RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 LINC00588Q9Y4M8 146 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 DOCK4Q8N1I0 1966 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 LOC285556D6RIA3 1793 aa1.75□□□□□ -2.13
XRN1-211ENST00000477237 PTPRDP23468 1912 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 IGHV1OR21-1A0A087WYE8 117 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 A0A0J9YXV3 536 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 TRBV27A0A0K0K1C4 114 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 FAM24AA6NFZ4 105 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 IGLL5B9A064 214 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 TMEM256-PLSCR3K7ERE1 68 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 PSPHP1O15172 72 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 NDUFB3O43676 98 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 OR1I1O60431 355 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 CST7O76096 145 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 IGKV1-5P01602 117 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 IGKCP01834 107 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 C1QAP02745 245 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 CD7P09564 240 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 COX6A1P12074 109 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 IGLL1P15814 213 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 LGALS3P17931 250 aaKnown RBP1.74□□□□□ -2.13
XRN1-211ENST00000477237 MPV17P39210 176 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 ZNF80P51504 273 aaPredicted RBP1.74□□□□□ -2.13
XRN1-211ENST00000477237 ZNF136P52737 540 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 IGLV3-21P80748 117 aaPredicted RBP1.74□□□□□ -2.13
XRN1-211ENST00000477237 MRPS36P82909 103 aaKnown RBP1.74□□□□□ -2.13
XRN1-211ENST00000477237 KIAA0087Q14695 138 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 CDK5R1Q15078 307 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 ATP1A1-AS1Q5TC04 95 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 LGALS9CQ6DKI2 356 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 AMN1Q8IY45 258 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 OR5AS1Q8N127 324 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 TMEM256Q8N2U0 113 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 ZNF491Q8N8L2 437 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 ZNRF1Q8ND25 227 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 MORN4Q8NDC4 146 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 OR8A1Q8NGG7 326 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 FAM57AQ8TBR7 257 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 C10orf105Q8TEF2 133 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 CHCHD10Q8WYQ3 142 aaPredicted RBP1.74□□□□□ -2.13
XRN1-211ENST00000477237 FGF13Q92913 245 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 PGLYRP4Q96LB8 373 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 ODF3Q96PU9 254 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 CCL13Q99616 98 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 CYSTM1Q9H1C7 97 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 DPH3P1Q9H4G8 78 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 PLEKHA3Q9HB20 300 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 MANBALQ9NQG1 85 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 XCL2Q9UBD3 114 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 F11RQ9Y624 299 aaKnown RBP1.74□□□□□ -2.13
XRN1-211ENST00000477237 SLIT1O75093 1534 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 C2orf16Q68DN1 1984 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 SCN8AQ9UQD0 1980 aa1.74□□□□□ -2.13
XRN1-211ENST00000477237 PAPPAQ13219 1627 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 RALGAPA2Q2PPJ7 1873 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 CPAMD8Q8IZJ3 1885 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 ATAD5Q96QE3 1844 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 MED1Q15648 1581 aaPredicted RBP1.73□□□□□ -2.13
XRN1-211ENST00000477237 IGKV1-27A0A075B6S5 117 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 TRAV9-1A0A075B6T8 112 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 TRBV5-4A0A0C4DH59 114 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 IGKV1-8A0A0C4DH67 115 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 IGKV1-9A0A0C4DH69 117 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 KLF18A0A0U1RQI7 1052 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 LOC389332A0A1B0GUA5 103 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 MDFIC2A0A1B0GVS7 189 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 hADV29S1A0JD25 119 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 RBMY1BA6NDE4 496 aaKnown RBP1.73□□□□□ -2.13
XRN1-211ENST00000477237 RBMY1EA6NEQ0 496 aaKnown RBP1.73□□□□□ -2.13
XRN1-211ENST00000477237 ZFP92A6NM28 416 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 C12orf77C9JDV5 145 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 K7EQD1 137 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 ATOX1O00244 68 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 SDCBPO00560 298 aaPredicted RBP1.73□□□□□ -2.13
XRN1-211ENST00000477237 COX7A2LO14548 114 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 UBE2L6O14933 153 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 ZNF324O75467 553 aaPredicted RBP1.73□□□□□ -2.13
XRN1-211ENST00000477237 IGHV3-9P01782 118 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 SRP19P09132 144 aaKnown RBP1.73□□□□□ -2.13
XRN1-211ENST00000477237 RBMY1DP0C7P1 496 aaKnown RBP1.73□□□□□ -2.13
XRN1-211ENST00000477237 C3orf79P0CE67 100 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 RBMY1A1P0DJD3 496 aaKnown RBP1.73□□□□□ -2.13
XRN1-211ENST00000477237 COX8AP10176 69 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 ZNF823P16415 610 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 IL3RAP26951 378 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 PSMB2P49721 201 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 DAPP51397 102 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 FUT5Q11128 374 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 Q1RN00 199 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 RSPO1Q2MKA7 263 aaPredicted RBP1.73□□□□□ -2.13
XRN1-211ENST00000477237 C6orf99Q4VX62 202 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 TMEM155Q4W5P6 130 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 ORMDL2Q53FV1 153 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 FAM219BQ5XKK7 198 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 C11orf71Q6IPW1 123 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 PRNTQ86SH4 94 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 CEND1Q8N111 149 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 CYB561D1Q8N8Q1 229 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 APCDD1LQ8NCL9 501 aa1.73□□□□□ -2.13
XRN1-211ENST00000477237 OR8B3Q8NGG8 313 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms