RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 TDRG1Q3Y452 100 aa10□□□□□ -0.81
SEC13-216ENST00000479868 FAM162BQ5T6X4 162 aa10□□□□□ -0.81
SEC13-216ENST00000479868 MAPK1IP1LQ8NDC0 245 aa10□□□□□ -0.81
SEC13-216ENST00000479868 URB1-AS1Q96HZ7 61 aa10□□□□□ -0.81
SEC13-216ENST00000479868 U3KQE9 123 aa10□□□□□ -0.81
SEC13-216ENST00000479868 LOC102724200A0A096LPH7 203 aaPredicted RBP10□□□□□ -0.81
SEC13-216ENST00000479868 RAB4AP20338 218 aa10□□□□□ -0.81
SEC13-216ENST00000479868 C1orf194Q5T5A4 169 aa10□□□□□ -0.81
SEC13-216ENST00000479868 ATP6V0BQ99437 205 aa10□□□□□ -0.81
SEC13-216ENST00000479868 KLK15Q9H2R5 256 aa10□□□□□ -0.81
SEC13-216ENST00000479868 ABCA12Q86UK0 2595 aa9.99□□□□□ -0.81
SEC13-216ENST00000479868 M0QZ24 198 aa9.99□□□□□ -0.81
SEC13-216ENST00000479868 RNASEKQ6P5S7 137 aaKnown RBP9.99□□□□□ -0.81
SEC13-216ENST00000479868 Q8N976 141 aa9.99□□□□□ -0.81
SEC13-216ENST00000479868 TRAV8-2A0A0B4J237 113 aa9.99□□□□□ -0.81
SEC13-216ENST00000479868 TMEM189A5PLL7 270 aa9.99□□□□□ -0.81
SEC13-216ENST00000479868 FBLL1A6NHQ2 334 aaKnown RBP9.99□□□□□ -0.81
SEC13-216ENST00000479868 M0QZK8 103 aa9.99□□□□□ -0.81
SEC13-216ENST00000479868 IGHV3-11P01762 117 aa9.99□□□□□ -0.81
SEC13-216ENST00000479868 GATA3P23771 443 aa9.99□□□□□ -0.81
SEC13-216ENST00000479868 UNQ9165/PRO28630Q6UXU0 137 aa9.99□□□□□ -0.81
SEC13-216ENST00000479868 TEX43Q6ZNM6 134 aa9.99□□□□□ -0.81
SEC13-216ENST00000479868 LCNL1Q6ZST4 164 aa9.99□□□□□ -0.81
SEC13-216ENST00000479868 SLC50A1Q9BRV3 221 aa9.99□□□□□ -0.81
SEC13-216ENST00000479868 HSBP1O75506 76 aa9.98□□□□□ -0.81
SEC13-216ENST00000479868 RIGQ13278 110 aa9.98□□□□□ -0.81
SEC13-216ENST00000479868 LINC01356Q8N9X3 169 aa9.98□□□□□ -0.81
SEC13-216ENST00000479868 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.97□□□□□ -0.81
SEC13-216ENST00000479868 KIR2DL5BA0A0G2JN68 375 aa9.97□□□□□ -0.81
SEC13-216ENST00000479868 KIR2DL5BA0A0G2JPC4 375 aa9.97□□□□□ -0.81
SEC13-216ENST00000479868 C3orf79P0CE67 100 aa9.97□□□□□ -0.81
SEC13-216ENST00000479868 Q6AWC8 147 aa9.97□□□□□ -0.81
SEC13-216ENST00000479868 LYZL1Q6UWQ5 148 aa9.97□□□□□ -0.81
SEC13-216ENST00000479868 C8orf86Q6ZUL3 223 aa9.97□□□□□ -0.81
SEC13-216ENST00000479868 REC114Q7Z4M0 266 aa9.97□□□□□ -0.81
SEC13-216ENST00000479868 KIR2DL5AQ8N109 375 aa9.97□□□□□ -0.81
SEC13-216ENST00000479868 NDFIP1Q9BT67 221 aa9.97□□□□□ -0.81
SEC13-216ENST00000479868 PF4V1P10720 104 aa9.97□□□□□ -0.81
SEC13-216ENST00000479868 ZNF575Q86XF7 245 aa9.97□□□□□ -0.81
SEC13-216ENST00000479868 H3BUA1 57 aa9.96□□□□□ -0.81
SEC13-216ENST00000479868 BRI3O95415 125 aa9.96□□□□□ -0.81
SEC13-216ENST00000479868 KRTAP10-9P60411 292 aa9.96□□□□□ -0.81
SEC13-216ENST00000479868 DEFB112Q30KQ8 113 aa9.96□□□□□ -0.81
SEC13-216ENST00000479868 MUC21A0A0G2JKD1 596 aa9.96□□□□□ -0.82
SEC13-216ENST00000479868 MUC21A0A140T8X8 626 aa9.96□□□□□ -0.82
SEC13-216ENST00000479868 RBAKDNA6NC62 111 aa9.96□□□□□ -0.82
SEC13-216ENST00000479868 M0R2Z0 102 aa9.96□□□□□ -0.82
SEC13-216ENST00000479868 SMAD7O15105 426 aaKnown RBP9.96□□□□□ -0.82
SEC13-216ENST00000479868 IGHV4-59P01825 116 aa9.96□□□□□ -0.82
SEC13-216ENST00000479868 MUC21Q5SSG8 566 aa9.96□□□□□ -0.82
SEC13-216ENST00000479868 IL17RELQ6ZVW7 336 aa9.96□□□□□ -0.82
SEC13-216ENST00000479868 GATD1Q8NB37 220 aa9.96□□□□□ -0.82
SEC13-216ENST00000479868 GLMPQ8WWB7 406 aa9.96□□□□□ -0.82
SEC13-216ENST00000479868 USMG5Q96IX5 58 aa9.96□□□□□ -0.82
SEC13-216ENST00000479868 NDUFAF3Q9BU61 184 aa9.96□□□□□ -0.82
SEC13-216ENST00000479868 TMEM213A2RRL7 107 aa9.95□□□□□ -0.82
SEC13-216ENST00000479868 NDUFA4O00483 81 aa9.95□□□□□ -0.82
SEC13-216ENST00000479868 TGFAP01135 160 aa9.95□□□□□ -0.82
SEC13-216ENST00000479868 IGLV1-40P01703 118 aa9.95□□□□□ -0.82
SEC13-216ENST00000479868 BMI1P35226 326 aa9.95□□□□□ -0.82
SEC13-216ENST00000479868 PMCHL1Q16048 86 aa9.95□□□□□ -0.82
SEC13-216ENST00000479868 BORCS7Q96B45 105 aa9.95□□□□□ -0.82
SEC13-216ENST00000479868 AGPAT4-IT1Q9H0P7 198 aa9.95□□□□□ -0.82
SEC13-216ENST00000479868 A0A1B0GW15 77 aa9.95□□□□□ -0.82
SEC13-216ENST00000479868 FAM181BA6NEQ2 426 aa9.95□□□□□ -0.82
SEC13-216ENST00000479868 G0S2P27469 103 aa9.95□□□□□ -0.82
SEC13-216ENST00000479868 NAV2Q8IVL1 2488 aa9.95□□□□□ -0.82
SEC13-216ENST00000479868 OR4X2Q8NGF9 303 aa9.95□□□□□ -0.82
SEC13-216ENST00000479868 PAM16Q9Y3D7 125 aa9.95□□□□□ -0.82
SEC13-216ENST00000479868 MXRA5Q9NR99 2828 aa9.95□□□□□ -0.82
SEC13-216ENST00000479868 RNF223E7ERA6 249 aa9.94□□□□□ -0.82
SEC13-216ENST00000479868 ZNF138P52744 262 aa9.94□□□□□ -0.82
SEC13-216ENST00000479868 CFHR3Q02985 330 aa9.94□□□□□ -0.82
SEC13-216ENST00000479868 ZNF493Q6ZR52 646 aa9.94□□□□□ -0.82
SEC13-216ENST00000479868 PSMG3-AS1Q96PY0 264 aa9.94□□□□□ -0.82
SEC13-216ENST00000479868 CR1P17927 2039 aa9.94□□□□□ -0.82
SEC13-216ENST00000479868 CYB5R2Q6BCY4 276 aa9.94□□□□□ -0.82
SEC13-216ENST00000479868 EBLN2Q6P2I7 272 aa9.94□□□□□ -0.82
SEC13-216ENST00000479868 VAMP8Q9BV40 100 aa9.94□□□□□ -0.82
SEC13-216ENST00000479868 FABP5P3A8MUU1 101 aa9.93□□□□□ -0.82
SEC13-216ENST00000479868 ORM1P02763 201 aa9.93□□□□□ -0.82
SEC13-216ENST00000479868 LBHQ53QV2 105 aaPredicted RBP9.93□□□□□ -0.82
SEC13-216ENST00000479868 GPHB5Q86YW7 130 aa9.93□□□□□ -0.82
SEC13-216ENST00000479868 IGHV1-24A0A0C4DH33 117 aa9.93□□□□□ -0.82
SEC13-216ENST00000479868 LINC00614P0C842 121 aa9.93□□□□□ -0.82
SEC13-216ENST00000479868 IGLC6P0CF74 106 aa9.93□□□□□ -0.82
SEC13-216ENST00000479868 FER1L6-AS1Q8NA97 138 aa9.93□□□□□ -0.82
SEC13-216ENST00000479868 CHCHD1Q96BP2 118 aaKnown RBP9.93□□□□□ -0.82
SEC13-216ENST00000479868 MRPL53Q96EL3 112 aaKnown RBP9.93□□□□□ -0.82
SEC13-216ENST00000479868 C16orf92Q96LL3 132 aa9.93□□□□□ -0.82
SEC13-216ENST00000479868 C20orf173Q96LM9 149 aa9.93□□□□□ -0.82
SEC13-216ENST00000479868 CLEC5AQ9NY25 188 aa9.93□□□□□ -0.82
SEC13-216ENST00000479868 NBPF19A0A087WUL8 3843 aa9.92□□□□□ -0.82
SEC13-216ENST00000479868 C2orf70A6NJV1 201 aa9.92□□□□□ -0.82
SEC13-216ENST00000479868 J3QLI3 93 aa9.92□□□□□ -0.82
SEC13-216ENST00000479868 TCAPO15273 167 aa9.92□□□□□ -0.82
SEC13-216ENST00000479868 CSN3P07498 182 aa9.92□□□□□ -0.82
SEC13-216ENST00000479868 CTRLP40313 264 aa9.92□□□□□ -0.82
SEC13-216ENST00000479868 RPS20P60866 119 aaKnown RBP9.92□□□□□ -0.82
SEC13-216ENST00000479868 TEX15Q9BXT5 2789 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms