RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 ZNF688P0C7X2 276 aa21.63■■□□□ 1.05
VEGFA-211ENST00000476772 ANAPC16Q96DE5 110 aa21.63■■□□□ 1.05
VEGFA-211ENST00000476772 ZNF705DP0CH99 300 aaPredicted RBP21.62■■□□□ 1.05
VEGFA-211ENST00000476772 ZNF705BP0CI00 300 aaPredicted RBP21.62■■□□□ 1.05
VEGFA-211ENST00000476772 PRR27Q6MZM9 219 aa21.62■■□□□ 1.05
VEGFA-211ENST00000476772 RNASE7Q9H1E1 156 aaKnown RBP21.62■■□□□ 1.05
VEGFA-211ENST00000476772 ERVFC1-1P60608 527 aa21.61■■□□□ 1.05
VEGFA-211ENST00000476772 LINC00482Q8N8I6 264 aa21.61■■□□□ 1.05
VEGFA-211ENST00000476772 AGPAT4-IT1Q9H0P7 198 aa21.61■■□□□ 1.05
VEGFA-211ENST00000476772 TMEM242Q9NWH2 141 aa21.61■■□□□ 1.05
VEGFA-211ENST00000476772 H7BYZ3 331 aa21.6■■□□□ 1.05
VEGFA-211ENST00000476772 SNRPD3P62318 126 aaKnown RBP21.6■■□□□ 1.05
VEGFA-211ENST00000476772 PSMG4Q5JS54 123 aa21.6■■□□□ 1.05
VEGFA-211ENST00000476772 OR10G8Q8NGN5 311 aa21.6■■□□□ 1.05
VEGFA-211ENST00000476772 C8orf49Q96NF6 230 aa21.6■■□□□ 1.05
VEGFA-211ENST00000476772 F6UB75 175 aa21.6■■□□□ 1.05
VEGFA-211ENST00000476772 SAP30O75446 220 aa21.6■■□□□ 1.05
VEGFA-211ENST00000476772 C9orf47Q6ZRZ4 202 aa21.6■■□□□ 1.05
VEGFA-211ENST00000476772 SREK1IP1Q8N9Q2 155 aaPredicted RBP21.6■■□□□ 1.05
VEGFA-211ENST00000476772 PRR25Q96S07 402 aa21.6■■□□□ 1.05
VEGFA-211ENST00000476772 GPR61Q9BZJ8 451 aa21.6■■□□□ 1.05
VEGFA-211ENST00000476772 ZC2HC1AQ96GY0 325 aa21.59■■□□□ 1.05
VEGFA-211ENST00000476772 TRAV2A0A0B4J234 112 aa21.58■■□□□ 1.05
VEGFA-211ENST00000476772 PPP1R2P9O14990 202 aa21.58■■□□□ 1.05
VEGFA-211ENST00000476772 IBA57Q5T440 356 aaKnown RBP21.58■■□□□ 1.05
VEGFA-211ENST00000476772 TMEM78Q5T7P6 136 aa21.58■■□□□ 1.05
VEGFA-211ENST00000476772 LINC00322Q6ZN03 302 aaPredicted RBP21.58■■□□□ 1.05
VEGFA-211ENST00000476772 OR10J6PQ8NGY7 276 aa21.58■■□□□ 1.05
VEGFA-211ENST00000476772 IZUMO1RA6ND01 250 aa21.57■■□□□ 1.04
VEGFA-211ENST00000476772 SAPCD1Q5SSQ6 148 aa21.57■■□□□ 1.04
VEGFA-211ENST00000476772 OR8A1Q8NGG7 326 aa21.57■■□□□ 1.04
VEGFA-211ENST00000476772 TUBA4BQ9H853 241 aa21.57■■□□□ 1.04
VEGFA-211ENST00000476772 OSTCQ9NRP0 149 aa21.57■■□□□ 1.04
VEGFA-211ENST00000476772 TENM1Q9UKZ4 2725 aa21.57■■□□□ 1.04
VEGFA-211ENST00000476772 TRAV25A0A0B4J276 109 aa21.56■■□□□ 1.04
VEGFA-211ENST00000476772 C15orf54Q8N8G6 183 aa21.56■■□□□ 1.04
VEGFA-211ENST00000476772 NPIPB6E9PJ23 425 aa21.56■■□□□ 1.04
VEGFA-211ENST00000476772 ZNF138P52744 262 aa21.56■■□□□ 1.04
VEGFA-211ENST00000476772 HIST1H1AQ02539 215 aaPredicted RBP21.56■■□□□ 1.04
VEGFA-211ENST00000476772 NDFIP1Q9BT67 221 aa21.56■■□□□ 1.04
VEGFA-211ENST00000476772 BIN3Q9NQY0 253 aa21.56■■□□□ 1.04
VEGFA-211ENST00000476772 ZNF492Q9P255 531 aa21.56■■□□□ 1.04
VEGFA-211ENST00000476772 ATRQ13535 2644 aa21.55■■□□□ 1.04
VEGFA-211ENST00000476772 CXorf65A6NEN9 183 aa21.55■■□□□ 1.04
VEGFA-211ENST00000476772 FAM231DQ6ZW35 169 aa21.55■■□□□ 1.04
VEGFA-211ENST00000476772 SPAG8Q99932 426 aaPredicted RBP21.55■■□□□ 1.04
VEGFA-211ENST00000476772 URGCP-MRPS24S4R325 110 aa21.55■■□□□ 1.04
VEGFA-211ENST00000476772 V9GYV3 84 aa21.55■■□□□ 1.04
VEGFA-211ENST00000476772 NUDT10Q8NFP7 164 aa21.54■■□□□ 1.04
VEGFA-211ENST00000476772 NUDT11Q96G61 164 aa21.54■■□□□ 1.04
VEGFA-211ENST00000476772 C19orf71A6NCJ1 209 aa21.53■■□□□ 1.04
VEGFA-211ENST00000476772 GDF5OSQ5U4N7 250 aa21.53■■□□□ 1.04
VEGFA-211ENST00000476772 COX8CQ7Z4L0 72 aa21.53■■□□□ 1.04
VEGFA-211ENST00000476772 LINC00477Q96M19 166 aa21.53■■□□□ 1.04
VEGFA-211ENST00000476772 PPP1R14DQ9NXH3 145 aa21.53■■□□□ 1.04
VEGFA-211ENST00000476772 OR4C46A6NHA9 309 aa21.52■■□□□ 1.04
VEGFA-211ENST00000476772 IGLV1-51P01701 117 aa21.52■■□□□ 1.04
VEGFA-211ENST00000476772 YPEL4Q96NS1 127 aa21.52■■□□□ 1.04
VEGFA-211ENST00000476772 ZNF256Q9Y2P7 627 aaPredicted RBP21.52■■□□□ 1.04
VEGFA-211ENST00000476772 ZNF705GA8MUZ8 300 aaPredicted RBP21.51■■□□□ 1.03
VEGFA-211ENST00000476772 CT45A10P0DMU9 189 aa21.51■■□□□ 1.03
VEGFA-211ENST00000476772 CRIP1P50238 77 aa21.51■■□□□ 1.03
VEGFA-211ENST00000476772 ZNF747Q9BV97 191 aa21.51■■□□□ 1.03
VEGFA-211ENST00000476772 GATCO43716 136 aaKnown RBP21.5■■□□□ 1.03
VEGFA-211ENST00000476772 CD33P20138 364 aa21.5■■□□□ 1.03
VEGFA-211ENST00000476772 SPATA3Q8NHX4 192 aa21.5■■□□□ 1.03
VEGFA-211ENST00000476772 DEFB131AP59861 70 aa21.5■■□□□ 1.03
VEGFA-211ENST00000476772 ELOBQ15370 118 aa21.5■■□□□ 1.03
VEGFA-211ENST00000476772 SMUG1Q53HV7 270 aa21.5■■□□□ 1.03
VEGFA-211ENST00000476772 DAZAP1Q96EP5 407 aaKnown RBP21.5■■□□□ 1.03
VEGFA-211ENST00000476772 A0A0J9YX75 114 aa21.48■■□□□ 1.03
VEGFA-211ENST00000476772 COLCA2A8K830 154 aa21.48■■□□□ 1.03
VEGFA-211ENST00000476772 P01737 135 aa21.48■■□□□ 1.03
VEGFA-211ENST00000476772 PFN1P07737 140 aaKnown RBP21.48■■□□□ 1.03
VEGFA-211ENST00000476772 ZNF80P51504 273 aaPredicted RBP21.48■■□□□ 1.03
VEGFA-211ENST00000476772 MAP6D1Q9H9H5 199 aa21.48■■□□□ 1.03
VEGFA-211ENST00000476772 LENEPQ9Y5L5 61 aa21.48■■□□□ 1.03
VEGFA-211ENST00000476772 CA1P00915 261 aaPredicted RBP21.47■■□□□ 1.03
VEGFA-211ENST00000476772 SAV1Q9H4B6 383 aaPredicted RBP21.47■■□□□ 1.03
VEGFA-211ENST00000476772 IL36BQ9NZH7 164 aa21.47■■□□□ 1.03
VEGFA-211ENST00000476772 FBN1P35555 2871 aaKnown RBP21.47■■□□□ 1.03
VEGFA-211ENST00000476772 EBLN2Q6P2I7 272 aa21.47■■□□□ 1.03
VEGFA-211ENST00000476772 FOXI2Q6ZQN5 318 aa21.47■■□□□ 1.03
VEGFA-211ENST00000476772 OR2K2Q8NGT1 345 aa21.47■■□□□ 1.03
VEGFA-211ENST00000476772 SH2D1AO60880 128 aa21.46■■□□□ 1.03
VEGFA-211ENST00000476772 S100PP25815 95 aa21.46■■□□□ 1.03
VEGFA-211ENST00000476772 FAM162BQ5T6X4 162 aa21.46■■□□□ 1.03
VEGFA-211ENST00000476772 C3orf56Q8N813 242 aa21.46■■□□□ 1.03
VEGFA-211ENST00000476772 FAM19A4Q96LR4 140 aa21.46■■□□□ 1.03
VEGFA-211ENST00000476772 IMMP2LQ96T52 175 aa21.46■■□□□ 1.03
VEGFA-211ENST00000476772 RPP21Q9H633 154 aaKnown RBP21.46■■□□□ 1.03
VEGFA-211ENST00000476772 SORL1Q92673 2214 aa21.45■■□□□ 1.02
VEGFA-211ENST00000476772 FAM3BP58499 235 aaPredicted RBP21.45■■□□□ 1.02
VEGFA-211ENST00000476772 TMEM158Q8WZ71 300 aa21.45■■□□□ 1.02
VEGFA-211ENST00000476772 TGIF2-C20orf24A0A0A6YYL0 155 aa21.44■■□□□ 1.02
VEGFA-211ENST00000476772 CXCL1P09341 107 aa21.44■■□□□ 1.02
VEGFA-211ENST00000476772 KCNIP4Q6PIL6 250 aa21.44■■□□□ 1.02
VEGFA-211ENST00000476772 C12orf54Q6X4T0 127 aa21.44■■□□□ 1.02
VEGFA-211ENST00000476772 ZNF124Q15973 351 aa21.44■■□□□ 1.02
VEGFA-211ENST00000476772 ZFAND2AQ8N6M9 145 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms