RNA–Protein interactions for RNA: ENST00000476558.7

CCDC7-206, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 1,819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-206ENST00000476558 GPR61Q9BZJ8 451 aa17.51■□□□□ 0.39
CCDC7-206ENST00000476558 YAE1D1Q9NRH1 226 aa17.51■□□□□ 0.39
CCDC7-206ENST00000476558 SONP18583 2426 aaKnown RBP17.51■□□□□ 0.39
CCDC7-206ENST00000476558 HLA-DQA1P01909 254 aa17.5■□□□□ 0.39
CCDC7-206ENST00000476558 ERCC8Q13216 396 aa17.5■□□□□ 0.39
CCDC7-206ENST00000476558 C16orf92Q96LL3 132 aa17.5■□□□□ 0.39
CCDC7-206ENST00000476558 GDF5OSQ5U4N7 250 aa17.49■□□□□ 0.39
CCDC7-206ENST00000476558 RBPMS2Q6ZRY4 209 aaKnown RBP17.49■□□□□ 0.39
CCDC7-206ENST00000476558 UFC1Q9Y3C8 167 aa17.49■□□□□ 0.39
CCDC7-206ENST00000476558 FAM162BQ5T6X4 162 aa17.49■□□□□ 0.39
CCDC7-206ENST00000476558 C20orf173Q96LM9 149 aa17.49■□□□□ 0.39
CCDC7-206ENST00000476558 AGPAT4-IT1Q9H0P7 198 aa17.49■□□□□ 0.39
CCDC7-206ENST00000476558 ESM1Q9NQ30 184 aa17.49■□□□□ 0.39
CCDC7-206ENST00000476558 PPP1R14DQ9NXH3 145 aa17.49■□□□□ 0.39
CCDC7-206ENST00000476558 FAM181BA6NEQ2 426 aa17.48■□□□□ 0.39
CCDC7-206ENST00000476558 EDN2P20800 178 aa17.48■□□□□ 0.39
CCDC7-206ENST00000476558 C9orf47Q6ZRZ4 202 aa17.48■□□□□ 0.39
CCDC7-206ENST00000476558 KLHDC1Q8N7A1 406 aa17.48■□□□□ 0.39
CCDC7-206ENST00000476558 NRN1Q9NPD7 142 aa17.48■□□□□ 0.39
CCDC7-206ENST00000476558 ACANP16112 2415 aa17.47■□□□□ 0.39
CCDC7-206ENST00000476558 FASNP49327 2511 aaKnown RBP17.47■□□□□ 0.39
CCDC7-206ENST00000476558 SH2D1AO60880 128 aa17.47■□□□□ 0.39
CCDC7-206ENST00000476558 GZMBP10144 247 aa17.47■□□□□ 0.39
CCDC7-206ENST00000476558 ZNF80P51504 273 aaPredicted RBP17.47■□□□□ 0.39
CCDC7-206ENST00000476558 Q6ZSV7 163 aa17.47■□□□□ 0.39
CCDC7-206ENST00000476558 REC114Q7Z4M0 266 aa17.47■□□□□ 0.39
CCDC7-206ENST00000476558 TMEM213A2RRL7 107 aa17.47■□□□□ 0.39
CCDC7-206ENST00000476558 A8MWP6 167 aa17.47■□□□□ 0.39
CCDC7-206ENST00000476558 LGALS9O00182 355 aa17.47■□□□□ 0.39
CCDC7-206ENST00000476558 PGLYRP4Q96LB8 373 aa17.47■□□□□ 0.39
CCDC7-206ENST00000476558 IGHV4OR15-8A0A075B7B6 117 aa17.46■□□□□ 0.39
CCDC7-206ENST00000476558 A0A087WW49 117 aa17.46■□□□□ 0.39
CCDC7-206ENST00000476558 RAB4BP61018 213 aa17.46■□□□□ 0.39
CCDC7-206ENST00000476558 PDZD11Q5EBL8 140 aa17.46■□□□□ 0.39
CCDC7-206ENST00000476558 HECTD1Q9ULT8 2610 aa17.46■□□□□ 0.38
CCDC7-206ENST00000476558 NDFIP1Q9BT67 221 aa17.45■□□□□ 0.38
CCDC7-206ENST00000476558 TCTEX1D4Q5JR98 221 aa17.44■□□□□ 0.38
CCDC7-206ENST00000476558 TMEM160Q9NX00 188 aa17.44■□□□□ 0.38
CCDC7-206ENST00000476558 ANK3Q12955 4377 aaKnown RBP17.44■□□□□ 0.38
CCDC7-206ENST00000476558 ZNF138P52744 262 aa17.44■□□□□ 0.38
CCDC7-206ENST00000476558 SLAQ13239 276 aa17.44■□□□□ 0.38
CCDC7-206ENST00000476558 ZNF575Q86XF7 245 aa17.44■□□□□ 0.38
CCDC7-206ENST00000476558 HIST1H2BLQ99880 126 aa17.44■□□□□ 0.38
CCDC7-206ENST00000476558 TP53TG3Q9ULZ0 132 aa17.44■□□□□ 0.38
CCDC7-206ENST00000476558 APCSP02743 223 aa17.43■□□□□ 0.38
CCDC7-206ENST00000476558 BMI1P35226 326 aa17.43■□□□□ 0.38
CCDC7-206ENST00000476558 HBBP68871 147 aa17.43■□□□□ 0.38
CCDC7-206ENST00000476558 SRSF2Q01130 221 aaKnown RBP17.43■□□□□ 0.38
CCDC7-206ENST00000476558 Q0VG73 95 aa17.43■□□□□ 0.38
CCDC7-206ENST00000476558 MYO9AB2RTY4 2548 aa17.43■□□□□ 0.38
CCDC7-206ENST00000476558 GRIFINA4D1Z8 144 aa17.42■□□□□ 0.38
CCDC7-206ENST00000476558 HAX1O00165 279 aa17.42■□□□□ 0.38
CCDC7-206ENST00000476558 CRISP2P16562 243 aa17.42■□□□□ 0.38
CCDC7-206ENST00000476558 HOXD3P31249 432 aaPredicted RBP17.42■□□□□ 0.38
CCDC7-206ENST00000476558 TMEM78Q5T7P6 136 aa17.42■□□□□ 0.38
CCDC7-206ENST00000476558 A0A1B0GUS0 222 aa17.42■□□□□ 0.38
CCDC7-206ENST00000476558 TMEM189A5PLL7 270 aa17.42■□□□□ 0.38
CCDC7-206ENST00000476558 SMIM6P0DI80 62 aa17.42■□□□□ 0.38
CCDC7-206ENST00000476558 RPL11P62913 178 aaKnown RBP17.42■□□□□ 0.38
CCDC7-206ENST00000476558 C12orf57Q99622 126 aa17.42■□□□□ 0.38
CCDC7-206ENST00000476558 S100A2P29034 98 aa17.41■□□□□ 0.38
CCDC7-206ENST00000476558 CAMPP49913 170 aa17.41■□□□□ 0.38
CCDC7-206ENST00000476558 SYNJ2BPP57105 145 aa17.41■□□□□ 0.38
CCDC7-206ENST00000476558 KLF5Q13887 457 aaPredicted RBP17.41■□□□□ 0.38
CCDC7-206ENST00000476558 KIAA1644Q3SXP7 199 aa17.41■□□□□ 0.38
CCDC7-206ENST00000476558 Q6AWC8 147 aa17.41■□□□□ 0.38
CCDC7-206ENST00000476558 C18orf65Q6ZTR6 163 aa17.41■□□□□ 0.38
CCDC7-206ENST00000476558 TMEM256Q8N2U0 113 aa17.41■□□□□ 0.38
CCDC7-206ENST00000476558 ZNF738Q8NE65 137 aa17.41■□□□□ 0.38
CCDC7-206ENST00000476558 FABP5P3A8MUU1 101 aa17.4■□□□□ 0.38
CCDC7-206ENST00000476558 OVOL1O14753 267 aa17.4■□□□□ 0.38
CCDC7-206ENST00000476558 AMBPP02760 352 aa17.4■□□□□ 0.38
CCDC7-206ENST00000476558 FABP4P15090 132 aa17.4■□□□□ 0.38
CCDC7-206ENST00000476558 DCANP1Q8TF63 244 aa17.4■□□□□ 0.38
CCDC7-206ENST00000476558 LENEPQ9Y5L5 61 aa17.4■□□□□ 0.38
CCDC7-206ENST00000476558 LINC00310P59036 64 aa17.4■□□□□ 0.38
CCDC7-206ENST00000476558 A0A1B0GUT8 65 aa17.39■□□□□ 0.37
CCDC7-206ENST00000476558 NUPR1O60356 82 aa17.39■□□□□ 0.37
CCDC7-206ENST00000476558 OR10D4PQ8NGN7 298 aa17.39■□□□□ 0.37
CCDC7-206ENST00000476558 C4orf3Q8WVX3 66 aa17.39■□□□□ 0.37
CCDC7-206ENST00000476558 RNASE1P07998 156 aaKnown RBP17.38■□□□□ 0.37
CCDC7-206ENST00000476558 SAMD13Q5VXD3 122 aa17.38■□□□□ 0.37
CCDC7-206ENST00000476558 LINC00477Q96M19 166 aa17.38■□□□□ 0.37
CCDC7-206ENST00000476558 SSBP4Q9BWG4 385 aaPredicted RBP17.38■□□□□ 0.37
CCDC7-206ENST00000476558 ESDP10768 282 aa17.37■□□□□ 0.37
CCDC7-206ENST00000476558 RPS20P60866 119 aaKnown RBP17.37■□□□□ 0.37
CCDC7-206ENST00000476558 SCGB2A2Q13296 93 aa17.37■□□□□ 0.37
CCDC7-206ENST00000476558 OR10J3Q5JRS4 329 aa17.37■□□□□ 0.37
CCDC7-206ENST00000476558 GATD1Q8NB37 220 aa17.37■□□□□ 0.37
CCDC7-206ENST00000476558 SELENOKQ9Y6D0 94 aa17.37■□□□□ 0.37
CCDC7-206ENST00000476558 IGKV3-7A0A075B6H7 116 aa17.37■□□□□ 0.37
CCDC7-206ENST00000476558 ARMS2P0C7Q2 107 aa17.37■□□□□ 0.37
CCDC7-206ENST00000476558 ZNF705DP0CH99 300 aaPredicted RBP17.37■□□□□ 0.37
CCDC7-206ENST00000476558 ZNF705BP0CI00 300 aaPredicted RBP17.37■□□□□ 0.37
CCDC7-206ENST00000476558 SRD5A1P18405 259 aa17.37■□□□□ 0.37
CCDC7-206ENST00000476558 LINC01559Q495D7 138 aa17.37■□□□□ 0.37
CCDC7-206ENST00000476558 C2orf70A6NJV1 201 aa17.36■□□□□ 0.37
CCDC7-206ENST00000476558 SRIP30626 198 aa17.36■□□□□ 0.37
CCDC7-206ENST00000476558 WFDC12Q8WWY7 111 aa17.36■□□□□ 0.37
CCDC7-206ENST00000476558 PACRGQ96M98 296 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms