RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 MAP1LC3B2A6NCE7 125 aa10.96□□□□□ -0.65
SNX13-207ENST00000475800 RAB5CP51148 216 aa10.96□□□□□ -0.65
SNX13-207ENST00000475800 CD300CQ08708 224 aa10.96□□□□□ -0.65
SNX13-207ENST00000475800 SSX7Q7RTT5 188 aa10.96□□□□□ -0.65
SNX13-207ENST00000475800 IQCF2Q8IXL9 164 aa10.96□□□□□ -0.65
SNX13-207ENST00000475800 TMEM256Q8N2U0 113 aa10.96□□□□□ -0.65
SNX13-207ENST00000475800 C9orf62Q8N4C0 152 aa10.96□□□□□ -0.65
SNX13-207ENST00000475800 TMED6Q8WW62 240 aa10.96□□□□□ -0.65
SNX13-207ENST00000475800 TMEM208Q9BTX3 173 aa10.96□□□□□ -0.65
SNX13-207ENST00000475800 MAP1LC3BQ9GZQ8 125 aa10.96□□□□□ -0.65
SNX13-207ENST00000475800 X6R8D5 127 aa10.96□□□□□ -0.65
SNX13-207ENST00000475800 HYDINQ4G0P3 5121 aa10.95□□□□□ -0.66
SNX13-207ENST00000475800 TRBV7-9A0A0J9YWB2 115 aa10.95□□□□□ -0.66
SNX13-207ENST00000475800 SERTM2A0A1B0GWG4 89 aa10.95□□□□□ -0.66
SNX13-207ENST00000475800 A0A1W2PRE2 83 aa10.95□□□□□ -0.66
SNX13-207ENST00000475800 DIRC3C9JPN6 131 aa10.95□□□□□ -0.66
SNX13-207ENST00000475800 CRXO43186 299 aaPredicted RBP10.95□□□□□ -0.66
SNX13-207ENST00000475800 CT45A10P0DMU9 189 aa10.95□□□□□ -0.66
SNX13-207ENST00000475800 Q8NAQ8 132 aa10.95□□□□□ -0.66
SNX13-207ENST00000475800 C5orf17Q8NAS9 161 aa10.95□□□□□ -0.66
SNX13-207ENST00000475800 NKX6-2Q9C056 277 aaPredicted RBP10.95□□□□□ -0.66
SNX13-207ENST00000475800 AGPAT4-IT1Q9H0P7 198 aa10.95□□□□□ -0.66
SNX13-207ENST00000475800 IGHV3OR16-12A0A075B7B8 117 aa10.94□□□□□ -0.66
SNX13-207ENST00000475800 IGKV2-40A0A087WW87 121 aaPredicted RBP10.94□□□□□ -0.66
SNX13-207ENST00000475800 IGHV4-28A0A0C4DH34 117 aa10.94□□□□□ -0.66
SNX13-207ENST00000475800 TMEM189A5PLL7 270 aa10.94□□□□□ -0.66
SNX13-207ENST00000475800 IGKV2D-40P01614 121 aaPredicted RBP10.94□□□□□ -0.66
SNX13-207ENST00000475800 HBE1P02100 147 aa10.94□□□□□ -0.66
SNX13-207ENST00000475800 NMBP08949 121 aa10.94□□□□□ -0.66
SNX13-207ENST00000475800 PRB4P10163 310 aaPredicted RBP10.94□□□□□ -0.66
SNX13-207ENST00000475800 ERCC8Q13216 396 aa10.94□□□□□ -0.66
SNX13-207ENST00000475800 C1orf158Q8N1D5 194 aa10.94□□□□□ -0.66
SNX13-207ENST00000475800 FAM213BQ8TBF2 198 aa10.94□□□□□ -0.66
SNX13-207ENST00000475800 MBD3L1Q8WWY6 194 aa10.94□□□□□ -0.66
SNX13-207ENST00000475800 TRAV12-2A0A075B6T6 113 aa10.93□□□□□ -0.66
SNX13-207ENST00000475800 K7EQM0 130 aa10.93□□□□□ -0.66
SNX13-207ENST00000475800 CRISP2P16562 243 aa10.93□□□□□ -0.66
SNX13-207ENST00000475800 ZNF138P52744 262 aa10.93□□□□□ -0.66
SNX13-207ENST00000475800 FGF8P55075 233 aaPredicted RBP10.93□□□□□ -0.66
SNX13-207ENST00000475800 VGLL1Q99990 258 aa10.93□□□□□ -0.66
SNX13-207ENST00000475800 ZNF492Q9P255 531 aa10.93□□□□□ -0.66
SNX13-207ENST00000475800 LENEPQ9Y5L5 61 aa10.93□□□□□ -0.66
SNX13-207ENST00000475800 ARL2-SNX15V9GYD0 113 aa10.93□□□□□ -0.66
SNX13-207ENST00000475800 CSMD3Q7Z407 3707 aa10.93□□□□□ -0.66
SNX13-207ENST00000475800 DNAH1Q9P2D7 4330 aa10.93□□□□□ -0.66
SNX13-207ENST00000475800 H2AFB1P0C5Y9 115 aa10.92□□□□□ -0.66
SNX13-207ENST00000475800 FHITP49789 147 aa10.92□□□□□ -0.66
SNX13-207ENST00000475800 SUMO1P63165 101 aaKnown RBP10.92□□□□□ -0.66
SNX13-207ENST00000475800 RRN3P1Q2M238 152 aa10.92□□□□□ -0.66
SNX13-207ENST00000475800 SFT2D1Q8WV19 159 aa10.92□□□□□ -0.66
SNX13-207ENST00000475800 FAM19A4Q96LR4 140 aa10.92□□□□□ -0.66
SNX13-207ENST00000475800 LYSTQ99698 3801 aa10.92□□□□□ -0.66
SNX13-207ENST00000475800 PLA2G2EQ9NZK7 142 aa10.92□□□□□ -0.66
SNX13-207ENST00000475800 FBLL1A6NHQ2 334 aaKnown RBP10.91□□□□□ -0.66
SNX13-207ENST00000475800 KLLNB2CW77 178 aa10.91□□□□□ -0.66
SNX13-207ENST00000475800 TEX46H3BTG2 121 aa10.91□□□□□ -0.66
SNX13-207ENST00000475800 H7BYZ3 331 aa10.91□□□□□ -0.66
SNX13-207ENST00000475800 SULT1A2P50226 295 aa10.91□□□□□ -0.66
SNX13-207ENST00000475800 PPT1P50897 306 aa10.91□□□□□ -0.66
SNX13-207ENST00000475800 TAS2R60P59551 318 aa10.91□□□□□ -0.66
SNX13-207ENST00000475800 GFI1BQ5VTD9 330 aa10.91□□□□□ -0.66
SNX13-207ENST00000475800 GOLT1AQ6ZVE7 132 aa10.91□□□□□ -0.66
SNX13-207ENST00000475800 LINC01587Q99440 93 aa10.91□□□□□ -0.66
SNX13-207ENST00000475800 TMPRSS5Q9H3S3 457 aa10.91□□□□□ -0.66
SNX13-207ENST00000475800 RPH3ALQ9UNE2 315 aa10.91□□□□□ -0.66
SNX13-207ENST00000475800 TEX48A0A1B0GUV7 120 aa10.9□□□□□ -0.66
SNX13-207ENST00000475800 C7orf71A4D174 169 aa10.9□□□□□ -0.66
SNX13-207ENST00000475800 GGTLC3B5MD39 225 aa10.9□□□□□ -0.66
SNX13-207ENST00000475800 GPX1P07203 203 aa10.9□□□□□ -0.66
SNX13-207ENST00000475800 RBMY1A1P0DJD3 496 aaKnown RBP10.9□□□□□ -0.66
SNX13-207ENST00000475800 RBMY1CP0DJD4 496 aa10.9□□□□□ -0.66
SNX13-207ENST00000475800 RBMY1FQ15415 496 aaKnown RBP10.9□□□□□ -0.66
SNX13-207ENST00000475800 C11orf45Q8TAV5 145 aa10.9□□□□□ -0.66
SNX13-207ENST00000475800 TCEAL7Q9BRU2 100 aa10.9□□□□□ -0.66
SNX13-207ENST00000475800 NIPSNAP3BQ9BS92 247 aa10.9□□□□□ -0.66
SNX13-207ENST00000475800 EPDR1Q9UM22 224 aa10.9□□□□□ -0.66
SNX13-207ENST00000475800 BIRC6Q9NR09 4857 aa10.9□□□□□ -0.67
SNX13-207ENST00000475800 TRAV1-1A0A0B4J248 108 aa10.89□□□□□ -0.67
SNX13-207ENST00000475800 LOC102723971A0A1B0GUV8 181 aa10.89□□□□□ -0.67
SNX13-207ENST00000475800 FAM74A7A6NL05 159 aa10.89□□□□□ -0.67
SNX13-207ENST00000475800 DEFB4AO15263 64 aa10.89□□□□□ -0.67
SNX13-207ENST00000475800 TCRAP04437 139 aa10.89□□□□□ -0.67
SNX13-207ENST00000475800 UBE2G2P60604 165 aa10.89□□□□□ -0.67
SNX13-207ENST00000475800 CYB561D1Q8N8Q1 229 aa10.89□□□□□ -0.67
SNX13-207ENST00000475800 ATG101Q9BSB4 218 aa10.89□□□□□ -0.67
SNX13-207ENST00000475800 F6UZH7 168 aa10.88□□□□□ -0.67
SNX13-207ENST00000475800 J3KRW8 73 aa10.88□□□□□ -0.67
SNX13-207ENST00000475800 IFNA7P01567 189 aa10.88□□□□□ -0.67
SNX13-207ENST00000475800 GNG5P63218 68 aa10.88□□□□□ -0.67
SNX13-207ENST00000475800 ZNF493Q6ZR52 646 aa10.88□□□□□ -0.67
SNX13-207ENST00000475800 ZFAND2AQ8N6M9 145 aa10.88□□□□□ -0.67
SNX13-207ENST00000475800 Q8TAT8 98 aa10.88□□□□□ -0.67
SNX13-207ENST00000475800 HIST1H2BAQ96A08 127 aa10.88□□□□□ -0.67
SNX13-207ENST00000475800 PYGO2Q9BRQ0 406 aa10.88□□□□□ -0.67
SNX13-207ENST00000475800 NDFIP1Q9BT67 221 aa10.88□□□□□ -0.67
SNX13-207ENST00000475800 YTHDF2Q9Y5A9 579 aaKnown RBP10.88□□□□□ -0.67
SNX13-207ENST00000475800 TRAV12-3A0A0B4J271 114 aa10.87□□□□□ -0.67
SNX13-207ENST00000475800 CXorf65A6NEN9 183 aa10.87□□□□□ -0.67
SNX13-207ENST00000475800 RNASE4P34096 147 aaKnown RBP10.87□□□□□ -0.67
SNX13-207ENST00000475800 NKX2-5P52952 324 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 198.7 ms