RNA–Protein interactions for RNA: ENST00000477949.1

USP33-208, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 2

Gene USP33, Length 663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-208ENST00000477949 IFT46Q9NQC8 304 aa4.02□□□□□ -1.77
USP33-208ENST00000477949 TP53TG3Q9ULZ0 132 aa4.02□□□□□ -1.77
USP33-208ENST00000477949 SYNE2Q8WXH0 6885 aaKnown RBP4.02□□□□□ -1.77
USP33-208ENST00000477949 TRAV8-3A0A0A6YYJ7 113 aa4.01□□□□□ -1.77
USP33-208ENST00000477949 KLLNB2CW77 178 aa4.01□□□□□ -1.77
USP33-208ENST00000477949 J3KRW8 73 aa4.01□□□□□ -1.77
USP33-208ENST00000477949 SDC2P34741 201 aa4.01□□□□□ -1.77
USP33-208ENST00000477949 AMTP48728 403 aa4.01□□□□□ -1.77
USP33-208ENST00000477949 ATP5IP56385 69 aaPredicted RBP4.01□□□□□ -1.77
USP33-208ENST00000477949 TSPAN5P62079 268 aa4.01□□□□□ -1.77
USP33-208ENST00000477949 SDIM1Q6ZPB5 146 aa4.01□□□□□ -1.77
USP33-208ENST00000477949 Q6ZQT7 251 aa4.01□□□□□ -1.77
USP33-208ENST00000477949 CCDC190Q86UF4 302 aa4.01□□□□□ -1.77
USP33-208ENST00000477949 CROCCP3Q8IVE0 287 aa4.01□□□□□ -1.77
USP33-208ENST00000477949 EIF4E3Q8N5X7 224 aaKnown RBP4.01□□□□□ -1.77
USP33-208ENST00000477949 HSD17B11Q8NBQ5 300 aa4.01□□□□□ -1.77
USP33-208ENST00000477949 ATP6V0E2Q8NHE4 81 aa4.01□□□□□ -1.77
USP33-208ENST00000477949 PCNPQ8WW12 178 aaKnown RBP4.01□□□□□ -1.77
USP33-208ENST00000477949 FAM19A4Q96LR4 140 aa4.01□□□□□ -1.77
USP33-208ENST00000477949 SHANK2-AS3Q9BTD1 123 aa4.01□□□□□ -1.77
USP33-208ENST00000477949 SLC25A31Q9H0C2 315 aa4.01□□□□□ -1.77
USP33-208ENST00000477949 ZNF331Q9NQX6 463 aaPredicted RBP4.01□□□□□ -1.77
USP33-208ENST00000477949 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.01□□□□□ -1.77
USP33-208ENST00000477949 SSR3Q9UNL2 185 aa4.01□□□□□ -1.77
USP33-208ENST00000477949 TMEM56-RWDD3S4R434 201 aa4.01□□□□□ -1.77
USP33-208ENST00000477949 TRGV4A0A0C4DH28 118 aa4□□□□□ -1.77
USP33-208ENST00000477949 C3orf85A0A1B0GTC6 90 aa4□□□□□ -1.77
USP33-208ENST00000477949 CDS2O95674 445 aa4□□□□□ -1.77
USP33-208ENST00000477949 CFDP00746 253 aaPredicted RBP4□□□□□ -1.77
USP33-208ENST00000477949 PRSS3P35030 304 aa4□□□□□ -1.77
USP33-208ENST00000477949 GPX4P36969 197 aaPredicted RBP4□□□□□ -1.77
USP33-208ENST00000477949 MEF2DQ14814 521 aa4□□□□□ -1.77
USP33-208ENST00000477949 SP6Q3SY56 376 aa4□□□□□ -1.77
USP33-208ENST00000477949 ATRAIDQ6UW56 229 aa4□□□□□ -1.77
USP33-208ENST00000477949 DAZ4Q86SG3 579 aaKnown RBP4□□□□□ -1.77
USP33-208ENST00000477949 LHFPL1Q86WI0 220 aa4□□□□□ -1.77
USP33-208ENST00000477949 C9orf163Q8N9P6 203 aa4□□□□□ -1.77
USP33-208ENST00000477949 GPX8Q8TED1 209 aa4□□□□□ -1.77
USP33-208ENST00000477949 SLC35E1Q96K37 410 aa4□□□□□ -1.77
USP33-208ENST00000477949 DPH3P1Q9H4G8 78 aa4□□□□□ -1.77
USP33-208ENST00000477949 DAZ3Q9NR90 486 aaKnown RBP4□□□□□ -1.77
USP33-208ENST00000477949 KIF25-AS1Q9Y6Z4 181 aa4□□□□□ -1.77
USP33-208ENST00000477949 U3KQ87 197 aa4□□□□□ -1.77
USP33-208ENST00000477949 TRAV8-6A0A0B4J262 113 aa3.99□□□□□ -1.77
USP33-208ENST00000477949 C7orf71A4D174 169 aa3.99□□□□□ -1.77
USP33-208ENST00000477949 CEBPZOSA8MTT3 80 aa3.99□□□□□ -1.77
USP33-208ENST00000477949 PRSS46E5RG02 174 aa3.99□□□□□ -1.77
USP33-208ENST00000477949 SLC17A3O00476 420 aa3.99□□□□□ -1.77
USP33-208ENST00000477949 PHOX2AO14813 284 aa3.99□□□□□ -1.77
USP33-208ENST00000477949 SLC25A5P05141 298 aaKnown RBP3.99□□□□□ -1.77
USP33-208ENST00000477949 FABP1P07148 127 aa3.99□□□□□ -1.77
USP33-208ENST00000477949 RPL7P18124 248 aaKnown RBP3.99□□□□□ -1.77
USP33-208ENST00000477949 ORM2P19652 201 aa3.99□□□□□ -1.77
USP33-208ENST00000477949 CXCL2P19875 107 aa3.99□□□□□ -1.77
USP33-208ENST00000477949 PPT1P50897 306 aa3.99□□□□□ -1.77
USP33-208ENST00000477949 PRR3P79522 188 aaKnown RBP3.99□□□□□ -1.77
USP33-208ENST00000477949 BTN1A1Q13410 526 aa3.99□□□□□ -1.77
USP33-208ENST00000477949 TRIM16LQ309B1 348 aa3.99□□□□□ -1.77
USP33-208ENST00000477949 OR10J3Q5JRS4 329 aa3.99□□□□□ -1.77
USP33-208ENST00000477949 PRR9Q5T870 116 aa3.99□□□□□ -1.77
USP33-208ENST00000477949 ACOT7LQ6ZUV0 252 aa3.99□□□□□ -1.77
USP33-208ENST00000477949 SH2D6Q7Z4S9 175 aa3.99□□□□□ -1.77
USP33-208ENST00000477949 OR10P1Q8NGE3 313 aa3.99□□□□□ -1.77
USP33-208ENST00000477949 RASL10AQ92737 203 aa3.99□□□□□ -1.77
USP33-208ENST00000477949 BLOC1S6Q9UL45 172 aa3.99□□□□□ -1.77
USP33-208ENST00000477949 NEBP20929 6669 aa3.98□□□□□ -1.77
USP33-208ENST00000477949 GATA1P15976 413 aaPredicted RBP3.98□□□□□ -1.77
USP33-208ENST00000477949 HLA-DMAP28067 261 aa3.98□□□□□ -1.77
USP33-208ENST00000477949 S100A7P31151 101 aa3.98□□□□□ -1.77
USP33-208ENST00000477949 LEPP41159 167 aa3.98□□□□□ -1.77
USP33-208ENST00000477949 PIGPP57054 158 aa3.98□□□□□ -1.77
USP33-208ENST00000477949 GABARAPL2P60520 117 aa3.98□□□□□ -1.77
USP33-208ENST00000477949 GGNBP1Q5YKI7 109 aa3.98□□□□□ -1.77
USP33-208ENST00000477949 LGI3Q8N145 548 aa3.98□□□□□ -1.77
USP33-208ENST00000477949 ZFAND1Q8TCF1 268 aa3.98□□□□□ -1.77
USP33-208ENST00000477949 GLYATL2Q8WU03 294 aa3.98□□□□□ -1.77
USP33-208ENST00000477949 TMEM147Q9BVK8 224 aa3.98□□□□□ -1.77
USP33-208ENST00000477949 HSPB7Q9UBY9 170 aa3.98□□□□□ -1.77
USP33-208ENST00000477949 TRAV8-1A0A0A6YYK1 113 aa3.97□□□□□ -1.77
USP33-208ENST00000477949 TEX13DA0A0J9YY54 714 aaPredicted RBP3.97□□□□□ -1.77
USP33-208ENST00000477949 PMS2P5A8MQ11 134 aa3.97□□□□□ -1.77
USP33-208ENST00000477949 GABARAPH6UMI1 98 aa3.97□□□□□ -1.77
USP33-208ENST00000477949 GABARAPO95166 117 aa3.97□□□□□ -1.77
USP33-208ENST00000477949 AQP4P55087 323 aa3.97□□□□□ -1.77
USP33-208ENST00000477949 PLP1P60201 277 aa3.97□□□□□ -1.77
USP33-208ENST00000477949 MXD1Q05195 221 aa3.97□□□□□ -1.77
USP33-208ENST00000477949 SRSF9Q13242 221 aaKnown RBP eCLIP3.97□□□□□ -1.77
USP33-208ENST00000477949 UBE2NLQ5JXB2 153 aa3.97□□□□□ -1.77
USP33-208ENST00000477949 FFAR4Q5NUL3 377 aa3.97□□□□□ -1.77
USP33-208ENST00000477949 GPR107Q5VW38 600 aa3.97□□□□□ -1.77
USP33-208ENST00000477949 STEAP1BQ6NZ63 245 aa3.97□□□□□ -1.77
USP33-208ENST00000477949 LCN15Q6UWW0 184 aa3.97□□□□□ -1.77
USP33-208ENST00000477949 PATE2Q6UY27 113 aa3.97□□□□□ -1.77
USP33-208ENST00000477949 ZFAND2AQ8N6M9 145 aa3.97□□□□□ -1.77
USP33-208ENST00000477949 NHLRC2Q8NBF2 726 aa3.97□□□□□ -1.77
USP33-208ENST00000477949 BPIFCQ8NFQ6 507 aa3.97□□□□□ -1.77
USP33-208ENST00000477949 TERB2Q8NHR7 220 aa3.97□□□□□ -1.77
USP33-208ENST00000477949 TMEM222Q9H0R3 208 aa3.97□□□□□ -1.77
USP33-208ENST00000477949 VAX2Q9UIW0 290 aa3.97□□□□□ -1.77
USP33-208ENST00000477949 IGKV2D-24A0A075B6R9 120 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms