RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 CDKN1BP46527 198 aa14.99□□□□□ -0.01
CCM2-214ENST00000481194 EMP1P54849 157 aa14.99□□□□□ -0.01
CCM2-214ENST00000481194 C9orf66Q5T8R8 295 aa14.99□□□□□ -0.01
CCM2-214ENST00000481194 SPTAN1Q13813 2472 aaKnown RBP14.99□□□□□ -0.01
CCM2-214ENST00000481194 LTAP01374 205 aa14.99□□□□□ -0.01
CCM2-214ENST00000481194 PCSK5Q92824 1860 aa14.99□□□□□ -0.01
CCM2-214ENST00000481194 DSCAMO60469 2012 aa14.99□□□□□ -0.01
CCM2-214ENST00000481194 IGF2RP11717 2491 aa14.99□□□□□ -0.01
CCM2-214ENST00000481194 APOC4P55056 127 aa14.99□□□□□ -0.01
CCM2-214ENST00000481194 Q8N6K4 173 aa14.99□□□□□ -0.01
CCM2-214ENST00000481194 TRAV25A0A0B4J276 109 aa14.99□□□□□ -0.01
CCM2-214ENST00000481194 C2orf88Q9BSF0 95 aa14.99□□□□□ -0.01
CCM2-214ENST00000481194 PRADC1Q9BSG0 188 aa14.98□□□□□ -0.01
CCM2-214ENST00000481194 PRSS46E5RG02 174 aa14.98□□□□□ -0.01
CCM2-214ENST00000481194 HOXA5P20719 270 aa14.98□□□□□ -0.01
CCM2-214ENST00000481194 WNK2Q9Y3S1 2297 aa14.98□□□□□ -0.01
CCM2-214ENST00000481194 CXCL1P09341 107 aa14.98□□□□□ -0.01
CCM2-214ENST00000481194 PATE2Q6UY27 113 aa14.98□□□□□ -0.01
CCM2-214ENST00000481194 SCGB3A1Q96QR1 104 aa14.98□□□□□ -0.01
CCM2-214ENST00000481194 COL5A1-AS1Q5SY13 56 aa14.98□□□□□ -0.01
CCM2-214ENST00000481194 BUB3O43684 328 aa14.97□□□□□ -0.01
CCM2-214ENST00000481194 FAM208BQ5VWN6 2430 aa14.97□□□□□ -0.01
CCM2-214ENST00000481194 TMEM238LA0A1B0GVL6 79 aa14.97□□□□□ -0.01
CCM2-214ENST00000481194 A6NJY4 79 aa14.97□□□□□ -0.01
CCM2-214ENST00000481194 C8orf49Q96NF6 230 aa14.97□□□□□ -0.01
CCM2-214ENST00000481194 A0A087X0K7 114 aa14.96□□□□□ -0.01
CCM2-214ENST00000481194 IGHV1OR15-1A0A075B7D0 117 aa14.96□□□□□ -0.01
CCM2-214ENST00000481194 LINC00614P0C842 121 aa14.96□□□□□ -0.01
CCM2-214ENST00000481194 NMUP48645 174 aa14.96□□□□□ -0.01
CCM2-214ENST00000481194 HTTP42858 3142 aa14.96□□□□□ -0.02
CCM2-214ENST00000481194 HBDP02042 147 aa14.96□□□□□ -0.02
CCM2-214ENST00000481194 RPL24P83731 157 aaKnown RBP14.96□□□□□ -0.02
CCM2-214ENST00000481194 PMCHL2Q9BQD1 86 aa14.96□□□□□ -0.02
CCM2-214ENST00000481194 RHODO00212 210 aa14.95□□□□□ -0.02
CCM2-214ENST00000481194 MS4A6AQ9H2W1 248 aa14.95□□□□□ -0.02
CCM2-214ENST00000481194 FXYD7P58549 80 aa14.95□□□□□ -0.02
CCM2-214ENST00000481194 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.95□□□□□ -0.02
CCM2-214ENST00000481194 GEMIN7Q9H840 131 aaKnown RBP14.95□□□□□ -0.02
CCM2-214ENST00000481194 IGHV4OR15-8A0A075B7B6 117 aa14.95□□□□□ -0.02
CCM2-214ENST00000481194 A0A087WW49 117 aa14.95□□□□□ -0.02
CCM2-214ENST00000481194 ALKBH7Q9BT30 221 aaPredicted RBP14.94□□□□□ -0.02
CCM2-214ENST00000481194 KLK15Q9H2R5 256 aa14.94□□□□□ -0.02
CCM2-214ENST00000481194 HIST1H2BKO60814 126 aa14.94□□□□□ -0.02
CCM2-214ENST00000481194 SERF1AO75920 110 aa14.94□□□□□ -0.02
CCM2-214ENST00000481194 HIST1H2BJP06899 126 aa14.94□□□□□ -0.02
CCM2-214ENST00000481194 HIST1H2BOP23527 126 aa14.94□□□□□ -0.02
CCM2-214ENST00000481194 HIST1H2BBP33778 126 aa14.94□□□□□ -0.02
CCM2-214ENST00000481194 HIST1H2BDP58876 126 aa14.94□□□□□ -0.02
CCM2-214ENST00000481194 HIST1H2BCP62807 126 aa14.94□□□□□ -0.02
CCM2-214ENST00000481194 HIST2H2BEQ16778 126 aa14.94□□□□□ -0.02
CCM2-214ENST00000481194 SPATA45Q537H7 98 aa14.94□□□□□ -0.02
CCM2-214ENST00000481194 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.94□□□□□ -0.02
CCM2-214ENST00000481194 RNF152Q8N8N0 203 aa14.94□□□□□ -0.02
CCM2-214ENST00000481194 HIST1H2BHQ93079 126 aa14.94□□□□□ -0.02
CCM2-214ENST00000481194 HIST1H2BNQ99877 126 aa14.94□□□□□ -0.02
CCM2-214ENST00000481194 HIST1H2BMQ99879 126 aa14.94□□□□□ -0.02
CCM2-214ENST00000481194 SLURP1P55000 103 aa14.94□□□□□ -0.02
CCM2-214ENST00000481194 CYSLTR1Q9Y271 337 aa14.94□□□□□ -0.02
CCM2-214ENST00000481194 FAM167A-AS1Q96KT0 104 aa14.94□□□□□ -0.02
CCM2-214ENST00000481194 RNF224P0DH78 156 aa14.93□□□□□ -0.02
CCM2-214ENST00000481194 COPS9Q8WXC6 57 aa14.93□□□□□ -0.02
CCM2-214ENST00000481194 UQCR10Q9UDW1 63 aa14.93□□□□□ -0.02
CCM2-214ENST00000481194 TRGV1A0A0A0MS02 117 aa14.93□□□□□ -0.02
CCM2-214ENST00000481194 ZNF25P17030 456 aaPredicted RBP14.93□□□□□ -0.02
CCM2-214ENST00000481194 MRAP2Q96G30 205 aa14.93□□□□□ -0.02
CCM2-214ENST00000481194 SMIM27A0A1W2PRY6 76 aa14.93□□□□□ -0.02
CCM2-214ENST00000481194 ARMS2P0C7Q2 107 aa14.93□□□□□ -0.02
CCM2-214ENST00000481194 SPINK13Q1W4C9 94 aa14.93□□□□□ -0.02
CCM2-214ENST00000481194 ZNF256Q9Y2P7 627 aaPredicted RBP14.93□□□□□ -0.02
CCM2-214ENST00000481194 IGKV1OR2-108A0A075B7D4 117 aa14.92□□□□□ -0.02
CCM2-214ENST00000481194 SRSF2Q01130 221 aaKnown RBP14.92□□□□□ -0.02
CCM2-214ENST00000481194 V9GYV3 84 aa14.92□□□□□ -0.02
CCM2-214ENST00000481194 COTL1Q14019 142 aa14.92□□□□□ -0.02
CCM2-214ENST00000481194 IFI27P40305 119 aaPredicted RBP14.92□□□□□ -0.02
CCM2-214ENST00000481194 ERASQ7Z444 233 aa14.92□□□□□ -0.02
CCM2-214ENST00000481194 TMEM262E9PQX1 116 aa14.92□□□□□ -0.02
CCM2-214ENST00000481194 ZNF324O75467 553 aaPredicted RBP14.92□□□□□ -0.02
CCM2-214ENST00000481194 TMEM256Q8N2U0 113 aa14.92□□□□□ -0.02
CCM2-214ENST00000481194 RPL36AP83881 106 aaKnown RBP14.91□□□□□ -0.02
CCM2-214ENST00000481194 RPL36ALQ969Q0 106 aaKnown RBP14.91□□□□□ -0.02
CCM2-214ENST00000481194 C2orf70A6NJV1 201 aa14.91□□□□□ -0.02
CCM2-214ENST00000481194 BBC3Q96PG8 261 aaPredicted RBP14.91□□□□□ -0.02
CCM2-214ENST00000481194 A0A1W2PPR1 153 aa14.91□□□□□ -0.02
CCM2-214ENST00000481194 MIEN1Q9BRT3 115 aa14.91□□□□□ -0.02
CCM2-214ENST00000481194 IGKV1D-37A0A075B6S9 117 aa14.91□□□□□ -0.02
CCM2-214ENST00000481194 D6R8Y8 96 aa14.91□□□□□ -0.02
CCM2-214ENST00000481194 LGALS3P17931 250 aaKnown RBP14.91□□□□□ -0.02
CCM2-214ENST00000481194 DEFB136Q30KP8 78 aa14.91□□□□□ -0.02
CCM2-214ENST00000481194 ZNF295-AS1Q8N0V1 137 aa14.91□□□□□ -0.02
CCM2-214ENST00000481194 VGLL1Q99990 258 aa14.91□□□□□ -0.02
CCM2-214ENST00000481194 TRBV6-1A0A0K0K1D8 114 aa14.9□□□□□ -0.02
CCM2-214ENST00000481194 MORN3Q6PF18 240 aaPredicted RBP14.9□□□□□ -0.02
CCM2-214ENST00000481194 SPXQ9BT56 116 aa14.9□□□□□ -0.02
CCM2-214ENST00000481194 H3BRM9 83 aa14.9□□□□□ -0.02
CCM2-214ENST00000481194 OR2K2Q8NGT1 345 aa14.9□□□□□ -0.02
CCM2-214ENST00000481194 ZC2HC1AQ96GY0 325 aa14.9□□□□□ -0.02
CCM2-214ENST00000481194 LAGE3Q14657 143 aa14.9□□□□□ -0.02
CCM2-214ENST00000481194 C17orf77Q96MU5 243 aa14.9□□□□□ -0.02
CCM2-214ENST00000481194 MRPL36Q9P0J6 103 aaKnown RBP14.9□□□□□ -0.02
CCM2-214ENST00000481194 TYMSP04818 313 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 234.8 ms