RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 H3BQ15 152 aa6.57□□□□□ -1.36
CCM2-210ENST00000478169 H3BTX0 84 aa6.57□□□□□ -1.36
CCM2-210ENST00000478169 SPINK4O60575 86 aa6.57□□□□□ -1.36
CCM2-210ENST00000478169 ZNF253O75346 499 aa6.57□□□□□ -1.36
CCM2-210ENST00000478169 KRTAP10-1P60331 282 aa6.57□□□□□ -1.36
CCM2-210ENST00000478169 OPCMLQ14982 345 aa6.57□□□□□ -1.36
CCM2-210ENST00000478169 MORN5Q5VZ52 161 aa6.57□□□□□ -1.36
CCM2-210ENST00000478169 LYPD5Q6UWN5 251 aa6.57□□□□□ -1.36
CCM2-210ENST00000478169 EIF4E3Q8N5X7 224 aaKnown RBP6.57□□□□□ -1.36
CCM2-210ENST00000478169 ENKURQ8TC29 256 aa6.57□□□□□ -1.36
CCM2-210ENST00000478169 MRPL53Q96EL3 112 aaKnown RBP6.57□□□□□ -1.36
CCM2-210ENST00000478169 ST6GAL2Q96JF0 529 aa6.57□□□□□ -1.36
CCM2-210ENST00000478169 DNAJC4Q9NNZ3 241 aa6.57□□□□□ -1.36
CCM2-210ENST00000478169 PRO0255Q9UI72 69 aa6.57□□□□□ -1.36
CCM2-210ENST00000478169 TNFRSF18Q9Y5U5 241 aa6.57□□□□□ -1.36
CCM2-210ENST00000478169 FAM229AH3BQW9 127 aa6.56□□□□□ -1.36
CCM2-210ENST00000478169 OR4E1P0C645 316 aa6.56□□□□□ -1.36
CCM2-210ENST00000478169 DNAH10OSP0CZ25 163 aa6.56□□□□□ -1.36
CCM2-210ENST00000478169 GCSHP23434 173 aa6.56□□□□□ -1.36
CCM2-210ENST00000478169 TCL1AP56279 114 aa6.56□□□□□ -1.36
CCM2-210ENST00000478169 ASAH1Q13510 395 aa6.56□□□□□ -1.36
CCM2-210ENST00000478169 RAB31Q13636 194 aa6.56□□□□□ -1.36
CCM2-210ENST00000478169 MRPL23Q16540 153 aaKnown RBP6.56□□□□□ -1.36
CCM2-210ENST00000478169 IBA57Q5T440 356 aaKnown RBP6.56□□□□□ -1.36
CCM2-210ENST00000478169 Q6ZRG5 221 aa6.56□□□□□ -1.36
CCM2-210ENST00000478169 NEGR1Q7Z3B1 354 aa6.56□□□□□ -1.36
CCM2-210ENST00000478169 FAM19A4Q96LR4 140 aa6.56□□□□□ -1.36
CCM2-210ENST00000478169 LINC00477Q96M19 166 aa6.56□□□□□ -1.36
CCM2-210ENST00000478169 MGST2Q99735 147 aa6.56□□□□□ -1.36
CCM2-210ENST00000478169 LY96Q9Y6Y9 160 aa6.56□□□□□ -1.36
CCM2-210ENST00000478169 ATP6V1G1O75348 118 aa6.55□□□□□ -1.36
CCM2-210ENST00000478169 MPDU1O75352 247 aa6.55□□□□□ -1.36
CCM2-210ENST00000478169 NMBP08949 121 aa6.55□□□□□ -1.36
CCM2-210ENST00000478169 CAMLGP49069 296 aa6.55□□□□□ -1.36
CCM2-210ENST00000478169 CRYBA4P53673 196 aa6.55□□□□□ -1.36
CCM2-210ENST00000478169 ARL16Q0P5N6 197 aa6.55□□□□□ -1.36
CCM2-210ENST00000478169 VGLL1Q99990 258 aa6.55□□□□□ -1.36
CCM2-210ENST00000478169 MSRB1Q9NZV6 116 aa6.55□□□□□ -1.36
CCM2-210ENST00000478169 HHLA3Q9XRX5 114 aa6.55□□□□□ -1.36
CCM2-210ENST00000478169 PRELID1Q9Y255 219 aa6.55□□□□□ -1.36
CCM2-210ENST00000478169 RCL1Q9Y2P8 373 aaKnown RBP6.55□□□□□ -1.36
CCM2-210ENST00000478169 KLF12Q9Y4X4 402 aa6.55□□□□□ -1.36
CCM2-210ENST00000478169 V9GYH0 126 aa6.55□□□□□ -1.36
CCM2-210ENST00000478169 TRBV19A0A075B6N1 114 aa6.54□□□□□ -1.36
CCM2-210ENST00000478169 TRAV5A0A0B4J249 113 aa6.54□□□□□ -1.36
CCM2-210ENST00000478169 C7orf66A4D0T2 115 aa6.54□□□□□ -1.36
CCM2-210ENST00000478169 NAP1L6A6NFF2 107 aa6.54□□□□□ -1.36
CCM2-210ENST00000478169 NDUFB6O95139 128 aa6.54□□□□□ -1.36
CCM2-210ENST00000478169 SCGB1D2O95969 90 aa6.54□□□□□ -1.36
CCM2-210ENST00000478169 SMR3BP02814 79 aaPredicted RBP6.54□□□□□ -1.36
CCM2-210ENST00000478169 GPX1P07203 203 aa6.54□□□□□ -1.36
CCM2-210ENST00000478169 IL7P13232 177 aa6.54□□□□□ -1.36
CCM2-210ENST00000478169 CRISP2P16562 243 aa6.54□□□□□ -1.36
CCM2-210ENST00000478169 EVI2AP22794 236 aa6.54□□□□□ -1.36
CCM2-210ENST00000478169 RNASE4P34096 147 aaKnown RBP6.54□□□□□ -1.36
CCM2-210ENST00000478169 CD300CQ08708 224 aa6.54□□□□□ -1.36
CCM2-210ENST00000478169 ERCC8Q13216 396 aa6.54□□□□□ -1.36
CCM2-210ENST00000478169 FHL2Q14192 279 aa6.54□□□□□ -1.36
CCM2-210ENST00000478169 IAH1Q2TAA2 248 aaPredicted RBP6.54□□□□□ -1.36
CCM2-210ENST00000478169 ZFP69Q49AA0 526 aa6.54□□□□□ -1.36
CCM2-210ENST00000478169 C12orf45Q8N5I9 185 aaPredicted RBP6.54□□□□□ -1.36
CCM2-210ENST00000478169 OR1L4Q8NGR5 311 aa6.54□□□□□ -1.36
CCM2-210ENST00000478169 PFDN5Q99471 154 aa6.54□□□□□ -1.36
CCM2-210ENST00000478169 MRPL32Q9BYC8 188 aaKnown RBP6.54□□□□□ -1.36
CCM2-210ENST00000478169 AGPAT4-IT1Q9H0P7 198 aa6.54□□□□□ -1.36
CCM2-210ENST00000478169 MDFICQ9P1T7 246 aa6.54□□□□□ -1.36
CCM2-210ENST00000478169 FAM240BA0A1B0GVZ2 78 aa6.53□□□□□ -1.36
CCM2-210ENST00000478169 M0R3E3 92 aa6.53□□□□□ -1.36
CCM2-210ENST00000478169 RGS13O14921 159 aa6.53□□□□□ -1.36
CCM2-210ENST00000478169 PRAF2O60831 178 aa6.53□□□□□ -1.36
CCM2-210ENST00000478169 IGHV3-53P01767 116 aa6.53□□□□□ -1.36
CCM2-210ENST00000478169 IFITM3Q01628 133 aa6.53□□□□□ -1.36
CCM2-210ENST00000478169 BTN1A1Q13410 526 aa6.53□□□□□ -1.36
CCM2-210ENST00000478169 PDE6HQ13956 83 aa6.53□□□□□ -1.36
CCM2-210ENST00000478169 MIC13Q5XKP0 118 aa6.53□□□□□ -1.36
CCM2-210ENST00000478169 C9orf47Q6ZRZ4 202 aa6.53□□□□□ -1.36
CCM2-210ENST00000478169 Q6ZSN1 163 aa6.53□□□□□ -1.36
CCM2-210ENST00000478169 NRARPQ7Z6K4 114 aa6.53□□□□□ -1.36
CCM2-210ENST00000478169 IQCF2Q8IXL9 164 aa6.53□□□□□ -1.36
CCM2-210ENST00000478169 C10orf126Q8N4M7 172 aa6.53□□□□□ -1.36
CCM2-210ENST00000478169 C8orf49Q96NF6 230 aa6.53□□□□□ -1.36
CCM2-210ENST00000478169 TMEM70Q9BUB7 260 aa6.53□□□□□ -1.36
CCM2-210ENST00000478169 SRRQ9GZT4 340 aa6.53□□□□□ -1.36
CCM2-210ENST00000478169 MRPL16Q9NX20 251 aaKnown RBP6.53□□□□□ -1.36
CCM2-210ENST00000478169 GSKIPQ9P0R6 139 aa6.53□□□□□ -1.36
CCM2-210ENST00000478169 TMEM14CQ9P0S9 112 aa6.53□□□□□ -1.36
CCM2-210ENST00000478169 IGHV1OR15-1A0A075B7D0 117 aa6.52□□□□□ -1.37
CCM2-210ENST00000478169 NDUFB4O95168 129 aa6.52□□□□□ -1.37
CCM2-210ENST00000478169 MBPP02686 304 aaPredicted RBP6.52□□□□□ -1.37
CCM2-210ENST00000478169 HIST1H1EP10412 219 aaKnown RBP6.52□□□□□ -1.37
CCM2-210ENST00000478169 SRIP30626 198 aa6.52□□□□□ -1.37
CCM2-210ENST00000478169 RPL29P47914 159 aaKnown RBP6.52□□□□□ -1.37
CCM2-210ENST00000478169 NTN5Q8WTR8 489 aaPredicted RBP6.52□□□□□ -1.37
CCM2-210ENST00000478169 ARPC5LQ9BPX5 153 aa6.52□□□□□ -1.37
CCM2-210ENST00000478169 C20orf85Q9H1P6 137 aa6.52□□□□□ -1.37
CCM2-210ENST00000478169 TP53TG3Q9ULZ0 132 aa6.52□□□□□ -1.37
CCM2-210ENST00000478169 FLVCR2Q9UPI3 526 aa6.52□□□□□ -1.37
CCM2-210ENST00000478169 WDR83OSQ9Y284 106 aa6.52□□□□□ -1.37
CCM2-210ENST00000478169 TIMM9Q9Y5J7 89 aa6.52□□□□□ -1.37
CCM2-210ENST00000478169 TRGV4A0A0C4DH28 118 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms