RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 HSBP1L1C9JCN9 74 aa8.37□□□□□ -1.07
VPS52-217ENST00000478934 SLC25A34Q6PIV7 304 aa8.37□□□□□ -1.07
VPS52-217ENST00000478934 RNASE8Q8TDE3 154 aaKnown RBP8.37□□□□□ -1.07
VPS52-217ENST00000478934 SCRT2Q9NQ03 307 aa8.37□□□□□ -1.07
VPS52-217ENST00000478934 RABAC1Q9UI14 185 aa8.37□□□□□ -1.07
VPS52-217ENST00000478934 CUBNO60494 3623 aa8.37□□□□□ -1.07
VPS52-217ENST00000478934 PIEZO1Q92508 2521 aa8.37□□□□□ -1.07
VPS52-217ENST00000478934 GNLYP22749 145 aa8.36□□□□□ -1.07
VPS52-217ENST00000478934 CSN1S1P47710 185 aa8.36□□□□□ -1.07
VPS52-217ENST00000478934 TWIST1Q15672 202 aa8.36□□□□□ -1.07
VPS52-217ENST00000478934 C1orf122Q6ZSJ8 110 aa8.36□□□□□ -1.07
VPS52-217ENST00000478934 ZNF738Q8NE65 137 aa8.36□□□□□ -1.07
VPS52-217ENST00000478934 ZNF747Q9BV97 191 aa8.36□□□□□ -1.07
VPS52-217ENST00000478934 THYN1Q9P016 225 aa8.36□□□□□ -1.07
VPS52-217ENST00000478934 RNF24Q9Y225 148 aa8.36□□□□□ -1.07
VPS52-217ENST00000478934 VAMP3Q15836 100 aa8.36□□□□□ -1.07
VPS52-217ENST00000478934 FAM162BQ5T6X4 162 aa8.36□□□□□ -1.07
VPS52-217ENST00000478934 MINOS1Q5TGZ0 78 aa8.36□□□□□ -1.07
VPS52-217ENST00000478934 BRD3OSQ6XYD6 125 aa8.36□□□□□ -1.07
VPS52-217ENST00000478934 CCDC140Q96MF4 163 aa8.36□□□□□ -1.07
VPS52-217ENST00000478934 ST20Q9HBF5 79 aa8.36□□□□□ -1.07
VPS52-217ENST00000478934 MINOS1-NBL1R4GNA1 71 aa8.36□□□□□ -1.07
VPS52-217ENST00000478934 USP9XQ93008 2570 aaPredicted RBP8.35□□□□□ -1.07
VPS52-217ENST00000478934 RPL7P18124 248 aaKnown RBP8.35□□□□□ -1.07
VPS52-217ENST00000478934 MRPL51Q4U2R6 128 aaKnown RBP8.35□□□□□ -1.07
VPS52-217ENST00000478934 ZNF502Q8TBZ5 544 aa8.35□□□□□ -1.07
VPS52-217ENST00000478934 PRELID3AQ96N28 172 aa8.35□□□□□ -1.07
VPS52-217ENST00000478934 C18orf15Q96N68 181 aa8.35□□□□□ -1.07
VPS52-217ENST00000478934 HSPB8Q9UJY1 196 aa8.35□□□□□ -1.07
VPS52-217ENST00000478934 CLPSL1A2RUU4 121 aa8.35□□□□□ -1.07
VPS52-217ENST00000478934 NPYP01303 97 aa8.35□□□□□ -1.07
VPS52-217ENST00000478934 ORM1P02763 201 aa8.35□□□□□ -1.07
VPS52-217ENST00000478934 UBE2E1P51965 193 aa8.35□□□□□ -1.07
VPS52-217ENST00000478934 EFNA4P52798 201 aa8.35□□□□□ -1.07
VPS52-217ENST00000478934 PDE6HQ13956 83 aa8.35□□□□□ -1.07
VPS52-217ENST00000478934 BVES-AS1Q5T3Y7 98 aa8.35□□□□□ -1.07
VPS52-217ENST00000478934 ORAOV1Q8WV07 137 aa8.35□□□□□ -1.07
VPS52-217ENST00000478934 ITLN2Q8WWU7 325 aaPredicted RBP8.35□□□□□ -1.07
VPS52-217ENST00000478934 ZNF48Q96MX3 618 aaPredicted RBP8.35□□□□□ -1.07
VPS52-217ENST00000478934 CENPVL3A0A0U1RRI6 287 aa8.34□□□□□ -1.07
VPS52-217ENST00000478934 EVI2AP22794 236 aa8.34□□□□□ -1.07
VPS52-217ENST00000478934 PSG9Q00887 426 aa8.34□□□□□ -1.07
VPS52-217ENST00000478934 ANKRD39Q53RE8 183 aa8.34□□□□□ -1.07
VPS52-217ENST00000478934 PET117Q6UWS5 81 aa8.34□□□□□ -1.07
VPS52-217ENST00000478934 OR10AG1Q8NH19 301 aa8.34□□□□□ -1.07
VPS52-217ENST00000478934 ZFAND3Q9H8U3 227 aa8.34□□□□□ -1.07
VPS52-217ENST00000478934 ZANQ9Y493 2812 aa8.34□□□□□ -1.07
VPS52-217ENST00000478934 TAX1BP3O14907 124 aa8.34□□□□□ -1.07
VPS52-217ENST00000478934 GATA1P15976 413 aaPredicted RBP8.34□□□□□ -1.07
VPS52-217ENST00000478934 CACNG7P62955 275 aa8.34□□□□□ -1.07
VPS52-217ENST00000478934 UBE2V1Q13404 147 aa8.34□□□□□ -1.07
VPS52-217ENST00000478934 LINC01545Q5VT33 79 aa8.34□□□□□ -1.07
VPS52-217ENST00000478934 FAM104BQ5XKR9 115 aa8.34□□□□□ -1.07
VPS52-217ENST00000478934 IL17RELQ6ZVW7 336 aa8.34□□□□□ -1.07
VPS52-217ENST00000478934 NAA38Q9BRA0 125 aaKnown RBP8.34□□□□□ -1.07
VPS52-217ENST00000478934 POLQO75417 2590 aa8.34□□□□□ -1.07
VPS52-217ENST00000478934 IGSF10Q6WRI0 2623 aa8.34□□□□□ -1.07
VPS52-217ENST00000478934 BUB3O43684 328 aa8.33□□□□□ -1.08
VPS52-217ENST00000478934 CKS2P33552 79 aa8.33□□□□□ -1.08
VPS52-217ENST00000478934 PRSS57Q6UWY2 283 aa8.33□□□□□ -1.08
VPS52-217ENST00000478934 FAM110DQ8TAY7 271 aaPredicted RBP8.33□□□□□ -1.08
VPS52-217ENST00000478934 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.33□□□□□ -1.088e-10■■■■□ 26.3
VPS52-217ENST00000478934 OOSP1A8MZH6 123 aa8.33□□□□□ -1.08
VPS52-217ENST00000478934 NPFFO15130 113 aa8.33□□□□□ -1.08
VPS52-217ENST00000478934 SPRY2O43597 315 aa8.33□□□□□ -1.08
VPS52-217ENST00000478934 IGHV4-39P01824 125 aa8.33□□□□□ -1.08
VPS52-217ENST00000478934 DEFB1P60022 68 aa8.33□□□□□ -1.08
VPS52-217ENST00000478934 ZFYVE26Q68DK2 2539 aa8.33□□□□□ -1.08
VPS52-217ENST00000478934 J3KRW8 73 aa8.33□□□□□ -1.08
VPS52-217ENST00000478934 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.33□□□□□ -1.08
VPS52-217ENST00000478934 C2orf91Q6ZV80 131 aa8.33□□□□□ -1.08
VPS52-217ENST00000478934 ORMDL3Q8N138 153 aa8.33□□□□□ -1.08
VPS52-217ENST00000478934 FER1L6-AS1Q8NA97 138 aa8.33□□□□□ -1.08
VPS52-217ENST00000478934 OR4C5Q8NGB2 326 aa8.33□□□□□ -1.08
VPS52-217ENST00000478934 C11orf21Q9P2W6 132 aa8.33□□□□□ -1.08
VPS52-217ENST00000478934 MYO18BQ8IUG5 2567 aa8.32□□□□□ -1.08
VPS52-217ENST00000478934 TRBV12-3P01733 135 aa8.32□□□□□ -1.08
VPS52-217ENST00000478934 LCNL1Q6ZST4 164 aa8.32□□□□□ -1.08
VPS52-217ENST00000478934 CSPG4Q6UVK1 2322 aa8.32□□□□□ -1.08
VPS52-217ENST00000478934 LY6EQ16553 131 aa8.32□□□□□ -1.08
VPS52-217ENST00000478934 AMMECR1LQ6DCA0 310 aa8.32□□□□□ -1.08
VPS52-217ENST00000478934 ZNF493Q6ZR52 646 aa8.32□□□□□ -1.08
VPS52-217ENST00000478934 PSMG3-AS1Q96PY0 264 aa8.32□□□□□ -1.08
VPS52-217ENST00000478934 DKK2Q9UBU2 259 aa8.32□□□□□ -1.08
VPS52-217ENST00000478934 TRAV8-2A0A0B4J237 113 aa8.31□□□□□ -1.08
VPS52-217ENST00000478934 SAPCD1Q5SSQ6 148 aa8.31□□□□□ -1.08
VPS52-217ENST00000478934 GATD1Q8NB37 220 aa8.31□□□□□ -1.08
VPS52-217ENST00000478934 TTTY13Q9BZ97 58 aa8.31□□□□□ -1.08
VPS52-217ENST00000478934 IGHV4-61A0A0C4DH41 118 aa8.31□□□□□ -1.08
VPS52-217ENST00000478934 IGF1P05019 195 aa8.31□□□□□ -1.08
VPS52-217ENST00000478934 TM4SF20Q53R12 229 aa8.31□□□□□ -1.08
VPS52-217ENST00000478934 C5orf56Q8N8D9 126 aa8.31□□□□□ -1.08
VPS52-217ENST00000478934 PIFOQ8TCI5 191 aa8.31□□□□□ -1.08
VPS52-217ENST00000478934 AGPAT4-IT1Q9H0P7 198 aa8.31□□□□□ -1.08
VPS52-217ENST00000478934 USP9YO00507 2555 aaPredicted RBP8.3□□□□□ -1.08
VPS52-217ENST00000478934 CACNA1AO00555 2505 aa8.3□□□□□ -1.08
VPS52-217ENST00000478934 RNF151Q2KHN1 245 aa8.3□□□□□ -1.08
VPS52-217ENST00000478934 Q6AWC8 147 aa8.3□□□□□ -1.08
VPS52-217ENST00000478934 Q6ZS46 218 aa8.3□□□□□ -1.08
VPS52-217ENST00000478934 S100A7AQ86SG5 101 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms