNF182Q8N6D2 247 aa11.11□□□□□ -0.63
CHD3-211ENST00000481999 GOLT1BQ9Y3E0 138 aa11.11□□□□□ -0.63
CHD3-211ENST00000481999 SETXQ7Z333 2677 aaKnown RBP11.1□□□□□ -0.63
CHD3-211ENST00000481999 PF4V1P10720 104 aa11.1□□□□□ -0.63
CHD3-211ENST00000481999 EEF1AKMT3Q96AZ1 226 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms