RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 NDUFB4O95168 129 aa10.84□□□□□ -0.67
CDK9-203ENST00000480353 GPX1P07203 203 aa10.84□□□□□ -0.67
CDK9-203ENST00000480353 UBE2L3P68036 154 aaKnown RBP10.84□□□□□ -0.67
CDK9-203ENST00000480353 RNF212Q495C1 297 aa10.84□□□□□ -0.67
CDK9-203ENST00000480353 KHDC3LQ587J8 217 aa10.84□□□□□ -0.67
CDK9-203ENST00000480353 RNASE8Q8TDE3 154 aaKnown RBP10.84□□□□□ -0.67
CDK9-203ENST00000480353 RNF141Q8WVD5 230 aa10.84□□□□□ -0.67
CDK9-203ENST00000480353 RNASE4P34096 147 aaKnown RBP10.83□□□□□ -0.68
CDK9-203ENST00000480353 OR5I1Q13606 314 aa10.83□□□□□ -0.68
CDK9-203ENST00000480353 LINC00336Q6ZUF6 198 aa10.83□□□□□ -0.68
CDK9-203ENST00000480353 FAM167A-AS1Q96KT0 104 aa10.83□□□□□ -0.68
CDK9-203ENST00000480353 ALG5Q9Y673 324 aa10.83□□□□□ -0.68
CDK9-203ENST00000480353 DNAH6Q9C0G6 4158 aa10.83□□□□□ -0.68
CDK9-203ENST00000480353 IGKV2-40A0A087WW87 121 aaPredicted RBP10.82□□□□□ -0.68
CDK9-203ENST00000480353 A0A1W2PPV4 95 aa10.82□□□□□ -0.68
CDK9-203ENST00000480353 GAGE12BA1L429 117 aa10.82□□□□□ -0.68
CDK9-203ENST00000480353 RGS13O14921 159 aa10.82□□□□□ -0.68
CDK9-203ENST00000480353 GAGE7O76087 117 aa10.82□□□□□ -0.68
CDK9-203ENST00000480353 IGKV2D-40P01614 121 aaPredicted RBP10.82□□□□□ -0.68
CDK9-203ENST00000480353 GAGE12FP0CL80 117 aa10.82□□□□□ -0.68
CDK9-203ENST00000480353 GAGE12GP0CL81 117 aa10.82□□□□□ -0.68
CDK9-203ENST00000480353 GAGE12IP0CL82 117 aa10.82□□□□□ -0.68
CDK9-203ENST00000480353 RANP62826 216 aaKnown RBP10.82□□□□□ -0.68
CDK9-203ENST00000480353 ACOT6Q3I5F7 207 aaPredicted RBP10.82□□□□□ -0.68
CDK9-203ENST00000480353 ZNF680Q8NEM1 530 aa10.82□□□□□ -0.68
CDK9-203ENST00000480353 AGPAT4-IT1Q9H0P7 198 aa10.82□□□□□ -0.68
CDK9-203ENST00000480353 MED28Q9H204 178 aa10.82□□□□□ -0.68
CDK9-203ENST00000480353 PTTG1O95997 202 aa10.81□□□□□ -0.68
CDK9-203ENST00000480353 CCL18P55774 89 aa10.81□□□□□ -0.68
CDK9-203ENST00000480353 BTN1A1Q13410 526 aa10.81□□□□□ -0.68
CDK9-203ENST00000480353 SOHLH1Q5JUK2 328 aa10.81□□□□□ -0.68
CDK9-203ENST00000480353 FAM74A1Q5RGS3 127 aa10.81□□□□□ -0.68
CDK9-203ENST00000480353 FXYD5Q96DB9 178 aa10.81□□□□□ -0.68
CDK9-203ENST00000480353 VPS13DQ5THJ4 4388 aa10.81□□□□□ -0.68
CDK9-203ENST00000480353 LGALS9BQ3B8N2 356 aa10.8□□□□□ -0.68
CDK9-203ENST00000480353 C9orf47Q6ZRZ4 202 aa10.8□□□□□ -0.68
CDK9-203ENST00000480353 LYPD1Q8N2G4 141 aa10.8□□□□□ -0.68
CDK9-203ENST00000480353 EIF4E3Q8N5X7 224 aaKnown RBP10.8□□□□□ -0.68
CDK9-203ENST00000480353 CMTM2Q8TAZ6 248 aa10.8□□□□□ -0.68
CDK9-203ENST00000480353 PHYHIPLQ96FC7 376 aa10.8□□□□□ -0.68
CDK9-203ENST00000480353 ARPC5LQ9BPX5 153 aa10.8□□□□□ -0.68
CDK9-203ENST00000480353 Q9H3A6 140 aa10.8□□□□□ -0.68
CDK9-203ENST00000480353 TRGV2A0A075B6R0 118 aa10.79□□□□□ -0.68
CDK9-203ENST00000480353 KLLNB2CW77 178 aa10.79□□□□□ -0.68
CDK9-203ENST00000480353 ZNF138P52744 262 aa10.79□□□□□ -0.68
CDK9-203ENST00000480353 FAM3BP58499 235 aaPredicted RBP10.79□□□□□ -0.68
CDK9-203ENST00000480353 CD300CQ08708 224 aa10.79□□□□□ -0.68
CDK9-203ENST00000480353 ZNF266Q14584 549 aa10.79□□□□□ -0.68
CDK9-203ENST00000480353 GNPNAT1Q96EK6 184 aaPredicted RBP10.79□□□□□ -0.68
CDK9-203ENST00000480353 VGLL1Q99990 258 aa10.79□□□□□ -0.68
CDK9-203ENST00000480353 RPH3ALQ9UNE2 315 aa10.79□□□□□ -0.68
CDK9-203ENST00000480353 NMBP08949 121 aa10.78□□□□□ -0.68
CDK9-203ENST00000480353 M6PRP20645 277 aa10.78□□□□□ -0.68
CDK9-203ENST00000480353 RXFP4Q8TDU9 374 aa10.78□□□□□ -0.68
CDK9-203ENST00000480353 HYLS1Q96M11 299 aa10.78□□□□□ -0.68
CDK9-203ENST00000480353 GSN-AS1Q9NRJ2 163 aa10.78□□□□□ -0.68
CDK9-203ENST00000480353 ZNF492Q9P255 531 aa10.78□□□□□ -0.68
CDK9-203ENST00000480353 FRAS1Q86XX4 4008 aa10.78□□□□□ -0.68
CDK9-203ENST00000480353 NACAE9PAV3 2078 aa10.77□□□□□ -0.69
CDK9-203ENST00000480353 TRAV26-1A0A087WT03 109 aa10.77□□□□□ -0.69
CDK9-203ENST00000480353 TRGV1A0A0A0MS02 117 aa10.77□□□□□ -0.69
CDK9-203ENST00000480353 A0A0J9YY99 117 aa10.77□□□□□ -0.69
CDK9-203ENST00000480353 PRSS29PA6NIE9 313 aa10.77□□□□□ -0.69
CDK9-203ENST00000480353 CRISP2P16562 243 aa10.77□□□□□ -0.69
CDK9-203ENST00000480353 DAZ2Q13117 558 aaKnown RBP10.77□□□□□ -0.69
CDK9-203ENST00000480353 PQLC2Q6ZP29 291 aa10.77□□□□□ -0.69
CDK9-203ENST00000480353 OR10G4Q8NGN3 311 aa10.77□□□□□ -0.69
CDK9-203ENST00000480353 OR10G9Q8NGN4 311 aa10.77□□□□□ -0.69
CDK9-203ENST00000480353 OR10G7Q8NGN6 311 aa10.77□□□□□ -0.69
CDK9-203ENST00000480353 Q8TAT8 98 aa10.77□□□□□ -0.69
CDK9-203ENST00000480353 RBAKDNA6NC62 111 aa10.76□□□□□ -0.69
CDK9-203ENST00000480353 ZNF324O75467 553 aaPredicted RBP10.76□□□□□ -0.69
CDK9-203ENST00000480353 ANXA2RQ3ZCQ2 193 aa10.76□□□□□ -0.69
CDK9-203ENST00000480353 FAM19A4Q96LR4 140 aa10.76□□□□□ -0.69
CDK9-203ENST00000480353 LINC00467Q9BRT7 94 aa10.76□□□□□ -0.69
CDK9-203ENST00000480353 WFDC1Q9HC57 220 aa10.76□□□□□ -0.69
CDK9-203ENST00000480353 IGHV1OR15-1A0A075B7D0 117 aa10.75□□□□□ -0.69
CDK9-203ENST00000480353 TRBV7-9A0A0J9YWB2 115 aa10.75□□□□□ -0.69
CDK9-203ENST00000480353 PGPA6NDG6 321 aa10.75□□□□□ -0.69
CDK9-203ENST00000480353 C1orf134Q5TEV5 83 aa10.75□□□□□ -0.69
CDK9-203ENST00000480353 Q6ZTI0 123 aa10.75□□□□□ -0.69
CDK9-203ENST00000480353 HSD17B11Q8NBQ5 300 aa10.75□□□□□ -0.69
CDK9-203ENST00000480353 INO80EQ8NBZ0 244 aaPredicted RBP10.75□□□□□ -0.69
CDK9-203ENST00000480353 ZNF503Q96F45 646 aa10.75□□□□□ -0.69
CDK9-203ENST00000480353 TMPRSS5Q9H3S3 457 aa10.75□□□□□ -0.69
CDK9-203ENST00000480353 OTORQ9NRC9 128 aa10.75□□□□□ -0.69
CDK9-203ENST00000480353 DIRC3C9JPN6 131 aa10.74□□□□□ -0.69
CDK9-203ENST00000480353 EIF3GO75821 320 aaKnown RBP eCLIP10.74□□□□□ -0.69
CDK9-203ENST00000480353 CDC34P49427 236 aaPredicted RBP10.74□□□□□ -0.69
CDK9-203ENST00000480353 RAB2AP61019 212 aa10.74□□□□□ -0.69
CDK9-203ENST00000480353 ZNF415Q09FC8 603 aa10.74□□□□□ -0.69
CDK9-203ENST00000480353 IBA57Q5T440 356 aaKnown RBP10.74□□□□□ -0.69
CDK9-203ENST00000480353 ZFAND2AQ8N6M9 145 aa10.74□□□□□ -0.69
CDK9-203ENST00000480353 LINC00612Q8N6U2 182 aa10.74□□□□□ -0.69
CDK9-203ENST00000480353 DNAH10Q8IVF4 4471 aa10.74□□□□□ -0.69
CDK9-203ENST00000480353 HMGB3O15347 200 aaKnown RBP10.73□□□□□ -0.69
CDK9-203ENST00000480353 MBP02144 154 aa10.73□□□□□ -0.69
CDK9-203ENST00000480353 TCL1AP56279 114 aa10.73□□□□□ -0.69
CDK9-203ENST00000480353 MUC21Q5SSG8 566 aa10.73□□□□□ -0.69
CDK9-203ENST00000480353 PRR9Q5T870 116 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms