RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 CCDC28AQ8IWP9 274 aa3.69□□□□□ -1.82
HDAC6-223ENST00000480525 TMEM75Q8N9X5 138 aa3.69□□□□□ -1.82
HDAC6-223ENST00000480525 TMEM263Q8WUH6 116 aaKnown RBP3.69□□□□□ -1.82
HDAC6-223ENST00000480525 LINC00052Q96N35 136 aa3.69□□□□□ -1.82
HDAC6-223ENST00000480525 RARRES2Q99969 163 aa3.69□□□□□ -1.82
HDAC6-223ENST00000480525 ATG101Q9BSB4 218 aa3.69□□□□□ -1.82
HDAC6-223ENST00000480525 ZNF471Q9BX82 626 aaPredicted RBP3.69□□□□□ -1.82
HDAC6-223ENST00000480525 SH3BGRL3Q9H299 93 aa3.69□□□□□ -1.82
HDAC6-223ENST00000480525 Q9H3A6 140 aa3.69□□□□□ -1.82
HDAC6-223ENST00000480525 ZNF492Q9P255 531 aa3.69□□□□□ -1.82
HDAC6-223ENST00000480525 KLF12Q9Y4X4 402 aa3.69□□□□□ -1.82
HDAC6-223ENST00000480525 X6R8D5 127 aa3.69□□□□□ -1.82
HDAC6-223ENST00000480525 CSMD3Q7Z407 3707 aa3.69□□□□□ -1.82
HDAC6-223ENST00000480525 MAP1LC3B2A6NCE7 125 aa3.68□□□□□ -1.82
HDAC6-223ENST00000480525 KNCNA6PVL3 124 aa3.68□□□□□ -1.82
HDAC6-223ENST00000480525 LYRM9A8MSI8 78 aa3.68□□□□□ -1.82
HDAC6-223ENST00000480525 F6UZH7 168 aa3.68□□□□□ -1.82
HDAC6-223ENST00000480525 TCRAP04437 139 aa3.68□□□□□ -1.82
HDAC6-223ENST00000480525 OR10J4P0C629 311 aa3.68□□□□□ -1.82
HDAC6-223ENST00000480525 ZNF138P52744 262 aa3.68□□□□□ -1.82
HDAC6-223ENST00000480525 ICAM4Q14773 271 aa3.68□□□□□ -1.82
HDAC6-223ENST00000480525 ZNF726P1Q15940 193 aa3.68□□□□□ -1.82
HDAC6-223ENST00000480525 ZNF124Q15973 351 aa3.68□□□□□ -1.82
HDAC6-223ENST00000480525 SAPCD1Q5SSQ6 148 aa3.68□□□□□ -1.82
HDAC6-223ENST00000480525 FAM122CQ6P4D5 195 aa3.68□□□□□ -1.82
HDAC6-223ENST00000480525 RNF182Q8N6D2 247 aa3.68□□□□□ -1.82
HDAC6-223ENST00000480525 CYB561D1Q8N8Q1 229 aa3.68□□□□□ -1.82
HDAC6-223ENST00000480525 ZNF680Q8NEM1 530 aa3.68□□□□□ -1.82
HDAC6-223ENST00000480525 OR11H2Q8NH07 326 aa3.68□□□□□ -1.82
HDAC6-223ENST00000480525 MUC7Q8TAX7 377 aa3.68□□□□□ -1.82
HDAC6-223ENST00000480525 CMTM2Q8TAZ6 248 aa3.68□□□□□ -1.82
HDAC6-223ENST00000480525 C16orf74Q96GX8 76 aa3.68□□□□□ -1.82
HDAC6-223ENST00000480525 MAP1LC3BQ9GZQ8 125 aa3.68□□□□□ -1.82
HDAC6-223ENST00000480525 MANBALQ9NQG1 85 aa3.68□□□□□ -1.82
HDAC6-223ENST00000480525 ZFP30Q9Y2G7 519 aa3.68□□□□□ -1.82
HDAC6-223ENST00000480525 C7orf71A4D174 169 aa3.67□□□□□ -1.82
HDAC6-223ENST00000480525 NUPR2A6NF83 97 aa3.67□□□□□ -1.82
HDAC6-223ENST00000480525 FAM74A7A6NL05 159 aa3.67□□□□□ -1.82
HDAC6-223ENST00000480525 GGTLC3B5MD39 225 aa3.67□□□□□ -1.82
HDAC6-223ENST00000480525 SMLR1H3BR10 107 aa3.67□□□□□ -1.82
HDAC6-223ENST00000480525 M0R3E3 92 aa3.67□□□□□ -1.82
HDAC6-223ENST00000480525 CIDEAO60543 219 aa3.67□□□□□ -1.82
HDAC6-223ENST00000480525 ZNF324O75467 553 aaPredicted RBP3.67□□□□□ -1.82
HDAC6-223ENST00000480525 H2AFB1P0C5Y9 115 aa3.67□□□□□ -1.82
HDAC6-223ENST00000480525 RPL35AP18077 110 aaKnown RBP3.67□□□□□ -1.82
HDAC6-223ENST00000480525 RANP62826 216 aaKnown RBP3.67□□□□□ -1.82
HDAC6-223ENST00000480525 BLOC1S1P78537 153 aa3.67□□□□□ -1.82
HDAC6-223ENST00000480525 HIST1H1AQ02539 215 aaPredicted RBP3.67□□□□□ -1.82
HDAC6-223ENST00000480525 DAZ2Q13117 558 aaKnown RBP3.67□□□□□ -1.82
HDAC6-223ENST00000480525 RRN3P1Q2M238 152 aa3.67□□□□□ -1.82
HDAC6-223ENST00000480525 LGALS9BQ3B8N2 356 aa3.67□□□□□ -1.82
HDAC6-223ENST00000480525 DNLZQ5SXM8 178 aa3.67□□□□□ -1.82
HDAC6-223ENST00000480525 C1orf158Q8N1D5 194 aa3.67□□□□□ -1.82
HDAC6-223ENST00000480525 ZFAND2AQ8N6M9 145 aa3.67□□□□□ -1.82
HDAC6-223ENST00000480525 LINC00612Q8N6U2 182 aa3.67□□□□□ -1.82
HDAC6-223ENST00000480525 OR4B1Q8NGF8 309 aa3.67□□□□□ -1.82
HDAC6-223ENST00000480525 RNASE8Q8TDE3 154 aaKnown RBP3.67□□□□□ -1.82
HDAC6-223ENST00000480525 C11orf52Q96A22 123 aa3.67□□□□□ -1.82
HDAC6-223ENST00000480525 PTH2Q96A98 100 aa3.67□□□□□ -1.82
HDAC6-223ENST00000480525 FMC1Q96HJ9 113 aa3.67□□□□□ -1.82
HDAC6-223ENST00000480525 NIPSNAP3BQ9BS92 247 aa3.67□□□□□ -1.82
HDAC6-223ENST00000480525 NDFIP1Q9BT67 221 aa3.67□□□□□ -1.82
HDAC6-223ENST00000480525 AGPAT4-IT1Q9H0P7 198 aa3.67□□□□□ -1.82
HDAC6-223ENST00000480525 SLC35B3Q9H1N7 401 aa3.67□□□□□ -1.82
HDAC6-223ENST00000480525 TMPRSS5Q9H3S3 457 aa3.67□□□□□ -1.82
HDAC6-223ENST00000480525 SMDT1Q9H4I9 107 aa3.67□□□□□ -1.82
HDAC6-223ENST00000480525 EPDR1Q9UM22 224 aa3.67□□□□□ -1.82
HDAC6-223ENST00000480525 TENM2Q9NT68 2774 aa3.67□□□□□ -1.82
HDAC6-223ENST00000480525 PGPA6NDG6 321 aa3.66□□□□□ -1.82
HDAC6-223ENST00000480525 PRAC2D3DTV9 90 aa3.66□□□□□ -1.82
HDAC6-223ENST00000480525 F6UB75 175 aa3.66□□□□□ -1.82
HDAC6-223ENST00000480525 TMEM250H0YL14 139 aa3.66□□□□□ -1.82
HDAC6-223ENST00000480525 H3BNG1 76 aa3.66□□□□□ -1.82
HDAC6-223ENST00000480525 PDE6DO43924 150 aa3.66□□□□□ -1.82
HDAC6-223ENST00000480525 IFNA1P01562 189 aa3.66□□□□□ -1.82
HDAC6-223ENST00000480525 IGLV2-11P01706 119 aa3.66□□□□□ -1.82
HDAC6-223ENST00000480525 CXCL1P09341 107 aa3.66□□□□□ -1.82
HDAC6-223ENST00000480525 SPART-AS1P0CW21 52 aa3.66□□□□□ -1.82
HDAC6-223ENST00000480525 CT45A10P0DMU9 189 aa3.66□□□□□ -1.82
HDAC6-223ENST00000480525 SPINK13Q1W4C9 94 aa3.66□□□□□ -1.82
HDAC6-223ENST00000480525 GFI1BQ5VTD9 330 aa3.66□□□□□ -1.82
HDAC6-223ENST00000480525 SSX7Q7RTT5 188 aa3.66□□□□□ -1.82
HDAC6-223ENST00000480525 EXOC3-AS1Q8N2X6 119 aa3.66□□□□□ -1.82
HDAC6-223ENST00000480525 BLNKQ8WV28 456 aa3.66□□□□□ -1.82
HDAC6-223ENST00000480525 KCNS1Q96KK3 526 aa3.66□□□□□ -1.82
HDAC6-223ENST00000480525 ASCL2Q99929 193 aa3.66□□□□□ -1.82
HDAC6-223ENST00000480525 XCL2Q9UBD3 114 aa3.66□□□□□ -1.82
HDAC6-223ENST00000480525 TRAV21A0A0B4J279 112 aa3.65□□□□□ -1.83
HDAC6-223ENST00000480525 IGHV4-28A0A0C4DH34 117 aa3.65□□□□□ -1.83
HDAC6-223ENST00000480525 A0A0J9YWU9 116 aa3.65□□□□□ -1.83
HDAC6-223ENST00000480525 PLAC8L1A1L4L8 177 aa3.65□□□□□ -1.83
HDAC6-223ENST00000480525 M0R2Z0 102 aa3.65□□□□□ -1.83
HDAC6-223ENST00000480525 PEX7O00628 323 aa3.65□□□□□ -1.83
HDAC6-223ENST00000480525 LTAP01374 205 aa3.65□□□□□ -1.83
HDAC6-223ENST00000480525 GPX1P07203 203 aa3.65□□□□□ -1.83
HDAC6-223ENST00000480525 PFN1P07737 140 aaKnown RBP3.65□□□□□ -1.83
HDAC6-223ENST00000480525 RBMY1A1P0DJD3 496 aaKnown RBP3.65□□□□□ -1.83
HDAC6-223ENST00000480525 RBMY1CP0DJD4 496 aa3.65□□□□□ -1.83
HDAC6-223ENST00000480525 HLA-DMBP28068 263 aa3.65□□□□□ -1.83
HDAC6-223ENST00000480525 SUMO1P63165 101 aaKnown RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms