RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 TRAV6A0A075B6T7 132 aa9.11□□□□□ -0.95
VCL-205ENST00000478896 KLLNB2CW77 178 aa9.11□□□□□ -0.95
VCL-205ENST00000478896 RGS13O14921 159 aa9.11□□□□□ -0.95
VCL-205ENST00000478896 EREGO14944 169 aa9.11□□□□□ -0.95
VCL-205ENST00000478896 IGHV3-53P01767 116 aa9.11□□□□□ -0.95
VCL-205ENST00000478896 GPX1P07203 203 aa9.11□□□□□ -0.95
VCL-205ENST00000478896 FGF7P21781 194 aa9.11□□□□□ -0.95
VCL-205ENST00000478896 RNASE4P34096 147 aaKnown RBP9.11□□□□□ -0.95
VCL-205ENST00000478896 SULT1A1P50225 295 aa9.11□□□□□ -0.95
VCL-205ENST00000478896 HBG1P69891 147 aa9.11□□□□□ -0.95
VCL-205ENST00000478896 HBG2P69892 147 aa9.11□□□□□ -0.95
VCL-205ENST00000478896 CD300CQ08708 224 aa9.11□□□□□ -0.95
VCL-205ENST00000478896 ANXA2RQ3ZCQ2 193 aa9.11□□□□□ -0.95
VCL-205ENST00000478896 LINC00477Q96M19 166 aa9.11□□□□□ -0.95
VCL-205ENST00000478896 C18orf15Q96N68 181 aa9.11□□□□□ -0.95
VCL-205ENST00000478896 ARPC5LQ9BPX5 153 aa9.11□□□□□ -0.95
VCL-205ENST00000478896 PAX4O43316 350 aa9.1□□□□□ -0.95
VCL-205ENST00000478896 LYRM1O43325 122 aa9.1□□□□□ -0.95
VCL-205ENST00000478896 MPDU1O75352 247 aa9.1□□□□□ -0.95
VCL-205ENST00000478896 NXPH4O95158 308 aa9.1□□□□□ -0.95
VCL-205ENST00000478896 PYYP10082 97 aa9.1□□□□□ -0.95
VCL-205ENST00000478896 HIST1H1EP10412 219 aaKnown RBP9.1□□□□□ -0.95
VCL-205ENST00000478896 S100A11P31949 105 aa9.1□□□□□ -0.95
VCL-205ENST00000478896 TCL1AP56279 114 aa9.1□□□□□ -0.95
VCL-205ENST00000478896 ERVFC1-1P60608 527 aa9.1□□□□□ -0.95
VCL-205ENST00000478896 PDE6HQ13956 83 aa9.1□□□□□ -0.95
VCL-205ENST00000478896 VWC2Q2TAL6 325 aa9.1□□□□□ -0.95
VCL-205ENST00000478896 EXOC3-AS1Q8N2X6 119 aa9.1□□□□□ -0.95
VCL-205ENST00000478896 C2orf50Q96LR7 162 aa9.1□□□□□ -0.95
VCL-205ENST00000478896 SEC22CQ9BRL7 303 aa9.1□□□□□ -0.95
VCL-205ENST00000478896 LYRM2Q9NU23 88 aaPredicted RBP9.1□□□□□ -0.95
VCL-205ENST00000478896 TMEM14CQ9P0S9 112 aa9.1□□□□□ -0.95
VCL-205ENST00000478896 KLF12Q9Y4X4 402 aa9.1□□□□□ -0.95
VCL-205ENST00000478896 IGKV2-40A0A087WW87 121 aaPredicted RBP9.09□□□□□ -0.95
VCL-205ENST00000478896 SPINK4O60575 86 aa9.09□□□□□ -0.95
VCL-205ENST00000478896 ZNF324O75467 553 aaPredicted RBP9.09□□□□□ -0.95
VCL-205ENST00000478896 IGKV2D-40P01614 121 aaPredicted RBP9.09□□□□□ -0.95
VCL-205ENST00000478896 TCRBP04435 133 aa9.09□□□□□ -0.95
VCL-205ENST00000478896 IBA57Q5T440 356 aaKnown RBP9.09□□□□□ -0.95
VCL-205ENST00000478896 TMEM78Q5T7P6 136 aa9.09□□□□□ -0.95
VCL-205ENST00000478896 FAM122CQ6P4D5 195 aa9.09□□□□□ -0.95
VCL-205ENST00000478896 ST6GAL2Q96JF0 529 aa9.09□□□□□ -0.95
VCL-205ENST00000478896 LINC00467Q9BRT7 94 aa9.09□□□□□ -0.95
VCL-205ENST00000478896 AGPAT4-IT1Q9H0P7 198 aa9.09□□□□□ -0.95
VCL-205ENST00000478896 GPN1Q9HCN4 374 aaPredicted RBP9.09□□□□□ -0.95
VCL-205ENST00000478896 NUDT15Q9NV35 164 aa9.09□□□□□ -0.95
VCL-205ENST00000478896 MRPL16Q9NX20 251 aaKnown RBP9.09□□□□□ -0.95
VCL-205ENST00000478896 IGSF23A1L1A6 192 aa9.08□□□□□ -0.96
VCL-205ENST00000478896 EPM2AB3EWF7 344 aa9.08□□□□□ -0.96
VCL-205ENST00000478896 NDUFB4O95168 129 aa9.08□□□□□ -0.96
VCL-205ENST00000478896 RAB32Q13637 225 aa9.08□□□□□ -0.96
VCL-205ENST00000478896 ICAM4Q14773 271 aa9.08□□□□□ -0.96
VCL-205ENST00000478896 Q6ZRN7 208 aaPredicted RBP9.08□□□□□ -0.96
VCL-205ENST00000478896 TMEM252Q8N6L7 170 aa9.08□□□□□ -0.96
VCL-205ENST00000478896 FAM19A4Q96LR4 140 aa9.08□□□□□ -0.96
VCL-205ENST00000478896 C11orf1Q9H5F2 150 aa9.08□□□□□ -0.96
VCL-205ENST00000478896 PRO0255Q9UI72 69 aa9.08□□□□□ -0.96
VCL-205ENST00000478896 TP53TG3Q9ULZ0 132 aa9.08□□□□□ -0.96
VCL-205ENST00000478896 IGHV1OR15-1A0A075B7D0 117 aa9.07□□□□□ -0.96
VCL-205ENST00000478896 PLA2G10O15496 165 aa9.07□□□□□ -0.96
VCL-205ENST00000478896 CRISP2P16562 243 aa9.07□□□□□ -0.96
VCL-205ENST00000478896 FUSP35637 526 aaKnown RBP eCLIP9.07□□□□□ -0.96
VCL-205ENST00000478896 ZNF415Q09FC8 603 aa9.07□□□□□ -0.96
VCL-205ENST00000478896 SLAQ13239 276 aa9.07□□□□□ -0.96
VCL-205ENST00000478896 ATP6V1FQ16864 119 aa9.07□□□□□ -0.96
VCL-205ENST00000478896 C9orf47Q6ZRZ4 202 aa9.07□□□□□ -0.96
VCL-205ENST00000478896 VGLL1Q99990 258 aa9.07□□□□□ -0.96
VCL-205ENST00000478896 SLC25A2Q9BXI2 301 aa9.07□□□□□ -0.96
VCL-205ENST00000478896 NPCDR1Q9BY65 106 aa9.07□□□□□ -0.96
VCL-205ENST00000478896 APOBP04114 4563 aaKnown RBP9.06□□□□□ -0.96
VCL-205ENST00000478896 MRPL23Q16540 153 aaKnown RBP9.06□□□□□ -0.96
VCL-205ENST00000478896 GCSAMLQ5JQS6 135 aa9.06□□□□□ -0.96
VCL-205ENST00000478896 PRR9Q5T870 116 aa9.06□□□□□ -0.96
VCL-205ENST00000478896 CDPF1Q6NVV7 123 aa9.06□□□□□ -0.96
VCL-205ENST00000478896 NFE4Q86UQ8 179 aa9.06□□□□□ -0.96
VCL-205ENST00000478896 ZFAND2AQ8N6M9 145 aa9.06□□□□□ -0.96
VCL-205ENST00000478896 THAP6Q8TBB0 222 aa9.06□□□□□ -0.96
VCL-205ENST00000478896 CHAC2Q8WUX2 184 aa9.06□□□□□ -0.96
VCL-205ENST00000478896 C8orf49Q96NF6 230 aa9.06□□□□□ -0.96
VCL-205ENST00000478896 PGPEP1Q9NXJ5 209 aa9.06□□□□□ -0.96
VCL-205ENST00000478896 ZNF492Q9P255 531 aa9.06□□□□□ -0.96
VCL-205ENST00000478896 HHLA3Q9XRX5 114 aa9.06□□□□□ -0.96
VCL-205ENST00000478896 DNAH5Q8TE73 4624 aa9.05□□□□□ -0.96
VCL-205ENST00000478896 TRAV9-2A0A087WT02 112 aa9.05□□□□□ -0.96
VCL-205ENST00000478896 TRGV4A0A0C4DH28 118 aa9.05□□□□□ -0.96
VCL-205ENST00000478896 NMBP08949 121 aa9.05□□□□□ -0.96
VCL-205ENST00000478896 CRYBA4P53673 196 aa9.05□□□□□ -0.96
VCL-205ENST00000478896 MIR17HGQ75NE6 70 aa9.05□□□□□ -0.96
VCL-205ENST00000478896 NEGR1Q7Z3B1 354 aa9.05□□□□□ -0.96
VCL-205ENST00000478896 Q8TAT8 98 aa9.05□□□□□ -0.96
VCL-205ENST00000478896 PCNPQ8WW12 178 aaKnown RBP9.05□□□□□ -0.96
VCL-205ENST00000478896 OR51M1Q9H341 326 aa9.05□□□□□ -0.96
VCL-205ENST00000478896 TNFRSF18Q9Y5U5 241 aa9.05□□□□□ -0.96
VCL-205ENST00000478896 LY96Q9Y6Y9 160 aa9.05□□□□□ -0.96
VCL-205ENST00000478896 E5RGE8 158 aa9.04□□□□□ -0.96
VCL-205ENST00000478896 PRAF2O60831 178 aa9.04□□□□□ -0.96
VCL-205ENST00000478896 IFNA5P01569 189 aa9.04□□□□□ -0.96
VCL-205ENST00000478896 H2AFB2P0C5Z0 115 aa9.04□□□□□ -0.96
VCL-205ENST00000478896 OR10J4P0C629 311 aa9.04□□□□□ -0.96
VCL-205ENST00000478896 NBEAP1P0C6P0 100 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 201.4 ms